RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TMED8Q6PL24 325 aaPredicted RBP17.34■□□□□ 0.37
CHD8-208ENST00000555301 SLF2Q8IX21 1173 aa17.34■□□□□ 0.37
CHD8-208ENST00000555301 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
CHD8-208ENST00000555301 SERPINA10Q9UK55 444 aa17.34■□□□□ 0.37
CHD8-208ENST00000555301 CHD4Q14839 1912 aa17.33■□□□□ 0.37
CHD8-208ENST00000555301 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
CHD8-208ENST00000555301 EPS15P42566 896 aa17.33■□□□□ 0.36
CHD8-208ENST00000555301 GSTO1P78417 241 aa17.33■□□□□ 0.36
CHD8-208ENST00000555301 GPBP1L1Q9HC44 474 aaPredicted RBP17.33■□□□□ 0.36
CHD8-208ENST00000555301 MYOZ2Q9NPC6 264 aa17.33■□□□□ 0.36
CHD8-208ENST00000555301 ADARB2Q9NS39 739 aaKnown RBP17.33■□□□□ 0.36
CHD8-208ENST00000555301 POTECB2RU33 542 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 EPHX2P34913 555 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 MECOMQ03112 1051 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 LRRFIP1Q32MZ4 808 aaKnown RBP17.32■□□□□ 0.36
CHD8-208ENST00000555301 HHIPL2Q6UWX4 724 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 KBTBD3Q8NAB2 608 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 TEKT1Q969V4 418 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 NSUN4Q96CB9 384 aaKnown RBP17.32■□□□□ 0.36
CHD8-208ENST00000555301 EVI5LQ96CN4 794 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 EDC3Q96F86 508 aaKnown RBP17.32■□□□□ 0.36
CHD8-208ENST00000555301 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
CHD8-208ENST00000555301 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
CHD8-208ENST00000555301 PSME4Q14997 1843 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 WDR90Q96KV7 1748 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 MAP4K4O95819 1239 aaPredicted RBP17.31■□□□□ 0.36
CHD8-208ENST00000555301 LDHCP07864 332 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 CRKP46108 304 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 DLGAP5Q15398 846 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 ZSCAN25Q6NSZ9 544 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 USP50Q70EL3 339 aaPredicted RBP17.31■□□□□ 0.36
CHD8-208ENST00000555301 PNMA8AQ86V59 439 aaPredicted RBP17.31■□□□□ 0.36
CHD8-208ENST00000555301 CNTROBQ8N137 903 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 MTMR14Q8NCE2 650 aa17.31■□□□□ 0.36
CHD8-208ENST00000555301 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
CHD8-208ENST00000555301 SHTN1A0MZ66 631 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 RGS3P49796 1198 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 RBM5P52756 815 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHD8-208ENST00000555301 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 CFAP100Q494V2 611 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 TTC22Q5TAA0 569 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 NAA16Q6N069 864 aaPredicted RBP17.3■□□□□ 0.36
CHD8-208ENST00000555301 SAMD7Q7Z3H4 446 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 FAM163AQ96GL9 167 aaPredicted RBP17.3■□□□□ 0.36
CHD8-208ENST00000555301 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
CHD8-208ENST00000555301 DIXDC1Q155Q3 683 aa17.29■□□□□ 0.36
CHD8-208ENST00000555301 TBC1D10BQ4KMP7 808 aaPredicted RBP17.29■□□□□ 0.36
CHD8-208ENST00000555301 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
CHD8-208ENST00000555301 SLC9C2Q5TAH2 1124 aa17.29■□□□□ 0.36
CHD8-208ENST00000555301 ZDHHC15Q96MV8 337 aa17.29■□□□□ 0.36
CHD8-208ENST00000555301 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
CHD8-208ENST00000555301 ZNF646O15015 1829 aaPredicted RBP17.28■□□□□ 0.36
CHD8-208ENST00000555301 MROH7-TTC4A0A0A0MT08 1334 aa17.28■□□□□ 0.36
CHD8-208ENST00000555301 GAKO14976 1311 aa17.28■□□□□ 0.36
CHD8-208ENST00000555301 ZFYP08048 801 aaPredicted RBP17.28■□□□□ 0.36
CHD8-208ENST00000555301 PDE6AP16499 860 aa17.28■□□□□ 0.36
CHD8-208ENST00000555301 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
CHD8-208ENST00000555301 MAGEB6Q8N7X4 407 aa17.28■□□□□ 0.36
CHD8-208ENST00000555301 ZNF384Q8TF68 577 aa17.28■□□□□ 0.36
CHD8-208ENST00000555301 RILPL2Q969X0 211 aa17.28■□□□□ 0.36
CHD8-208ENST00000555301 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 WNT10BO00744 389 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 MYO1BO43795 1136 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 EGFRP00533 1210 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 GSPT1P15170 499 aaKnown RBP17.27■□□□□ 0.36
CHD8-208ENST00000555301 CYP7A1P22680 504 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 ADD2P35612 726 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 UBE3CQ15386 1083 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 ZNF784Q8NCA9 323 aaPredicted RBP17.27■□□□□ 0.36
CHD8-208ENST00000555301 TRPM4Q8TD43 1214 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 ZBED3Q96IU2 234 aaPredicted RBP17.27■□□□□ 0.36
CHD8-208ENST00000555301 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
CHD8-208ENST00000555301 DAGLAQ9Y4D2 1042 aa17.27■□□□□ 0.36
CHD8-208ENST00000555301 MYH13Q9UKX3 1938 aa17.26■□□□□ 0.35
CHD8-208ENST00000555301 GPR75-ASB3A0A0A6YYF3 556 aa17.26■□□□□ 0.35
CHD8-208ENST00000555301 BAG3O95817 575 aa17.26■□□□□ 0.35
CHD8-208ENST00000555301 EAPPQ56P03 285 aaPredicted RBP17.26■□□□□ 0.35
CHD8-208ENST00000555301 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
CHD8-208ENST00000555301 ZC3H15Q8WU90 426 aaKnown RBP17.26■□□□□ 0.35
CHD8-208ENST00000555301 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
CHD8-208ENST00000555301 RFX7Q2KHR2 1363 aa17.26■□□□□ 0.35
CHD8-208ENST00000555301 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
CHD8-208ENST00000555301 RNF113AO15541 343 aaKnown RBP17.25■□□□□ 0.35
CHD8-208ENST00000555301 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
CHD8-208ENST00000555301 NBPF9Q3BBW0 867 aa17.25■□□□□ 0.35
CHD8-208ENST00000555301 BMP2KLQ5H9B9 411 aa17.25■□□□□ 0.35
CHD8-208ENST00000555301 APOBEC3HQ6NTF7 200 aaKnown RBP17.25■□□□□ 0.35
CHD8-208ENST00000555301 SCN4AP35499 1836 aa17.24■□□□□ 0.35
CHD8-208ENST00000555301 TCRBV5S4A2TA0A5A2 114 aa17.24■□□□□ 0.35
CHD8-208ENST00000555301 SDSP20132 328 aa17.24■□□□□ 0.35
CHD8-208ENST00000555301 BTDP43251 543 aa17.24■□□□□ 0.35
CHD8-208ENST00000555301 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
CHD8-208ENST00000555301 HIP1O00291 1037 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 PLCG2P16885 1265 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 PPP4CP60510 307 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms