RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PSMD2Q13200 908 aa7.01□□□□□ -1.29
SCFD1-214ENST00000554819 HP1BP3Q5SSJ5 553 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-214ENST00000554819 TMEM39AQ9NV64 488 aa7.01□□□□□ -1.29
SCFD1-214ENST00000554819 GPN3Q9UHW5 284 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-214ENST00000554819 PROCP04070 461 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 USP17L7P0C7H9 530 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 NOS3P29474 1203 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 AP3B2Q13367 1082 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 POU4F3Q15319 338 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 TMC4Q7Z404 712 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 C3orf58Q8NDZ4 430 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 CORO1BQ9BR76 489 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 USP26Q9BXU7 913 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 CEP41Q9BYV8 373 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 CEP44Q9C0F1 390 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 RNF208Q9H0X6 261 aa7□□□□□ -1.29
SCFD1-214ENST00000554819 MEGF11A6BM72 1044 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 ALX3O95076 343 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 WISP1O95388 367 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 FAAP100Q0VG06 881 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 EXOSC6Q5RKV6 272 aaKnown RBP6.99□□□□□ -1.29
SCFD1-214ENST00000554819 KIAA1211Q6ZU35 1233 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 ANKRD24Q8TF21 1146 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 UBASH3BQ8TF42 649 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 RUSC1Q9BVN2 902 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 MRS2Q9HD23 443 aa6.99□□□□□ -1.29
SCFD1-214ENST00000554819 LOC100289279A0A1B0GTE1 492 aa6.98□□□□□ -1.29
SCFD1-214ENST00000554819 SORBS3O60504 671 aa6.98□□□□□ -1.29
SCFD1-214ENST00000554819 MAOBP27338 520 aa6.98□□□□□ -1.29
SCFD1-214ENST00000554819 ZNF157P51786 506 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-214ENST00000554819 HNRNPUQ00839 825 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCFD1-214ENST00000554819 AGGF1Q8N302 714 aaeCLIP6.98□□□□□ -1.29
SCFD1-214ENST00000554819 CYP4F12Q9HCS2 524 aa6.98□□□□□ -1.29
SCFD1-214ENST00000554819 SAMM50Q9Y512 469 aa6.98□□□□□ -1.29
SCFD1-214ENST00000554819 GLB1P16278 677 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 TAGLNQ01995 201 aaKnown RBP6.97□□□□□ -1.29
SCFD1-214ENST00000554819 NUTM2GQ5VZR2 741 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 ANKRD34AQ69YU3 496 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 TPTE2Q6XPS3 522 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 Q6ZS46 218 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
SCFD1-214ENST00000554819 GIPC2Q8TF65 315 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 NECAB3Q96P71 396 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-214ENST00000554819 TRIM56Q9BRZ2 755 aaKnown RBP6.97□□□□□ -1.29
SCFD1-214ENST00000554819 EMILIN2Q9BXX0 1053 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 NRSN2Q9GZP1 204 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 RNF19AQ9NV58 838 aa6.97□□□□□ -1.29
SCFD1-214ENST00000554819 DOC2BQ14184 412 aa6.96□□□□□ -1.3
SCFD1-214ENST00000554819 FDX2Q6P4F2 183 aa6.96□□□□□ -1.3
SCFD1-214ENST00000554819 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.3
SCFD1-214ENST00000554819 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.3
SCFD1-214ENST00000554819 CCDC9Q9Y3X0 531 aaKnown RBP6.96□□□□□ -1.3
SCFD1-214ENST00000554819 SART1O43290 800 aaKnown RBP6.95□□□□□ -1.3
SCFD1-214ENST00000554819 NME2P22392 152 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 UVSSAQ2YD98 709 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 SV2BQ7L1I2 683 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 SMG8Q8ND04 991 aaKnown RBP6.95□□□□□ -1.3
SCFD1-214ENST00000554819 TP53INP1Q96A56 240 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 FAM161BQ96MY7 647 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-214ENST00000554819 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 TPSG1Q9NRR2 321 aa6.95□□□□□ -1.3
SCFD1-214ENST00000554819 GSTP1P09211 210 aaKnown RBP6.94□□□□□ -1.3
SCFD1-214ENST00000554819 ARNTP27540 789 aa6.94□□□□□ -1.3
SCFD1-214ENST00000554819 PDE3AQ14432 1141 aa6.94□□□□□ -1.3
SCFD1-214ENST00000554819 SULF2Q8IWU5 870 aa6.94□□□□□ -1.3
SCFD1-214ENST00000554819 C12orf50Q8NA57 414 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-214ENST00000554819 RAD18Q9NS91 495 aa6.94□□□□□ -1.3
SCFD1-214ENST00000554819 VTI1BQ9UEU0 232 aa6.94□□□□□ -1.3
SCFD1-214ENST00000554819 ENC1O14682 589 aa6.93□□□□□ -1.3
SCFD1-214ENST00000554819 DLGAP3O95886 979 aa6.93□□□□□ -1.3
SCFD1-214ENST00000554819 ZNF16P17020 682 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-214ENST00000554819 TAF1CQ15572 869 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-214ENST00000554819 CRELD1Q96HD1 420 aa6.93□□□□□ -1.3
SCFD1-214ENST00000554819 UBL7Q96S82 380 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-214ENST00000554819 KRT82Q9NSB4 513 aa6.93□□□□□ -1.3
SCFD1-214ENST00000554819 RBM47A0AV96 593 aaKnown RBP6.92□□□□□ -1.3
SCFD1-214ENST00000554819 FBXO24O75426 580 aa6.92□□□□□ -1.3
SCFD1-214ENST00000554819 SLFN14P0C7P3 912 aa6.92□□□□□ -1.3
SCFD1-214ENST00000554819 ST13P50502 369 aaKnown RBP6.92□□□□□ -1.3
SCFD1-214ENST00000554819 LRRC14Q15048 493 aa6.92□□□□□ -1.3
SCFD1-214ENST00000554819 FAM46AQ96IP4 442 aaKnown RBP6.92□□□□□ -1.3
SCFD1-214ENST00000554819 CBX8Q9HC52 389 aa6.92□□□□□ -1.3
SCFD1-214ENST00000554819 SYNGAP1Q96PV0 1343 aa6.92□□□□□ -1.3
SCFD1-214ENST00000554819 USP31Q70CQ4 1352 aa6.92□□□□□ -1.3
SCFD1-214ENST00000554819 DHX15O43143 795 aaKnown RBP6.91□□□□□ -1.3
SCFD1-214ENST00000554819 ECEL1O95672 775 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 CTSBP07858 339 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 H2AFB2P0C5Z0 115 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 RLBP1P12271 317 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 BMP6P22004 513 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 SOX4Q06945 474 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-214ENST00000554819 CCDC85BQ15834 202 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-214ENST00000554819 SCARA3Q6AZY7 606 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 KCNB2Q92953 911 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 UTP4Q969X6 686 aaKnown RBP6.91□□□□□ -1.3
SCFD1-214ENST00000554819 ZC3H12CQ9C0D7 883 aaKnown RBP6.91□□□□□ -1.3
SCFD1-214ENST00000554819 CYP8B1Q9UNU6 501 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms