RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 ZSCAN12O43309 604 aa18.49■□□□□ 0.55
MARK3-209ENST00000555235 URI1O94763 535 aaPredicted RBP18.49■□□□□ 0.55
MARK3-209ENST00000555235 PDIA3P30101 505 aaKnown RBP18.49■□□□□ 0.55
MARK3-209ENST00000555235 DCAF5Q96JK2 942 aa18.49■□□□□ 0.55
MARK3-209ENST00000555235 NCOA5Q9HCD5 579 aaKnown RBP18.49■□□□□ 0.55
MARK3-209ENST00000555235 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
MARK3-209ENST00000555235 HSPD1P10809 573 aaKnown RBP18.49■□□□□ 0.55
MARK3-209ENST00000555235 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
MARK3-209ENST00000555235 TMX1Q9H3N1 280 aa18.49■□□□□ 0.55
MARK3-209ENST00000555235 GUCY1B3Q02153 619 aa18.48■□□□□ 0.55
MARK3-209ENST00000555235 RAD51AP2Q09MP3 1159 aa18.48■□□□□ 0.55
MARK3-209ENST00000555235 MPHOSPH8Q99549 860 aa18.48■□□□□ 0.55
MARK3-209ENST00000555235 SPTLC2O15270 562 aa18.48■□□□□ 0.55
MARK3-209ENST00000555235 POLR3GO15318 223 aaPredicted RBP18.48■□□□□ 0.55
MARK3-209ENST00000555235 CYP27B1O15528 508 aa18.48■□□□□ 0.55
MARK3-209ENST00000555235 TIMM10P62072 90 aa18.48■□□□□ 0.55
MARK3-209ENST00000555235 GPR161Q8N6U8 529 aaKnown RBP18.48■□□□□ 0.55
MARK3-209ENST00000555235 PARP3Q9Y6F1 533 aa18.48■□□□□ 0.55
MARK3-209ENST00000555235 GOLGA6L9A6NEM1 432 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 MYO1BO43795 1136 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 ZNF202O95125 648 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 CARD6Q9BX69 1037 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 MAST3O60307 1309 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 VGLL3A8MV65 326 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 LMOD1P29536 600 aaPredicted RBP18.47■□□□□ 0.55
MARK3-209ENST00000555235 EVCP57679 992 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 BRAPQ7Z569 592 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 FBXL16Q8N461 479 aa18.47■□□□□ 0.55
MARK3-209ENST00000555235 IPO4Q8TEX9 1081 aaKnown RBP18.47■□□□□ 0.55
MARK3-209ENST00000555235 NAP1L2Q9ULW6 460 aaPredicted RBP18.47■□□□□ 0.55
MARK3-209ENST00000555235 BIN1O00499 593 aa18.46■□□□□ 0.55
MARK3-209ENST00000555235 RNF113AO15541 343 aaKnown RBP18.46■□□□□ 0.55
MARK3-209ENST00000555235 FDPSP14324 419 aaKnown RBP18.46■□□□□ 0.55
MARK3-209ENST00000555235 IL15P40933 162 aaPredicted RBP18.46■□□□□ 0.55
MARK3-209ENST00000555235 UBASH3AP57075 661 aa18.46■□□□□ 0.55
MARK3-209ENST00000555235 REXO1L1PQ8IX06 675 aa18.46■□□□□ 0.55
MARK3-209ENST00000555235 GLI3P10071 1580 aa18.46■□□□□ 0.55
MARK3-209ENST00000555235 ZNF335Q9H4Z2 1342 aaPredicted RBP18.46■□□□□ 0.55
MARK3-209ENST00000555235 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
MARK3-209ENST00000555235 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.55
MARK3-209ENST00000555235 TBC1D8O95759 1140 aa18.46■□□□□ 0.54
MARK3-209ENST00000555235 CC2D1AQ6P1N0 951 aaPredicted RBP18.46■□□□□ 0.54
MARK3-209ENST00000555235 NEK11Q8NG66 645 aa18.46■□□□□ 0.54
MARK3-209ENST00000555235 CLIC4Q9Y696 253 aa18.46■□□□□ 0.54
MARK3-209ENST00000555235 ALS2Q96Q42 1657 aa18.45■□□□□ 0.54
MARK3-209ENST00000555235 KIF1AQ12756 1690 aa18.45■□□□□ 0.54
MARK3-209ENST00000555235 ARHGAP6O43182 974 aa18.45■□□□□ 0.54
MARK3-209ENST00000555235 OAS2P29728 719 aaKnown RBP18.45■□□□□ 0.54
MARK3-209ENST00000555235 UTP14AQ9BVJ6 771 aaKnown RBP18.45■□□□□ 0.54
MARK3-209ENST00000555235 FEZ2Q9UHY8 353 aaPredicted RBP18.45■□□□□ 0.54
MARK3-209ENST00000555235 SEC31AO94979 1220 aaKnown RBP18.44■□□□□ 0.54
MARK3-209ENST00000555235 SERPINC1P01008 464 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 CMA1P23946 247 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 SMC1AQ14683 1233 aaKnown RBP18.44■□□□□ 0.54
MARK3-209ENST00000555235 CHST3Q7LGC8 479 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 C8orf76Q96K31 380 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 M0R2C6 588 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 PPFIA3O75145 1194 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 IFIT1P09914 478 aaKnown RBP18.44■□□□□ 0.54
MARK3-209ENST00000555235 MYL5Q02045 173 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 MYSM1Q5VVJ2 828 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
MARK3-209ENST00000555235 VSTM4Q8IW00 320 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 ARFGAP3Q9NP61 516 aa18.44■□□□□ 0.54
MARK3-209ENST00000555235 EYA2O00167 538 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 TOP1P11387 765 aaKnown RBP18.43■□□□□ 0.54
MARK3-209ENST00000555235 CABP4P57796 275 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 CFAP100Q494V2 611 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 TTLL5Q6EMB2 1281 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 SYNE3Q6ZMZ3 975 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 SMARCE1Q969G3 411 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 AK7Q96M32 723 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 HSD3B7Q9H2F3 369 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 CWC25Q9NXE8 425 aaPredicted RBP18.43■□□□□ 0.54
MARK3-209ENST00000555235 CWC15Q9P013 229 aaKnown RBP18.43■□□□□ 0.54
MARK3-209ENST00000555235 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 COL18A1P39060 1754 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 FANCGO15287 622 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
MARK3-209ENST00000555235 SASH3O75995 380 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 ATP1A3P13637 1013 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 PFKFB1P16118 471 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 CASQ1P31415 396 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 MAP3K9P80192 1104 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 LRRC24Q50LG9 513 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 JAKMIP3Q5VZ66 844 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 KRBA2Q6ZNG9 492 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.43■□□□□ 0.54
MARK3-209ENST00000555235 TUBE1Q9UJT0 475 aa18.43■□□□□ 0.54
MARK3-209ENST00000555235 SPEF2Q9C093 1822 aa18.42■□□□□ 0.54
MARK3-209ENST00000555235 VWA3AA6NCI4 1184 aa18.42■□□□□ 0.54
MARK3-209ENST00000555235 FBXO18Q8NFZ0 1043 aa18.42■□□□□ 0.54
MARK3-209ENST00000555235 PPP2R2CQ9Y2T4 447 aa18.42■□□□□ 0.54
MARK3-209ENST00000555235 A0A1B0GUL7 405 aa18.42■□□□□ 0.54
MARK3-209ENST00000555235 CIAO1O76071 339 aa18.42■□□□□ 0.54
MARK3-209ENST00000555235 POLR3DP05423 398 aaPredicted RBP18.42■□□□□ 0.54
MARK3-209ENST00000555235 RABGGTAQ92696 567 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms