RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 REM2Q8IYK8 340 aaPredicted RBP30.4■■■□□ 2.46
PRKCH-216ENST00000555542 DZIP1LQ8IYY4 767 aaKnown RBP30.4■■■□□ 2.46
PRKCH-216ENST00000555542 TDRD3Q9H7E2 651 aaKnown RBP30.4■■■□□ 2.46
PRKCH-216ENST00000555542 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.4■■■□□ 2.46
PRKCH-216ENST00000555542 PPP1R12BO60237 982 aaPredicted RBP30.39■■■□□ 2.46
PRKCH-216ENST00000555542 GRIK5Q16478 980 aa30.39■■■□□ 2.46
PRKCH-216ENST00000555542 SPDYE2Q495Y8 402 aa30.39■■■□□ 2.46
PRKCH-216ENST00000555542 CSRNP1Q96S65 589 aa30.39■■■□□ 2.46
PRKCH-216ENST00000555542 COPRSQ9NQ92 184 aa30.39■■■□□ 2.46
PRKCH-216ENST00000555542 ZNF70Q9UC06 446 aaPredicted RBP30.39■■■□□ 2.46
PRKCH-216ENST00000555542 TRPA1O75762 1119 aa30.38■■■□□ 2.45
PRKCH-216ENST00000555542 MKRN3Q13064 507 aaKnown RBP30.38■■■□□ 2.45
PRKCH-216ENST00000555542 RASA3Q14644 834 aa30.38■■■□□ 2.45
PRKCH-216ENST00000555542 TEKT1Q969V4 418 aa30.38■■■□□ 2.45
PRKCH-216ENST00000555542 GNL3LQ9NVN8 582 aaKnown RBP30.38■■■□□ 2.45
PRKCH-216ENST00000555542 SAGE1Q9NXZ1 904 aa30.38■■■□□ 2.45
PRKCH-216ENST00000555542 FZD1Q9UP38 647 aa30.38■■■□□ 2.45
PRKCH-216ENST00000555542 MAST3O60307 1309 aa30.38■■■□□ 2.45
PRKCH-216ENST00000555542 GNAI2P04899 355 aa30.37■■■□□ 2.45
PRKCH-216ENST00000555542 RNF186Q9NXI6 227 aa30.37■■■□□ 2.45
PRKCH-216ENST00000555542 WDR66Q8TBY9 1149 aa30.36■■■□□ 2.45
PRKCH-216ENST00000555542 ZBED9Q6R2W3 1325 aa30.36■■■□□ 2.45
PRKCH-216ENST00000555542 CASP8AP2Q9UKL3 1982 aa30.35■■■□□ 2.45
PRKCH-216ENST00000555542 TNNI2P48788 182 aa30.35■■■□□ 2.45
PRKCH-216ENST00000555542 HDLBPQ00341 1268 aaKnown RBP30.35■■■□□ 2.45
PRKCH-216ENST00000555542 NBPF12Q5TAG4 269 aaPredicted RBP30.35■■■□□ 2.45
PRKCH-216ENST00000555542 FTSJ3Q8IY81 847 aaKnown RBP30.35■■■□□ 2.45
PRKCH-216ENST00000555542 SUGT1Q9Y2Z0 365 aa30.35■■■□□ 2.45
PRKCH-216ENST00000555542 TCP10L2B9ZVM9 353 aa30.34■■■□□ 2.45
PRKCH-216ENST00000555542 TMEM57Q8N5G2 664 aa30.34■■■□□ 2.45
PRKCH-216ENST00000555542 SSC5DA1L4H1 1573 aa30.33■■■□□ 2.45
PRKCH-216ENST00000555542 TMOD2Q9NZR1 351 aa30.33■■■□□ 2.45
PRKCH-216ENST00000555542 IREB2P48200 963 aaKnown RBP30.32■■■□□ 2.44
PRKCH-216ENST00000555542 MTX1Q13505 466 aa30.32■■■□□ 2.44
PRKCH-216ENST00000555542 LDLRAD1Q5T700 205 aa30.32■■■□□ 2.44
PRKCH-216ENST00000555542 SLC10A4Q96EP9 437 aa30.32■■■□□ 2.44
PRKCH-216ENST00000555542 SREBF2Q12772 1141 aa30.3■■■□□ 2.44
PRKCH-216ENST00000555542 MAP3K11Q16584 847 aa30.3■■■□□ 2.44
PRKCH-216ENST00000555542 ZDHHC15Q96MV8 337 aa30.3■■■□□ 2.44
PRKCH-216ENST00000555542 DENND2AQ9ULE3 1009 aa30.3■■■□□ 2.44
PRKCH-216ENST00000555542 AKAP2Q9Y2D5 859 aa30.3■■■□□ 2.44
PRKCH-216ENST00000555542 ADORA1P30542 326 aa30.29■■■□□ 2.44
PRKCH-216ENST00000555542 PHKA1P46020 1223 aa30.29■■■□□ 2.44
PRKCH-216ENST00000555542 ABHD8Q96I13 439 aa30.29■■■□□ 2.44
PRKCH-216ENST00000555542 CACNB3P54284 484 aa30.28■■■□□ 2.44
PRKCH-216ENST00000555542 TFCP2Q12800 502 aa30.28■■■□□ 2.44
PRKCH-216ENST00000555542 MRIQ9BWK5 157 aa30.28■■■□□ 2.44
PRKCH-216ENST00000555542 TMEM39BQ9GZU3 492 aa30.28■■■□□ 2.44
PRKCH-216ENST00000555542 SEMA3EO15041 775 aa30.27■■■□□ 2.44
PRKCH-216ENST00000555542 TIMM10P62072 90 aa30.27■■■□□ 2.44
PRKCH-216ENST00000555542 SPRYD7Q5W111 196 aa30.27■■■□□ 2.44
PRKCH-216ENST00000555542 CCDC102BQ68D86 513 aa30.27■■■□□ 2.44
PRKCH-216ENST00000555542 HHIPL2Q6UWX4 724 aa30.27■■■□□ 2.44
PRKCH-216ENST00000555542 ITPRIPQ8IWB1 547 aa30.27■■■□□ 2.44
PRKCH-216ENST00000555542 CLMNQ96JQ2 1002 aa30.27■■■□□ 2.44
PRKCH-216ENST00000555542 A0A1B0GUL7 405 aa30.26■■■□□ 2.43
PRKCH-216ENST00000555542 LDHBP07195 334 aaKnown RBP30.26■■■□□ 2.43
PRKCH-216ENST00000555542 G3BP1Q13283 466 aaKnown RBP eCLIP30.26■■■□□ 2.43
PRKCH-216ENST00000555542 PNMA6EA0A0J9YXQ4 647 aa30.25■■■□□ 2.43
PRKCH-216ENST00000555542 USP2O75604 605 aaPredicted RBP30.25■■■□□ 2.43
PRKCH-216ENST00000555542 DGKZQ13574 1117 aa30.25■■■□□ 2.43
PRKCH-216ENST00000555542 ANKRD13AQ8IZ07 590 aa30.25■■■□□ 2.43
PRKCH-216ENST00000555542 NEUROD6Q96NK8 337 aa30.25■■■□□ 2.43
PRKCH-216ENST00000555542 UNCXA6NJT0 531 aa30.24■■■□□ 2.43
PRKCH-216ENST00000555542 PRDX5P30044 214 aa30.24■■■□□ 2.43
PRKCH-216ENST00000555542 TM4SF4P48230 202 aa30.24■■■□□ 2.43
PRKCH-216ENST00000555542 APOBEC3HQ6NTF7 200 aaKnown RBP30.24■■■□□ 2.43
PRKCH-216ENST00000555542 CDAN1Q8IWY9 1227 aa30.24■■■□□ 2.43
PRKCH-216ENST00000555542 MVPQ14764 893 aaKnown RBP30.23■■■□□ 2.43
PRKCH-216ENST00000555542 GORABQ5T7V8 394 aa30.23■■■□□ 2.43
PRKCH-216ENST00000555542 ZGPATQ8N5A5 531 aaKnown RBP30.23■■■□□ 2.43
PRKCH-216ENST00000555542 XAGE2Q96GT9 111 aa30.23■■■□□ 2.43
PRKCH-216ENST00000555542 WNK4Q96J92 1243 aa30.23■■■□□ 2.43
PRKCH-216ENST00000555542 TEPSINQ96N21 525 aa30.23■■■□□ 2.43
PRKCH-216ENST00000555542 MANSC4A6NHS7 340 aaPredicted RBP30.22■■■□□ 2.43
PRKCH-216ENST00000555542 ZBTB48P10074 688 aaPredicted RBP30.22■■■□□ 2.43
PRKCH-216ENST00000555542 DIXDC1Q155Q3 683 aa30.22■■■□□ 2.43
PRKCH-216ENST00000555542 MCOLN1Q9GZU1 580 aa30.22■■■□□ 2.43
PRKCH-216ENST00000555542 SALL1Q9NSC2 1324 aa30.22■■■□□ 2.43
PRKCH-216ENST00000555542 OTOFQ9HC10 1997 aa30.21■■■□□ 2.43
PRKCH-216ENST00000555542 TBC1D8O95759 1140 aa30.21■■■□□ 2.43
PRKCH-216ENST00000555542 C1orf115Q9H7X2 142 aa30.21■■■□□ 2.43
PRKCH-216ENST00000555542 OS9Q13438 667 aaPredicted RBP30.2■■■□□ 2.43
PRKCH-216ENST00000555542 RASGRF1Q13972 1273 aa30.2■■■□□ 2.43
PRKCH-216ENST00000555542 FAM83AQ86UY5 434 aa30.2■■■□□ 2.43
PRKCH-216ENST00000555542 ABCF2Q9UG63 623 aa30.2■■■□□ 2.43
PRKCH-216ENST00000555542 DAGLAQ9Y4D2 1042 aa30.2■■■□□ 2.43
PRKCH-216ENST00000555542 FKBP1CQ5VVH2 108 aa30.19■■■□□ 2.42
PRKCH-216ENST00000555542 DZIP1Q86YF9 867 aaKnown RBP30.19■■■□□ 2.42
PRKCH-216ENST00000555542 HOOK2Q96ED9 719 aa30.19■■■□□ 2.42
PRKCH-216ENST00000555542 ELP3Q9H9T3 547 aa30.19■■■□□ 2.42
PRKCH-216ENST00000555542 CCDC85CA6NKD9 419 aa30.18■■■□□ 2.42
PRKCH-216ENST00000555542 RLBP1P12271 317 aa30.18■■■□□ 2.42
PRKCH-216ENST00000555542 INHBEP58166 350 aa30.18■■■□□ 2.42
PRKCH-216ENST00000555542 CSADQ9Y600 493 aa30.18■■■□□ 2.42
PRKCH-216ENST00000555542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.17■■■□□ 2.42
PRKCH-216ENST00000555542 ALDH1A1P00352 501 aa30.16■■■□□ 2.42
PRKCH-216ENST00000555542 SPTY2D1Q68D10 685 aaPredicted RBP30.16■■■□□ 2.42
PRKCH-216ENST00000555542 OPTNQ96CV9 577 aa30.16■■■□□ 2.42
PRKCH-216ENST00000555542 MAP3K9P80192 1104 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms