RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 EIF5BO60841 1220 aaKnown RBP14.77□□□□□ -0.05
RIPK3-204ENST00000554756 RBM5P52756 815 aaKnown RBP eCLIP14.77□□□□□ -0.05
RIPK3-204ENST00000554756 ANKRD45Q5TZF3 282 aa14.77□□□□□ -0.05
RIPK3-204ENST00000554756 SMC1BQ8NDV3 1235 aa14.77□□□□□ -0.05
RIPK3-204ENST00000554756 ABCF2Q9UG63 623 aa14.77□□□□□ -0.05
RIPK3-204ENST00000554756 PCDHAC2Q9Y5I4 1007 aa14.77□□□□□ -0.05
RIPK3-204ENST00000554756 PRDX5P30044 214 aa14.76□□□□□ -0.05
RIPK3-204ENST00000554756 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
RIPK3-204ENST00000554756 CHD1LQ86WJ1 897 aa14.76□□□□□ -0.05
RIPK3-204ENST00000554756 ZAP70P43403 619 aa14.75□□□□□ -0.05
RIPK3-204ENST00000554756 DLGAP5Q15398 846 aa14.75□□□□□ -0.05
RIPK3-204ENST00000554756 NBPF9Q3BBW0 867 aa14.75□□□□□ -0.05
RIPK3-204ENST00000554756 CFAP100Q494V2 611 aa14.75□□□□□ -0.05
RIPK3-204ENST00000554756 NDUFB9Q9Y6M9 179 aa14.75□□□□□ -0.05
RIPK3-204ENST00000554756 PDS5AQ29RF7 1337 aaKnown RBP14.75□□□□□ -0.05
RIPK3-204ENST00000554756 ZBTB22O15209 634 aa14.75□□□□□ -0.05
RIPK3-204ENST00000554756 LDHBP07195 334 aaKnown RBP14.75□□□□□ -0.05
RIPK3-204ENST00000554756 CNTROBQ8N137 903 aa14.75□□□□□ -0.05
RIPK3-204ENST00000554756 ZNF512BQ96KM6 892 aaPredicted RBP14.75□□□□□ -0.05
RIPK3-204ENST00000554756 SALL1Q9NSC2 1324 aa14.74□□□□□ -0.05
RIPK3-204ENST00000554756 CRKP46108 304 aa14.74□□□□□ -0.05
RIPK3-204ENST00000554756 BECN1Q14457 450 aa14.74□□□□□ -0.05
RIPK3-204ENST00000554756 ZGPATQ8N5A5 531 aaKnown RBP14.74□□□□□ -0.05
RIPK3-204ENST00000554756 GGA3Q9NZ52 723 aa14.74□□□□□ -0.05
RIPK3-204ENST00000554756 SUGT1Q9Y2Z0 365 aa14.74□□□□□ -0.05
RIPK3-204ENST00000554756 WNT10BO00744 389 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 MMP14P50281 582 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 FSTL1Q12841 308 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 ANGEL2Q5VTE6 544 aaKnown RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 ZC3H15Q8WU90 426 aaKnown RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 PRMT6Q96LA8 375 aaPredicted RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 TBC1D32Q96NH3 1257 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 SERPINA10Q9UK55 444 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 SCAF8Q9UPN6 1271 aaKnown RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 CYP2E1P05181 493 aaPredicted RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 DIXDC1Q155Q3 683 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 BMP2KLQ5H9B9 411 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 TSHZ3Q63HK5 1081 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 SPTY2D1Q68D10 685 aaPredicted RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 DZIP1Q86YF9 867 aaKnown RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 OTUD7AQ8TE49 926 aaPredicted RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 TEKT1Q969V4 418 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 DCPSQ96C86 337 aaKnown RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 ZBED3Q96IU2 234 aaPredicted RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 GLIS2Q9BZE0 524 aaPredicted RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 BOLA2Q9H3K6 86 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 PIH1D3Q9NQM4 214 aaKnown RBP14.73□□□□□ -0.05
RIPK3-204ENST00000554756 RAI14Q9P0K7 980 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 LRP2BPQ9P2M1 347 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 PGAP2Q9UHJ9 254 aa14.73□□□□□ -0.05
RIPK3-204ENST00000554756 MAST3O60307 1309 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 AOX1Q06278 1338 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 CLRN2A0PK11 232 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 HSPA6P17066 643 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 FMR1Q06787 632 aaKnown RBP eCLIP14.72□□□□□ -0.05
RIPK3-204ENST00000554756 DLK2Q6UY11 383 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 USP48Q86UV5 1035 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 MTMR14Q8NCE2 650 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 DNAJC2Q99543 621 aaKnown RBP14.72□□□□□ -0.05
RIPK3-204ENST00000554756 ADAMTSL1Q8N6G6 1762 aa14.72□□□□□ -0.05
RIPK3-204ENST00000554756 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 ADM5C9JUS6 153 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 TRAF5O00463 557 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 ATP5JP18859 108 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 HDLBPQ00341 1268 aaKnown RBP14.71□□□□□ -0.05
RIPK3-204ENST00000554756 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 ANTXR1Q9H6X2 564 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 TDRD3Q9H7E2 651 aaKnown RBP14.71□□□□□ -0.05
RIPK3-204ENST00000554756 ECHDC1Q9NTX5 307 aa14.71□□□□□ -0.05
RIPK3-204ENST00000554756 ITGBL1O95965 494 aaPredicted RBP14.7□□□□□ -0.06
RIPK3-204ENST00000554756 MECOMQ03112 1051 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 KRT26Q7Z3Y9 468 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 EDC3Q96F86 508 aaKnown RBP14.7□□□□□ -0.06
RIPK3-204ENST00000554756 GPATCH3Q96I76 525 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 MYO1BO43795 1136 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 HHIPL2Q6UWX4 724 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 CDC37L1Q7L3B6 337 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 SULF1Q8IWU6 871 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.7□□□□□ -0.06
RIPK3-204ENST00000554756 ZDHHC15Q96MV8 337 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 MRIQ9BWK5 157 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 VEZTQ9HBM0 779 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 DAGLAQ9Y4D2 1042 aa14.7□□□□□ -0.06
RIPK3-204ENST00000554756 GOLIM4O00461 696 aa14.69□□□□□ -0.06
RIPK3-204ENST00000554756 IDH1O75874 414 aaKnown RBP14.69□□□□□ -0.06
RIPK3-204ENST00000554756 ZNF384Q8TF68 577 aa14.69□□□□□ -0.06
RIPK3-204ENST00000554756 ZNF70Q9UC06 446 aaPredicted RBP14.69□□□□□ -0.06
RIPK3-204ENST00000554756 MYH13Q9UKX3 1938 aa14.69□□□□□ -0.06
RIPK3-204ENST00000554756 APOBEC3HQ6NTF7 200 aaKnown RBP14.68□□□□□ -0.06
RIPK3-204ENST00000554756 NSUN4Q96CB9 384 aaKnown RBP14.68□□□□□ -0.06
RIPK3-204ENST00000554756 HAUS7Q99871 368 aa14.68□□□□□ -0.06
RIPK3-204ENST00000554756 SEC24BO95487 1268 aa14.68□□□□□ -0.06
RIPK3-204ENST00000554756 MX1P20591 662 aa14.68□□□□□ -0.06
RIPK3-204ENST00000554756 CACNB3P54284 484 aa14.68□□□□□ -0.06
RIPK3-204ENST00000554756 ZNF408Q9H9D4 720 aa14.68□□□□□ -0.06
RIPK3-204ENST00000554756 PAG1Q9NWQ8 432 aa14.68□□□□□ -0.06
RIPK3-204ENST00000554756 MAP4K4O95819 1239 aaPredicted RBP14.67□□□□□ -0.06
RIPK3-204ENST00000554756 GSTO1P78417 241 aa14.67□□□□□ -0.06
RIPK3-204ENST00000554756 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms