RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 EFHC2Q5JST6 749 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 TBC1D9Q6ZT07 1266 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 AMIGO3Q86WK7 504 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 PHF24Q9UPV7 400 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 GOLGB1Q14789 3259 aaKnown RBP6.79□□□□□ -1.32
ATXN3-229ENST00000554672 ROCK2O75116 1388 aaKnown RBP6.79□□□□□ -1.32
ATXN3-229ENST00000554672 COL24A1Q17RW2 1714 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 KIAA1210Q9ULL0 1709 aa6.79□□□□□ -1.32
ATXN3-229ENST00000554672 BTAF1O14981 1849 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 EDC4Q6P2E9 1401 aaKnown RBP6.78□□□□□ -1.32
ATXN3-229ENST00000554672 NSD3Q9BZ95 1437 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 LOC102724428A0A0B4J2F2 783 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 MMP10P09238 476 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 HOXB4P17483 251 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-229ENST00000554672 FBLN1P23142 703 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 SIK1P57059 783 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 GPAT2Q6NUI2 795 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 BEND7Q8N7W2 519 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-229ENST00000554672 NFATC2IPQ8NCF5 419 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 GALNT6Q8NCL4 622 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 PIGBQ92521 554 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 AIDAQ96BJ3 306 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 DCAF5Q96JK2 942 aa6.78□□□□□ -1.32
ATXN3-229ENST00000554672 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ATXN3-229ENST00000554672 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.32
ATXN3-229ENST00000554672 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.32
ATXN3-229ENST00000554672 CYP27B1O15528 508 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 DPEP1P16444 411 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 FGFR3P22607 806 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 TMF1P82094 1093 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 NCOA4Q13772 614 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 EML3Q32P44 896 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 DEPDC4Q8N2C3 294 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 USHBP1Q8N6Y0 703 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.77□□□□□ -1.33
ATXN3-229ENST00000554672 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 RRAGCQ9HB90 399 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 CCDC87Q9NVE4 849 aa6.77□□□□□ -1.33
ATXN3-229ENST00000554672 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 WNK3Q9BYP7 1800 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 A0A1W2PNR3 127 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 PHF20L1A8MW92 1017 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 BMP4P12644 408 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 GTF2IP78347 998 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 NLRP8Q86W28 1048 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 C1orf216Q8TAB5 229 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 EDARADDQ8WWZ3 215 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 ZIC5Q96T25 663 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 CARD11Q9BXL7 1154 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 ZNF358Q9NW07 568 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 SCHIP1Q9P0W5 487 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-229ENST00000554672 PIM2Q9P1W9 311 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 NOD1Q9Y239 953 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 PCDHGC4Q9Y5F7 938 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 PARP3Q9Y6F1 533 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 CD163L1Q9NR16 1453 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 QRICH2Q9H0J4 1663 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 MEGF6O75095 1541 aa6.76□□□□□ -1.33
ATXN3-229ENST00000554672 A0A1W2PP64 1363 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 ZBTB7BO15156 539 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-229ENST00000554672 LZTS3O60299 673 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-229ENST00000554672 KCNA3P22001 575 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 EPHA4P54764 986 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 TNP2Q05952 138 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 ITPK1Q13572 414 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
ATXN3-229ENST00000554672 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
ATXN3-229ENST00000554672 ZDHHC1Q8WTX9 485 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 C7orf43Q8WVR3 580 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 TMOD3Q9NYL9 352 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 KLF15Q9UIH9 416 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 GGA1Q9UJY5 639 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 GDF2Q9UK05 429 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-229ENST00000554672 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
ATXN3-229ENST00000554672 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
ATXN3-229ENST00000554672 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 USP17L5A8MUK1 530 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 FYB1O15117 783 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 ATXN7O15265 892 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-229ENST00000554672 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-229ENST00000554672 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-229ENST00000554672 MAPTP10636 758 aaKnown RBP6.74□□□□□ -1.33
ATXN3-229ENST00000554672 RFC4P35249 363 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 TXLNAP40222 546 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 FOXK2Q01167 660 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 PLA2G4EQ3MJ16 856 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 FIGNL1Q6PIW4 674 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 PODNQ7Z5L7 613 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 GOLGA6L1Q8N7Z2 621 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 UCN2Q96RP3 112 aa6.74□□□□□ -1.33
ATXN3-229ENST00000554672 ZDHHC3Q9NYG2 299 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms