RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 GNL3LQ9NVN8 582 aaKnown RBP26.72■■□□□ 1.87
SYNE2-218ENST00000555241 MAST3O60307 1309 aa26.71■■□□□ 1.87
SYNE2-218ENST00000555241 SPDYE2Q495Y8 402 aa26.71■■□□□ 1.87
SYNE2-218ENST00000555241 PNMA6EA0A0J9YXQ4 647 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 UBE2Q2LH0YL09 131 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 ZBTB22O15209 634 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 RLBP1P12271 317 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 TNFAIP1Q13829 316 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 ARMC9Q7Z3E5 817 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 RASAL3Q86YV0 1011 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 ITPRIPQ8IWB1 547 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 TNS4Q8IZW8 715 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 MRIQ9BWK5 157 aa26.7■■□□□ 1.86
SYNE2-218ENST00000555241 SEMA3EO15041 775 aa26.69■■□□□ 1.86
SYNE2-218ENST00000555241 TEKT1Q969V4 418 aa26.69■■□□□ 1.86
SYNE2-218ENST00000555241 TDRD3Q9H7E2 651 aaKnown RBP26.69■■□□□ 1.86
SYNE2-218ENST00000555241 ZNF70Q9UC06 446 aaPredicted RBP26.69■■□□□ 1.86
SYNE2-218ENST00000555241 AKAP2Q9Y2D5 859 aa26.69■■□□□ 1.86
SYNE2-218ENST00000555241 SSC5DA1L4H1 1573 aa26.68■■□□□ 1.86
SYNE2-218ENST00000555241 KIF23Q02241 960 aaPredicted RBP26.68■■□□□ 1.86
SYNE2-218ENST00000555241 PHKA1P46020 1223 aa26.67■■□□□ 1.86
SYNE2-218ENST00000555241 TFCP2Q12800 502 aa26.67■■□□□ 1.86
SYNE2-218ENST00000555241 RASA3Q14644 834 aa26.67■■□□□ 1.86
SYNE2-218ENST00000555241 SUPT20HL1Q3ZLR7 823 aa26.67■■□□□ 1.86
SYNE2-218ENST00000555241 DENND2AQ9ULE3 1009 aa26.67■■□□□ 1.86
SYNE2-218ENST00000555241 MYH2Q9UKX2 1941 aa26.67■■□□□ 1.86
SYNE2-218ENST00000555241 CASP8AP2Q9UKL3 1982 aa26.66■■□□□ 1.86
SYNE2-218ENST00000555241 A0A1B0GUL7 405 aa26.66■■□□□ 1.86
SYNE2-218ENST00000555241 ZBTB7BO15156 539 aaPredicted RBP26.66■■□□□ 1.86
SYNE2-218ENST00000555241 ADORA1P30542 326 aa26.66■■□□□ 1.86
SYNE2-218ENST00000555241 TIMM10P62072 90 aa26.66■■□□□ 1.86
SYNE2-218ENST00000555241 CCDC102BQ68D86 513 aa26.66■■□□□ 1.86
SYNE2-218ENST00000555241 REM2Q8IYK8 340 aaPredicted RBP26.66■■□□□ 1.86
SYNE2-218ENST00000555241 ZDHHC15Q96MV8 337 aa26.66■■□□□ 1.86
SYNE2-218ENST00000555241 G3BP1Q13283 466 aaKnown RBP eCLIP26.65■■□□□ 1.86
SYNE2-218ENST00000555241 PRKG1Q13976 671 aa26.65■■□□□ 1.86
SYNE2-218ENST00000555241 POLA2Q14181 598 aa26.65■■□□□ 1.86
SYNE2-218ENST00000555241 MAP3K11Q16584 847 aa26.65■■□□□ 1.86
SYNE2-218ENST00000555241 HHIPL2Q6UWX4 724 aa26.65■■□□□ 1.86
SYNE2-218ENST00000555241 ANGEL1Q9UNK9 670 aaKnown RBP26.65■■□□□ 1.86
SYNE2-218ENST00000555241 LAMB1P07942 1786 aa26.65■■□□□ 1.86
SYNE2-218ENST00000555241 SALL1Q9NSC2 1324 aa26.65■■□□□ 1.86
SYNE2-218ENST00000555241 OTOFQ9HC10 1997 aa26.64■■□□□ 1.86
SYNE2-218ENST00000555241 PPP1R12BO60237 982 aaPredicted RBP26.64■■□□□ 1.86
SYNE2-218ENST00000555241 MS4A1P11836 297 aa26.64■■□□□ 1.86
SYNE2-218ENST00000555241 ATP8B2P98198 1209 aa26.64■■□□□ 1.86
SYNE2-218ENST00000555241 LDLRAD1Q5T700 205 aa26.64■■□□□ 1.86
SYNE2-218ENST00000555241 SSH3Q8TE77 659 aa26.64■■□□□ 1.86
SYNE2-218ENST00000555241 TNNI2P48788 182 aa26.63■■□□□ 1.85
SYNE2-218ENST00000555241 MVPQ14764 893 aaKnown RBP26.63■■□□□ 1.85
SYNE2-218ENST00000555241 NBPF12Q5TAG4 269 aaPredicted RBP26.63■■□□□ 1.85
SYNE2-218ENST00000555241 XAGE2Q96GT9 111 aa26.63■■□□□ 1.85
SYNE2-218ENST00000555241 C1orf115Q9H7X2 142 aa26.63■■□□□ 1.85
SYNE2-218ENST00000555241 TSKSQ9UJT2 592 aa26.63■■□□□ 1.85
SYNE2-218ENST00000555241 PDS5AQ29RF7 1337 aaKnown RBP26.63■■□□□ 1.85
SYNE2-218ENST00000555241 CSRNP1Q96S65 589 aa26.62■■□□□ 1.85
SYNE2-218ENST00000555241 SAGE1Q9NXZ1 904 aa26.62■■□□□ 1.85
SYNE2-218ENST00000555241 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.62■■□□□ 1.85
SYNE2-218ENST00000555241 TCP10L2B9ZVM9 353 aa26.61■■□□□ 1.85
SYNE2-218ENST00000555241 PRDX5P30044 214 aa26.61■■□□□ 1.85
SYNE2-218ENST00000555241 APOBEC3HQ6NTF7 200 aaKnown RBP26.61■■□□□ 1.85
SYNE2-218ENST00000555241 ZGPATQ8N5A5 531 aaKnown RBP26.61■■□□□ 1.85
SYNE2-218ENST00000555241 PANK1Q8TE04 598 aa26.61■■□□□ 1.85
SYNE2-218ENST00000555241 TMOD2Q9NZR1 351 aa26.61■■□□□ 1.85
SYNE2-218ENST00000555241 FZD1Q9UP38 647 aa26.61■■□□□ 1.85
SYNE2-218ENST00000555241 AK9Q5TCS8 1911 aa26.61■■□□□ 1.85
SYNE2-218ENST00000555241 UNCXA6NJT0 531 aa26.6■■□□□ 1.85
SYNE2-218ENST00000555241 LDHBP07195 334 aaKnown RBP26.6■■□□□ 1.85
SYNE2-218ENST00000555241 RASGRF1Q13972 1273 aa26.6■■□□□ 1.85
SYNE2-218ENST00000555241 TEPSINQ96N21 525 aa26.6■■□□□ 1.85
SYNE2-218ENST00000555241 NEUROD6Q96NK8 337 aa26.6■■□□□ 1.85
SYNE2-218ENST00000555241 FKBP1CQ5VVH2 108 aa26.59■■□□□ 1.85
SYNE2-218ENST00000555241 IREB2P48200 963 aaKnown RBP26.58■■□□□ 1.85
SYNE2-218ENST00000555241 TMEM39BQ9GZU3 492 aa26.58■■□□□ 1.85
SYNE2-218ENST00000555241 RCAN3Q9UKA8 241 aa26.58■■□□□ 1.85
SYNE2-218ENST00000555241 FAM83AQ86UY5 434 aa26.57■■□□□ 1.84
SYNE2-218ENST00000555241 GPR108Q9NPR9 543 aa26.57■■□□□ 1.84
SYNE2-218ENST00000555241 RNF186Q9NXI6 227 aa26.57■■□□□ 1.84
SYNE2-218ENST00000555241 DAGLAQ9Y4D2 1042 aa26.57■■□□□ 1.84
SYNE2-218ENST00000555241 USP2O75604 605 aaPredicted RBP26.56■■□□□ 1.84
SYNE2-218ENST00000555241 SURF6O75683 361 aaKnown RBP26.56■■□□□ 1.84
SYNE2-218ENST00000555241 CACNB3P54284 484 aa26.56■■□□□ 1.84
SYNE2-218ENST00000555241 OS9Q13438 667 aaPredicted RBP26.56■■□□□ 1.84
SYNE2-218ENST00000555241 DIXDC1Q155Q3 683 aa26.56■■□□□ 1.84
SYNE2-218ENST00000555241 GORABQ5T7V8 394 aa26.56■■□□□ 1.84
SYNE2-218ENST00000555241 NOP58Q9Y2X3 529 aaKnown RBP26.56■■□□□ 1.84
SYNE2-218ENST00000555241 CEP85Q6P2H3 762 aa26.55■■□□□ 1.84
SYNE2-218ENST00000555241 CDAN1Q8IWY9 1227 aa26.55■■□□□ 1.84
SYNE2-218ENST00000555241 SLC10A4Q96EP9 437 aa26.55■■□□□ 1.84
SYNE2-218ENST00000555241 RPAP1Q9BWH6 1393 aaPredicted RBP26.55■■□□□ 1.84
SYNE2-218ENST00000555241 TRPA1O75762 1119 aa26.54■■□□□ 1.84
SYNE2-218ENST00000555241 SPRYD7Q5W111 196 aa26.54■■□□□ 1.84
SYNE2-218ENST00000555241 ANKRD13AQ8IZ07 590 aa26.54■■□□□ 1.84
SYNE2-218ENST00000555241 ARID4AP29374 1257 aaPredicted RBP26.53■■□□□ 1.84
SYNE2-218ENST00000555241 TM4SF4P48230 202 aa26.53■■□□□ 1.84
SYNE2-218ENST00000555241 SREBF2Q12772 1141 aa26.53■■□□□ 1.84
SYNE2-218ENST00000555241 MKRN3Q13064 507 aaKnown RBP26.53■■□□□ 1.84
SYNE2-218ENST00000555241 TNNI3KQ59H18 835 aa26.53■■□□□ 1.84
SYNE2-218ENST00000555241 SPTY2D1Q68D10 685 aaPredicted RBP26.53■■□□□ 1.84
SYNE2-218ENST00000555241 CLMNQ96JQ2 1002 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms