RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 PDE6AP16499 860 aa11.55□□□□□ -0.56
SIX1-204ENST00000555627 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
SIX1-204ENST00000555627 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
SIX1-204ENST00000555627 APPBP2Q92624 585 aa11.55□□□□□ -0.56
SIX1-204ENST00000555627 BCS1LQ9Y276 419 aa11.55□□□□□ -0.56
SIX1-204ENST00000555627 ZFYP08048 801 aaPredicted RBP11.54□□□□□ -0.56
SIX1-204ENST00000555627 KCNA3P22001 575 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 KCNJ4P48050 445 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 TTF1Q15361 905 aaPredicted RBP11.54□□□□□ -0.56
SIX1-204ENST00000555627 VPS53Q5VIR6 699 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 TDRD7Q8NHU6 1098 aaKnown RBP11.54□□□□□ -0.56
SIX1-204ENST00000555627 IPO9Q96P70 1041 aaKnown RBP11.54□□□□□ -0.56
SIX1-204ENST00000555627 HELLSQ9NRZ9 838 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 ANKIB1Q9P2G1 1089 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 GGA1Q9UJY5 639 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
SIX1-204ENST00000555627 TAF6LQ9Y6J9 622 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 SALL1Q9NSC2 1324 aa11.54□□□□□ -0.56
SIX1-204ENST00000555627 HIBADHP31937 336 aaKnown RBP11.53□□□□□ -0.56
SIX1-204ENST00000555627 COL9A3Q14050 684 aaPredicted RBP11.53□□□□□ -0.56
SIX1-204ENST00000555627 UBE3CQ15386 1083 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 ADGRA1Q86SQ6 560 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 RASEFQ8IZ41 740 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 MAP4K1Q92918 833 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 PUS7LQ9H0K6 701 aaKnown RBP11.53□□□□□ -0.56
SIX1-204ENST00000555627 DENND2AQ9ULE3 1009 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 SNX14Q9Y5W7 946 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 ZNF532Q9HCE3 1301 aa11.53□□□□□ -0.56
SIX1-204ENST00000555627 H0YIN7 160 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 DLL1O00548 723 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 IDH1O75874 414 aaKnown RBP11.52□□□□□ -0.57
SIX1-204ENST00000555627 IL1R1P14778 569 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 ALDH1B1P30837 517 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 ANAPC15P60006 121 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 NECTIN1Q15223 517 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 CAVIN4Q5BKX8 364 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 ZNF622Q969S3 477 aaKnown RBP eCLIP11.52□□□□□ -0.57
SIX1-204ENST00000555627 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
SIX1-204ENST00000555627 NSFL1CQ9UNZ2 370 aaKnown RBP11.52□□□□□ -0.57
SIX1-204ENST00000555627 GREB1LQ9C091 1923 aaPredicted RBP11.51□□□□□ -0.57
SIX1-204ENST00000555627 MYH15Q9Y2K3 1946 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 A0A0G2JLW4 131 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 GPAA1O43292 621 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 DPEP1P16444 411 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 PRDX5P30044 214 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 VEGFBP49765 207 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 RABEP1Q15276 862 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 GRIK5Q16478 980 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 CREB3L3Q68CJ9 461 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 ZNF804AQ7Z570 1209 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 MAGEB6Q8N7X4 407 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 SNX21Q969T3 373 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 DSCC1Q9BVC3 393 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 RTFDC1Q9BY42 306 aaPredicted RBP11.51□□□□□ -0.57
SIX1-204ENST00000555627 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.57
SIX1-204ENST00000555627 EPB41L4AQ9HCS5 686 aaPredicted RBP11.51□□□□□ -0.57
SIX1-204ENST00000555627 CD209Q9NNX6 404 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 GNL3LQ9NVN8 582 aaKnown RBP11.51□□□□□ -0.57
SIX1-204ENST00000555627 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
SIX1-204ENST00000555627 SLC27A2O14975 620 aa11.5□□□□□ -0.57
SIX1-204ENST00000555627 SLC9C2Q5TAH2 1124 aa11.5□□□□□ -0.57
SIX1-204ENST00000555627 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
SIX1-204ENST00000555627 JAG2Q9Y219 1238 aa11.5□□□□□ -0.57
SIX1-204ENST00000555627 ZMYM6O95789 1325 aa11.5□□□□□ -0.57
SIX1-204ENST00000555627 FAM205AQ6ZU69 1335 aa11.5□□□□□ -0.57
SIX1-204ENST00000555627 HSPD1P10809 573 aaKnown RBP11.49□□□□□ -0.57
SIX1-204ENST00000555627 VEGFAP15692 232 aaPredicted RBP11.49□□□□□ -0.57
SIX1-204ENST00000555627 MCCP23508 829 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 MAP3K12Q12852 859 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
SIX1-204ENST00000555627 LRRFIP1Q32MZ4 808 aaKnown RBP11.49□□□□□ -0.57
SIX1-204ENST00000555627 ADCK5Q3MIX3 580 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 ZSCAN25Q6NSZ9 544 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 DPP8Q6V1X1 898 aaPredicted RBP11.49□□□□□ -0.57
SIX1-204ENST00000555627 STOX1Q6ZVD7 989 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 VPS37DQ86XT2 251 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 LCORLQ8N3X6 602 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 MPNDQ8N594 471 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 NSUN4Q96CB9 384 aaKnown RBP11.49□□□□□ -0.57
SIX1-204ENST00000555627 TTC14Q96N46 770 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
SIX1-204ENST00000555627 MBD4O95243 580 aa11.48□□□□□ -0.57
SIX1-204ENST00000555627 CYP21A2P08686 494 aa11.48□□□□□ -0.57
SIX1-204ENST00000555627 WASHC4Q2M389 1173 aa11.48□□□□□ -0.57
SIX1-204ENST00000555627 KIAA1211Q6ZU35 1233 aa11.48□□□□□ -0.57
SIX1-204ENST00000555627 RIOK1Q9BRS2 568 aaKnown RBP11.48□□□□□ -0.57
SIX1-204ENST00000555627 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
SIX1-204ENST00000555627 MYH6P13533 1939 aa11.48□□□□□ -0.57
SIX1-204ENST00000555627 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 MECOMQ03112 1051 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 TSGA10IPQ3SY00 556 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 TTLL5Q6EMB2 1281 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 CERS5Q8N5B7 392 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 SP7Q8TDD2 431 aaPredicted RBP11.47□□□□□ -0.57
SIX1-204ENST00000555627 STRBPQ96SI9 672 aaKnown RBP11.47□□□□□ -0.57
SIX1-204ENST00000555627 MCOLN1Q9GZU1 580 aa11.47□□□□□ -0.57
SIX1-204ENST00000555627 COA1Q9GZY4 146 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms