RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 HIBADHP31937 336 aaKnown RBP12.21□□□□□ -0.45
TMEM253-204ENST00000554844 GTF2A2P52657 109 aa12.21□□□□□ -0.45
TMEM253-204ENST00000554844 FOXO4P98177 505 aa12.21□□□□□ -0.45
TMEM253-204ENST00000554844 UBE4AQ14139 1066 aa12.21□□□□□ -0.45
TMEM253-204ENST00000554844 KIF22Q14807 665 aa12.21□□□□□ -0.45
TMEM253-204ENST00000554844 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
TMEM253-204ENST00000554844 TMOD2Q9NZR1 351 aa12.21□□□□□ -0.45
TMEM253-204ENST00000554844 ZNF70Q9UC06 446 aaPredicted RBP12.21□□□□□ -0.45
TMEM253-204ENST00000554844 LAMB1P07942 1786 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 FAM205AQ6ZU69 1335 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 TCP10L2B9ZVM9 353 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 F6X3S4 739 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 CCL15Q16663 113 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 SLC4A8Q2Y0W8 1093 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 SLC9C1Q4G0N8 1177 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 HOOK2Q96ED9 719 aa12.2□□□□□ -0.46
TMEM253-204ENST00000554844 ZNF594Q96JF6 807 aaPredicted RBP12.2□□□□□ -0.46
TMEM253-204ENST00000554844 TDRD3Q9H7E2 651 aaKnown RBP12.2□□□□□ -0.46
TMEM253-204ENST00000554844 SALL2Q9Y467 1007 aaPredicted RBP12.2□□□□□ -0.46
TMEM253-204ENST00000554844 TESPA1A2RU30 521 aaPredicted RBP12.19□□□□□ -0.46
TMEM253-204ENST00000554844 VAMP4O75379 141 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 GJA5P36382 358 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 CRKP46108 304 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 MAP3K9P80192 1104 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 EXOSC9Q06265 439 aaKnown RBP12.19□□□□□ -0.46
TMEM253-204ENST00000554844 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 HABP4Q5JVS0 413 aaKnown RBP12.19□□□□□ -0.46
TMEM253-204ENST00000554844 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 DZIP1LQ8IYY4 767 aaKnown RBP12.19□□□□□ -0.46
TMEM253-204ENST00000554844 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
TMEM253-204ENST00000554844 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
TMEM253-204ENST00000554844 MROH5Q6ZUA9 1318 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 OTOFQ9HC10 1997 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 ARAP2Q8WZ64 1704 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 GYG1P46976 350 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 CHAF1AQ13111 956 aaPredicted RBP12.18□□□□□ -0.46
TMEM253-204ENST00000554844 TDRD7Q8NHU6 1098 aaKnown RBP12.18□□□□□ -0.46
TMEM253-204ENST00000554844 TBC1D22AQ8WUA7 517 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 OTUD5Q96G74 571 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
TMEM253-204ENST00000554844 MAST3O60307 1309 aa12.17□□□□□ -0.46
TMEM253-204ENST00000554844 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
TMEM253-204ENST00000554844 CETPP11597 493 aa12.17□□□□□ -0.46
TMEM253-204ENST00000554844 EN2P19622 333 aaPredicted RBP12.17□□□□□ -0.46
TMEM253-204ENST00000554844 VGLL4Q14135 290 aa12.17□□□□□ -0.46
TMEM253-204ENST00000554844 TEKT1Q969V4 418 aa12.17□□□□□ -0.46
TMEM253-204ENST00000554844 PTPN18Q99952 460 aa12.17□□□□□ -0.46
TMEM253-204ENST00000554844 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
TMEM253-204ENST00000554844 AOX1Q06278 1338 aa12.16□□□□□ -0.46
TMEM253-204ENST00000554844 METTL24Q5JXM2 366 aa12.16□□□□□ -0.46
TMEM253-204ENST00000554844 EPHA10Q5JZY3 1008 aa12.16□□□□□ -0.46
TMEM253-204ENST00000554844 DCAF15Q66K64 600 aa12.16□□□□□ -0.46
TMEM253-204ENST00000554844 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.16□□□□□ -0.46
TMEM253-204ENST00000554844 BRI3BPQ8WY22 251 aa12.16□□□□□ -0.46
TMEM253-204ENST00000554844 ZNF333Q96JL9 665 aa12.16□□□□□ -0.46
TMEM253-204ENST00000554844 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
TMEM253-204ENST00000554844 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
TMEM253-204ENST00000554844 HDLBPQ00341 1268 aaKnown RBP12.15□□□□□ -0.46
TMEM253-204ENST00000554844 SNAPC2Q13487 334 aa12.15□□□□□ -0.46
TMEM253-204ENST00000554844 ERO1BQ86YB8 467 aa12.15□□□□□ -0.46
TMEM253-204ENST00000554844 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM253-204ENST00000554844 WRNIP1Q96S55 665 aa12.15□□□□□ -0.46
TMEM253-204ENST00000554844 ZCCHC17Q9NP64 241 aaKnown RBP12.15□□□□□ -0.46
TMEM253-204ENST00000554844 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
TMEM253-204ENST00000554844 PTCH2Q9Y6C5 1203 aa12.15□□□□□ -0.46
TMEM253-204ENST00000554844 SPDYE5A6NIY4 337 aa12.14□□□□□ -0.47
TMEM253-204ENST00000554844 MYCP01106 439 aaPredicted RBP12.14□□□□□ -0.47
TMEM253-204ENST00000554844 GNRH1P01148 92 aa12.14□□□□□ -0.47
TMEM253-204ENST00000554844 ZEB1P37275 1124 aaPredicted RBP12.14□□□□□ -0.47
TMEM253-204ENST00000554844 PRMT2P55345 433 aa12.14□□□□□ -0.47
TMEM253-204ENST00000554844 CCDC184Q52MB2 194 aa12.14□□□□□ -0.47
TMEM253-204ENST00000554844 FAM43AQ8N2R8 423 aa12.14□□□□□ -0.47
TMEM253-204ENST00000554844 SUCLG2Q96I99 432 aa12.14□□□□□ -0.47
TMEM253-204ENST00000554844 TEPSINQ96N21 525 aa12.14□□□□□ -0.47
TMEM253-204ENST00000554844 ANP32CO43423 234 aa12.13□□□□□ -0.47
TMEM253-204ENST00000554844 TLR2O60603 784 aa12.13□□□□□ -0.47
TMEM253-204ENST00000554844 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
TMEM253-204ENST00000554844 HOXD10P28358 340 aa12.13□□□□□ -0.47
TMEM253-204ENST00000554844 VASPP50552 380 aaPredicted RBP12.13□□□□□ -0.47
TMEM253-204ENST00000554844 PPIL2Q13356 520 aa12.13□□□□□ -0.47
TMEM253-204ENST00000554844 FAM83AQ86UY5 434 aa12.13□□□□□ -0.47
TMEM253-204ENST00000554844 ZNF341Q9BYN7 854 aa12.13□□□□□ -0.47
TMEM253-204ENST00000554844 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
TMEM253-204ENST00000554844 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
TMEM253-204ENST00000554844 CACNB3P54284 484 aa12.12□□□□□ -0.47
TMEM253-204ENST00000554844 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
TMEM253-204ENST00000554844 FBXO33Q7Z6M2 555 aa12.12□□□□□ -0.47
TMEM253-204ENST00000554844 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
TMEM253-204ENST00000554844 ZDHHC15Q96MV8 337 aa12.12□□□□□ -0.47
TMEM253-204ENST00000554844 BICC1Q9H694 974 aaKnown RBP12.12□□□□□ -0.47
TMEM253-204ENST00000554844 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
TMEM253-204ENST00000554844 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
TMEM253-204ENST00000554844 SNCAIPQ9Y6H5 919 aa12.12□□□□□ -0.47
TMEM253-204ENST00000554844 HTTP42858 3142 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms