RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 WNT10BO00744 389 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 UFL1O94874 794 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 REC8O95072 547 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 CLCN1P35523 988 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 RPS8P62241 208 aaKnown RBP13.46□□□□□ -0.25
SRP54-205ENST00000554803 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
SRP54-205ENST00000554803 CRHR2Q13324 411 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 FKBP5Q13451 457 aaPredicted RBP13.46□□□□□ -0.25
SRP54-205ENST00000554803 SLC4A8Q2Y0W8 1093 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 TBC1D9Q6ZT07 1266 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 HYPKQ9NX55 129 aa13.46□□□□□ -0.25
SRP54-205ENST00000554803 ANGEL1Q9UNK9 670 aaKnown RBP13.46□□□□□ -0.25
SRP54-205ENST00000554803 COL1A1P02452 1464 aaPredicted RBP13.45□□□□□ -0.26
SRP54-205ENST00000554803 USP17L3A6NCW0 530 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 USP17L4A6NCW7 530 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 XRCC6P12956 609 aaKnown RBP eCLIP13.45□□□□□ -0.26
SRP54-205ENST00000554803 MCM2P49736 904 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 COPS6Q7L5N1 327 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 USP17L1Q7RTZ2 530 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 SLC10A4Q96EP9 437 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 WNK4Q96J92 1243 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 GRPEL1Q9HAV7 217 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 GGA1Q9UJY5 639 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 PTCH2Q9Y6C5 1203 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 SPEF2Q9C093 1822 aa13.45□□□□□ -0.26
SRP54-205ENST00000554803 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
SRP54-205ENST00000554803 OTUD7BQ6GQQ9 843 aa13.44□□□□□ -0.26
SRP54-205ENST00000554803 PODNQ7Z5L7 613 aa13.44□□□□□ -0.26
SRP54-205ENST00000554803 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
SRP54-205ENST00000554803 TNPO1Q92973 898 aaKnown RBP13.44□□□□□ -0.26
SRP54-205ENST00000554803 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
SRP54-205ENST00000554803 ANKIB1Q9P2G1 1089 aa13.44□□□□□ -0.26
SRP54-205ENST00000554803 PI4KAP2A4QPH2 592 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 ST18O60284 1047 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
SRP54-205ENST00000554803 KLHL40Q2TBA0 621 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
SRP54-205ENST00000554803 OGFOD1Q8N543 542 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 PI4KAP1Q8N8J0 262 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 KIF2CQ99661 725 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 FZD1Q9UP38 647 aa13.43□□□□□ -0.26
SRP54-205ENST00000554803 SSC5DA1L4H1 1573 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 A0A1W2PPC1 479 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 ARHGEF6Q15052 776 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 SLC4A10Q6U841 1118 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 DPF3Q92784 378 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 CLMNQ96JQ2 1002 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 RTN4Q9NQC3 1192 aaKnown RBP13.42□□□□□ -0.26
SRP54-205ENST00000554803 MAP3K2Q9Y2U5 619 aa13.42□□□□□ -0.26
SRP54-205ENST00000554803 MYO3BQ8WXR4 1341 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 MYH3P11055 1940 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 TESPA1A2RU30 521 aaPredicted RBP13.41□□□□□ -0.26
SRP54-205ENST00000554803 SASH1O94885 1247 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 MMP14P50281 582 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 HS1BP3Q53T59 392 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 DACT2Q5SW24 774 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 KSR2Q6VAB6 950 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 SIRT2Q8IXJ6 389 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 DNAAF4Q8WXU2 420 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 ISCA1Q9BUE6 129 aa13.41□□□□□ -0.26
SRP54-205ENST00000554803 XDHP47989 1333 aa13.4□□□□□ -0.26
SRP54-205ENST00000554803 WTIPA6NIX2 430 aaPredicted RBP13.4□□□□□ -0.26
SRP54-205ENST00000554803 CCDC173Q0VFZ6 552 aa13.4□□□□□ -0.26
SRP54-205ENST00000554803 SHISA4Q96DD7 197 aa13.4□□□□□ -0.26
SRP54-205ENST00000554803 PTPN18Q99952 460 aa13.4□□□□□ -0.26
SRP54-205ENST00000554803 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
SRP54-205ENST00000554803 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
SRP54-205ENST00000554803 ALPK3Q96L96 1907 aa13.4□□□□□ -0.26
SRP54-205ENST00000554803 AOX1Q06278 1338 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 SOX1O00570 391 aaPredicted RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 PPP1R12BO60237 982 aaPredicted RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 DDX58O95786 925 aaKnown RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 MYCP01106 439 aaPredicted RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 GJA5P36382 358 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 ANAPC15P60006 121 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 ANKRD13DQ6ZTN6 518 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 TRIM44Q96DX7 344 aaPredicted RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 IL17RAQ96F46 866 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
SRP54-205ENST00000554803 MXD3Q9BW11 206 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
SRP54-205ENST00000554803 MED23Q9ULK4 1368 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 ATP2B4P23634 1241 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 BEND3Q5T5X7 828 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 STRIP1Q5VSL9 837 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 CEP85Q6P2H3 762 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 LRCH3Q96II8 777 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 MYD88Q99836 296 aa13.38□□□□□ -0.27
SRP54-205ENST00000554803 HTATIP2Q9BUP3 242 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms