RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TEPSINQ96N21 525 aa30.54■■■□□ 2.48
FOXA1-204ENST00000554607 PUS3Q9BZE2 481 aaKnown RBP30.54■■■□□ 2.48
FOXA1-204ENST00000554607 RIPOR2Q9Y4F9 1068 aa30.54■■■□□ 2.48
FOXA1-204ENST00000554607 TCP10L2B9ZVM9 353 aa30.53■■■□□ 2.48
FOXA1-204ENST00000554607 MAP3K9P80192 1104 aa30.53■■■□□ 2.48
FOXA1-204ENST00000554607 ARHGEF6Q15052 776 aa30.53■■■□□ 2.48
FOXA1-204ENST00000554607 MS4A4AQ96JQ5 239 aa30.53■■■□□ 2.48
FOXA1-204ENST00000554607 HDLBPQ00341 1268 aaKnown RBP30.52■■■□□ 2.48
FOXA1-204ENST00000554607 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.52■■■□□ 2.48
FOXA1-204ENST00000554607 TBC1D22AQ8WUA7 517 aa30.52■■■□□ 2.48
FOXA1-204ENST00000554607 KAZALD1Q96I82 304 aa30.52■■■□□ 2.48
FOXA1-204ENST00000554607 GTF2A2P52657 109 aa30.51■■■□□ 2.47
FOXA1-204ENST00000554607 CAVIN4Q5BKX8 364 aa30.51■■■□□ 2.47
FOXA1-204ENST00000554607 FBXO33Q7Z6M2 555 aa30.51■■■□□ 2.47
FOXA1-204ENST00000554607 ARMC5Q96C12 935 aa30.51■■■□□ 2.47
FOXA1-204ENST00000554607 CSADQ9Y600 493 aa30.51■■■□□ 2.47
FOXA1-204ENST00000554607 UTYO14607 1347 aa30.5■■■□□ 2.47
FOXA1-204ENST00000554607 POTEFA5A3E0 1075 aa30.5■■■□□ 2.47
FOXA1-204ENST00000554607 FRAT2O75474 233 aaPredicted RBP30.5■■■□□ 2.47
FOXA1-204ENST00000554607 NBPF7P0C2Y1 421 aaPredicted RBP30.5■■■□□ 2.47
FOXA1-204ENST00000554607 TMEM39BQ9GZU3 492 aa30.5■■■□□ 2.47
FOXA1-204ENST00000554607 ZFYVE28Q9HCC9 887 aa30.5■■■□□ 2.47
FOXA1-204ENST00000554607 HTTP42858 3142 aa30.5■■■□□ 2.47
FOXA1-204ENST00000554607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.49■■■□□ 2.47
FOXA1-204ENST00000554607 VGLL4Q14135 290 aa30.48■■■□□ 2.47
FOXA1-204ENST00000554607 CDAN1Q8IWY9 1227 aa30.48■■■□□ 2.47
FOXA1-204ENST00000554607 BRI3BPQ8WY22 251 aa30.48■■■□□ 2.47
FOXA1-204ENST00000554607 OTOFQ9HC10 1997 aa30.48■■■□□ 2.47
FOXA1-204ENST00000554607 ARAP2Q8WZ64 1704 aa30.47■■■□□ 2.47
FOXA1-204ENST00000554607 CCL15-CCL14A0A0B4J2E2 113 aa30.47■■■□□ 2.47
FOXA1-204ENST00000554607 WDHD1O75717 1129 aaPredicted RBP30.47■■■□□ 2.47
FOXA1-204ENST00000554607 CHAF1AQ13111 956 aaPredicted RBP30.47■■■□□ 2.47
FOXA1-204ENST00000554607 TAF1CQ15572 869 aaPredicted RBP30.47■■■□□ 2.47
FOXA1-204ENST00000554607 CCL15Q16663 113 aa30.47■■■□□ 2.47
FOXA1-204ENST00000554607 RABL6Q3YEC7 729 aaPredicted RBP30.47■■■□□ 2.47
FOXA1-204ENST00000554607 METTL24Q5JXM2 366 aa30.47■■■□□ 2.47
FOXA1-204ENST00000554607 TEKT1Q969V4 418 aa30.47■■■□□ 2.47
FOXA1-204ENST00000554607 MRIQ9BWK5 157 aa30.47■■■□□ 2.47
FOXA1-204ENST00000554607 BICC1Q9H694 974 aaKnown RBP30.47■■■□□ 2.47
FOXA1-204ENST00000554607 HOOK2Q96ED9 719 aa30.46■■■□□ 2.47
FOXA1-204ENST00000554607 IQSEC3Q9UPP2 1182 aaPredicted RBP30.46■■■□□ 2.47
FOXA1-204ENST00000554607 PDE8BO95263 885 aa30.45■■■□□ 2.47
FOXA1-204ENST00000554607 CNKSR2Q8WXI2 1034 aa30.45■■■□□ 2.47
FOXA1-204ENST00000554607 TMEM106CQ9BVX2 250 aa30.45■■■□□ 2.47
FOXA1-204ENST00000554607 TMOD2Q9NZR1 351 aa30.45■■■□□ 2.47
FOXA1-204ENST00000554607 GRIK5Q16478 980 aa30.44■■■□□ 2.46
FOXA1-204ENST00000554607 LRRC24Q50LG9 513 aa30.44■■■□□ 2.46
FOXA1-204ENST00000554607 OTUD5Q96G74 571 aa30.44■■■□□ 2.46
FOXA1-204ENST00000554607 KIAA0100Q14667 2235 aaKnown RBP30.43■■■□□ 2.46
FOXA1-204ENST00000554607 NBPF11Q86T75 865 aa30.43■■■□□ 2.46
FOXA1-204ENST00000554607 ZDHHC15Q96MV8 337 aa30.43■■■□□ 2.46
FOXA1-204ENST00000554607 SUGT1Q9Y2Z0 365 aa30.43■■■□□ 2.46
FOXA1-204ENST00000554607 RBBP6Q7Z6E9 1792 aaKnown RBP30.43■■■□□ 2.46
FOXA1-204ENST00000554607 MAST3O60307 1309 aa30.43■■■□□ 2.46
FOXA1-204ENST00000554607 SPDYE5A6NIY4 337 aa30.42■■■□□ 2.46
FOXA1-204ENST00000554607 FKBP1CQ5VVH2 108 aa30.42■■■□□ 2.46
FOXA1-204ENST00000554607 FAM83AQ86UY5 434 aa30.42■■■□□ 2.46
FOXA1-204ENST00000554607 CETPP11597 493 aa30.41■■■□□ 2.46
FOXA1-204ENST00000554607 FAM43AQ8N2R8 423 aa30.41■■■□□ 2.46
FOXA1-204ENST00000554607 ANKRD44Q8N8A2 993 aa30.41■■■□□ 2.46
FOXA1-204ENST00000554607 VGLL2Q8N8G2 317 aa30.41■■■□□ 2.46
FOXA1-204ENST00000554607 ZCCHC17Q9NP64 241 aaKnown RBP30.41■■■□□ 2.46
FOXA1-204ENST00000554607 CENPFP49454 3210 aa30.41■■■□□ 2.46
FOXA1-204ENST00000554607 EN2P19622 333 aaPredicted RBP30.4■■■□□ 2.46
FOXA1-204ENST00000554607 CAP1Q01518 475 aa30.4■■■□□ 2.46
FOXA1-204ENST00000554607 ERO1BQ86YB8 467 aa30.4■■■□□ 2.46
FOXA1-204ENST00000554607 FAM9BQ8IZU0 186 aa30.4■■■□□ 2.46
FOXA1-204ENST00000554607 IFIT1P09914 478 aaKnown RBP30.39■■■□□ 2.46
FOXA1-204ENST00000554607 BCAMP50895 628 aa30.39■■■□□ 2.46
FOXA1-204ENST00000554607 CACNB3P54284 484 aa30.39■■■□□ 2.46
FOXA1-204ENST00000554607 SLC9C1Q4G0N8 1177 aa30.39■■■□□ 2.46
FOXA1-204ENST00000554607 ZNF333Q96JL9 665 aa30.39■■■□□ 2.46
FOXA1-204ENST00000554607 PTPRCP08575 1304 aa30.39■■■□□ 2.46
FOXA1-204ENST00000554607 KIF16BQ96L93 1317 aa30.39■■■□□ 2.46
FOXA1-204ENST00000554607 MKI67P46013 3256 aaKnown RBP30.38■■■□□ 2.45
FOXA1-204ENST00000554607 KIF22Q14807 665 aa30.38■■■□□ 2.45
FOXA1-204ENST00000554607 DCAF15Q66K64 600 aa30.38■■■□□ 2.45
FOXA1-204ENST00000554607 MRPL50Q8N5N7 158 aaKnown RBP30.38■■■□□ 2.45
FOXA1-204ENST00000554607 WRNIP1Q96S55 665 aa30.38■■■□□ 2.45
FOXA1-204ENST00000554607 SNCAIPQ9Y6H5 919 aa30.38■■■□□ 2.45
FOXA1-204ENST00000554607 SNAPC2Q13487 334 aa30.37■■■□□ 2.45
FOXA1-204ENST00000554607 PUM3Q15397 648 aaKnown RBP30.37■■■□□ 2.45
FOXA1-204ENST00000554607 APOBEC3HQ6NTF7 200 aaKnown RBP30.37■■■□□ 2.45
FOXA1-204ENST00000554607 HHIPL2Q6UWX4 724 aa30.37■■■□□ 2.45
FOXA1-204ENST00000554607 TLR2O60603 784 aa30.36■■■□□ 2.45
FOXA1-204ENST00000554607 PTCH2Q9Y6C5 1203 aa30.36■■■□□ 2.45
FOXA1-204ENST00000554607 PPIL2Q13356 520 aa30.35■■■□□ 2.45
FOXA1-204ENST00000554607 HABP4Q5JVS0 413 aaKnown RBP30.35■■■□□ 2.45
FOXA1-204ENST00000554607 ZKSCAN4Q969J2 545 aaPredicted RBP30.35■■■□□ 2.45
FOXA1-204ENST00000554607 GNRH1P01148 92 aa30.34■■■□□ 2.45
FOXA1-204ENST00000554607 KLHDC4Q8TBB5 520 aa30.34■■■□□ 2.45
FOXA1-204ENST00000554607 RPAP1Q9BWH6 1393 aaPredicted RBP30.33■■■□□ 2.45
FOXA1-204ENST00000554607 BTBD19C9JJ37 291 aa30.33■■■□□ 2.45
FOXA1-204ENST00000554607 IRF6O14896 467 aa30.33■■■□□ 2.45
FOXA1-204ENST00000554607 FGFR2P21802 821 aa30.33■■■□□ 2.45
FOXA1-204ENST00000554607 SLC4A8Q2Y0W8 1093 aa30.33■■■□□ 2.45
FOXA1-204ENST00000554607 WDR66Q8TBY9 1149 aa30.33■■■□□ 2.45
FOXA1-204ENST00000554607 ZNF341Q9BYN7 854 aa30.33■■■□□ 2.45
FOXA1-204ENST00000554607 USP44Q9H0E7 712 aa30.33■■■□□ 2.45
FOXA1-204ENST00000554607 ZNF521Q96K83 1311 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms