RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 RBM5P52756 815 aaKnown RBP eCLIP16.76■□□□□ 0.27
TUBB3-208ENST00000555576 CRHR2Q13324 411 aa16.76■□□□□ 0.27
TUBB3-208ENST00000555576 TNFAIP1Q13829 316 aa16.76■□□□□ 0.27
TUBB3-208ENST00000555576 FBXO33Q7Z6M2 555 aa16.76■□□□□ 0.27
TUBB3-208ENST00000555576 DZIP1LQ8IYY4 767 aaKnown RBP16.76■□□□□ 0.27
TUBB3-208ENST00000555576 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
TUBB3-208ENST00000555576 CRKP46108 304 aa16.75■□□□□ 0.27
TUBB3-208ENST00000555576 LRRC24Q50LG9 513 aa16.75■□□□□ 0.27
TUBB3-208ENST00000555576 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-208ENST00000555576 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
TUBB3-208ENST00000555576 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
TUBB3-208ENST00000555576 MRPL50Q8N5N7 158 aaKnown RBP16.74■□□□□ 0.27
TUBB3-208ENST00000555576 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
TUBB3-208ENST00000555576 OPTNQ96CV9 577 aa16.74■□□□□ 0.27
TUBB3-208ENST00000555576 TMEM39BQ9GZU3 492 aa16.74■□□□□ 0.27
TUBB3-208ENST00000555576 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-208ENST00000555576 VGLL4Q14135 290 aa16.73■□□□□ 0.27
TUBB3-208ENST00000555576 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.73■□□□□ 0.274e-7■■□□□ 11.9
TUBB3-208ENST00000555576 ELP3Q9H9T3 547 aa16.73■□□□□ 0.27
TUBB3-208ENST00000555576 TCP10L2B9ZVM9 353 aa16.72■□□□□ 0.27
TUBB3-208ENST00000555576 PDE8BO95263 885 aa16.72■□□□□ 0.27
TUBB3-208ENST00000555576 HDLBPQ00341 1268 aaKnown RBP16.72■□□□□ 0.27
TUBB3-208ENST00000555576 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
TUBB3-208ENST00000555576 CD99L2Q8TCZ2 262 aa16.72■□□□□ 0.27
TUBB3-208ENST00000555576 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-208ENST00000555576 PTPN22Q9Y2R2 807 aa16.72■□□□□ 0.27
TUBB3-208ENST00000555576 KIF16BQ96L93 1317 aa16.71■□□□□ 0.27
TUBB3-208ENST00000555576 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-208ENST00000555576 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
TUBB3-208ENST00000555576 BRI3BPQ8WY22 251 aa16.71■□□□□ 0.27
TUBB3-208ENST00000555576 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
TUBB3-208ENST00000555576 KIAA0100Q14667 2235 aaKnown RBP16.71■□□□□ 0.27
TUBB3-208ENST00000555576 PTPRCP08575 1304 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 POTEFA5A3E0 1075 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 FGFR2P21802 821 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 METTL24Q5JXM2 366 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 OTUD7BQ6GQQ9 843 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 TBC1D22AQ8WUA7 517 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 ARMC5Q96C12 935 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 ZDHHC15Q96MV8 337 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 USP44Q9H0E7 712 aa16.7■□□□□ 0.26
TUBB3-208ENST00000555576 RPAP1Q9BWH6 1393 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-208ENST00000555576 RFX5P48382 616 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-208ENST00000555576 BCAMP50895 628 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 CACNB3P54284 484 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 MAP3K9P80192 1104 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 SP3Q02447 781 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
TUBB3-208ENST00000555576 APOBEC3HQ6NTF7 200 aaKnown RBP16.69■□□□□ 0.26
TUBB3-208ENST00000555576 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 PCDH10Q9P2E7 1040 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
TUBB3-208ENST00000555576 MYH13Q9UKX3 1938 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 SPDYE5A6NIY4 337 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 TNNI2P48788 182 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
TUBB3-208ENST00000555576 FAM83AQ86UY5 434 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 FAM43AQ8N2R8 423 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 TEKT1Q969V4 418 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 ZSWIM8A7E2V4 1837 aa16.68■□□□□ 0.26
TUBB3-208ENST00000555576 CCL15-CCL14A0A0B4J2E2 113 aa16.67■□□□□ 0.26
TUBB3-208ENST00000555576 PUM3Q15397 648 aaKnown RBP16.67■□□□□ 0.26
TUBB3-208ENST00000555576 CCL15Q16663 113 aa16.67■□□□□ 0.26
TUBB3-208ENST00000555576 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
TUBB3-208ENST00000555576 OTUD5Q96G74 571 aa16.67■□□□□ 0.26
TUBB3-208ENST00000555576 EFCC1Q9HA90 598 aa16.67■□□□□ 0.26
TUBB3-208ENST00000555576 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
TUBB3-208ENST00000555576 GTF2A2P52657 109 aa16.66■□□□□ 0.26
TUBB3-208ENST00000555576 E9PSI1 815 aa16.65■□□□□ 0.26
TUBB3-208ENST00000555576 TAF1CQ15572 869 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-208ENST00000555576 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
TUBB3-208ENST00000555576 ZNF333Q96JL9 665 aa16.65■□□□□ 0.26
TUBB3-208ENST00000555576 CSADQ9Y600 493 aa16.65■□□□□ 0.26
TUBB3-208ENST00000555576 MAST3O60307 1309 aa16.65■□□□□ 0.26
TUBB3-208ENST00000555576 EYA2O00167 538 aa16.64■□□□□ 0.25
TUBB3-208ENST00000555576 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
TUBB3-208ENST00000555576 HHIPL2Q6UWX4 724 aa16.64■□□□□ 0.25
TUBB3-208ENST00000555576 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
TUBB3-208ENST00000555576 WRNIP1Q96S55 665 aa16.64■□□□□ 0.25
TUBB3-208ENST00000555576 IRF6O14896 467 aa16.63■□□□□ 0.25
TUBB3-208ENST00000555576 FRAT2O75474 233 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-208ENST00000555576 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
TUBB3-208ENST00000555576 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
TUBB3-208ENST00000555576 ERO1BQ86YB8 467 aa16.63■□□□□ 0.25
TUBB3-208ENST00000555576 ZFYVE28Q9HCC9 887 aa16.63■□□□□ 0.25
TUBB3-208ENST00000555576 ZCCHC17Q9NP64 241 aaKnown RBP16.63■□□□□ 0.25
TUBB3-208ENST00000555576 BTBD19C9JJ37 291 aa16.62■□□□□ 0.25
TUBB3-208ENST00000555576 TLR2O60603 784 aa16.62■□□□□ 0.25
TUBB3-208ENST00000555576 EN2P19622 333 aaPredicted RBP16.62■□□□□ 0.25
TUBB3-208ENST00000555576 PPIL2Q13356 520 aa16.62■□□□□ 0.25
TUBB3-208ENST00000555576 LPIN2Q92539 896 aa16.62■□□□□ 0.25
TUBB3-208ENST00000555576 DAGLAQ9Y4D2 1042 aa16.62■□□□□ 0.25
TUBB3-208ENST00000555576 PTCH2Q9Y6C5 1203 aa16.62■□□□□ 0.25
TUBB3-208ENST00000555576 CETPP11597 493 aa16.61■□□□□ 0.25
TUBB3-208ENST00000555576 SLC5A1P13866 664 aa16.61■□□□□ 0.25
TUBB3-208ENST00000555576 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
TUBB3-208ENST00000555576 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms