RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567	GRIK5	Q16478	980 aa		33.42	■■■□□ 2.94
KTN1-215	ENST00000554567	LRRC24	Q50LG9	513 aa		33.42	■■■□□ 2.94
KTN1-215	ENST00000554567	CD99L2	Q8TCZ2	262 aa		33.42	■■■□□ 2.94
KTN1-215	ENST00000554567	ERO1A	Q96HE7	468 aa		33.42	■■■□□ 2.94
KTN1-215	ENST00000554567	TMEM39B	Q9GZU3	492 aa		33.42	■■■□□ 2.94
KTN1-215	ENST00000554567	METTL24	Q5JXM2	366 aa		33.41	■■■□□ 2.94
KTN1-215	ENST00000554567	TEPSIN	Q96N21	525 aa		33.41	■■■□□ 2.94
KTN1-215	ENST00000554567	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.4	■■■□□ 2.94
KTN1-215	ENST00000554567	TNNI2	P48788	182 aa		33.4	■■■□□ 2.94
KTN1-215	ENST00000554567	FBXO33	Q7Z6M2	555 aa		33.4	■■■□□ 2.94
KTN1-215	ENST00000554567	UTY	O14607	1347 aa		33.39	■■■□□ 2.94
KTN1-215	ENST00000554567	CAVIN4	Q5BKX8	364 aa		33.39	■■■□□ 2.94
KTN1-215	ENST00000554567	CNKSR2	Q8WXI2	1034 aa		33.39	■■■□□ 2.94
KTN1-215	ENST00000554567	TESPA1	A2RU30	521 aa	Predicted RBP	33.38	■■■□□ 2.93
KTN1-215	ENST00000554567	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	33.38	■■■□□ 2.93
KTN1-215	ENST00000554567	RABL6	Q3YEC7	729 aa	Predicted RBP	33.37	■■■□□ 2.93
KTN1-215	ENST00000554567	ANKRD44	Q8N8A2	993 aa		33.37	■■■□□ 2.93
KTN1-215	ENST00000554567	PTPN22	Q9Y2R2	807 aa		33.37	■■■□□ 2.93
KTN1-215	ENST00000554567	LAMB1	P07942	1786 aa		33.37	■■■□□ 2.93
KTN1-215	ENST00000554567	OTOF	Q9HC10	1997 aa		33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	CACNB3	P54284	484 aa		33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	MAP3K9	P80192	1104 aa		33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	SP3	Q02447	781 aa		33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	MRPL50	Q8N5N7	158 aa	Known RBP	33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	KLHDC4	Q8TBB5	520 aa		33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	MS4A4A	Q96JQ5	239 aa		33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	EFCC1	Q9HA90	598 aa		33.36	■■■□□ 2.93
KTN1-215	ENST00000554567	VGLL4	Q14135	290 aa		33.35	■■■□□ 2.93
KTN1-215	ENST00000554567	TBC1D22A	Q8WUA7	517 aa		33.35	■■■□□ 2.93
KTN1-215	ENST00000554567	ARAP2	Q8WZ64	1704 aa		33.34	■■■□□ 2.93
KTN1-215	ENST00000554567	PDE8B	O95263	885 aa		33.34	■■■□□ 2.93
KTN1-215	ENST00000554567	ZEB1	P37275	1124 aa	Predicted RBP	33.34	■■■□□ 2.93
KTN1-215	ENST00000554567	BCAM	P50895	628 aa		33.34	■■■□□ 2.93
KTN1-215	ENST00000554567	INTS3	Q68E01	1043 aa	Known RBP	33.34	■■■□□ 2.93
KTN1-215	ENST00000554567	TEKT1	Q969V4	418 aa		33.34	■■■□□ 2.93
KTN1-215	ENST00000554567	CSAD	Q9Y600	493 aa		33.34	■■■□□ 2.93
KTN1-215	ENST00000554567	POTEF	A5A3E0	1075 aa		33.33	■■■□□ 2.93
KTN1-215	ENST00000554567	BRI3BP	Q8WY22	251 aa		33.33	■■■□□ 2.93
KTN1-215	ENST00000554567	OTUD5	Q96G74	571 aa		33.33	■■■□□ 2.93
KTN1-215	ENST00000554567	CCL15-CCL14	A0A0B4J2E2	113 aa		33.32	■■■□□ 2.92
KTN1-215	ENST00000554567	HDLBP	Q00341	1268 aa	Known RBP	33.32	■■■□□ 2.92
KTN1-215	ENST00000554567	CCL15	Q16663	113 aa		33.32	■■■□□ 2.92
KTN1-215	ENST00000554567	VGLL2	Q8N8G2	317 aa		33.32	■■■□□ 2.92
KTN1-215	ENST00000554567	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	33.32	■■■□□ 2.92
KTN1-215	ENST00000554567	GTF2A2	P52657	109 aa		33.31	■■■□□ 2.92
KTN1-215	ENST00000554567	CAP1	Q01518	475 aa		33.31	■■■□□ 2.92
KTN1-215	ENST00000554567	TAF1C	Q15572	869 aa	Predicted RBP	33.31	■■■□□ 2.92
KTN1-215	ENST00000554567	TMOD2	Q9NZR1	351 aa		33.3	■■■□□ 2.92
KTN1-215	ENST00000554567	ZNF521	Q96K83	1311 aa		33.29	■■■□□ 2.92
KTN1-215	ENST00000554567	ZFYVE28	Q9HCC9	887 aa		33.29	■■■□□ 2.92
KTN1-215	ENST00000554567	PCDH10	Q9P2E7	1040 aa		33.29	■■■□□ 2.92
KTN1-215	ENST00000554567	PTPRC	P08575	1304 aa		33.28	■■■□□ 2.92
KTN1-215	ENST00000554567	USP44	Q9H0E7	712 aa		33.28	■■■□□ 2.92
KTN1-215	ENST00000554567	HTT	P42858	3142 aa		33.28	■■■□□ 2.92
KTN1-215	ENST00000554567	IFIT1	P09914	478 aa	Known RBP	33.27	■■■□□ 2.92
KTN1-215	ENST00000554567	FAM43A	Q8N2R8	423 aa		33.27	■■■□□ 2.92
KTN1-215	ENST00000554567	SSH1	Q8WYL5	1049 aa		33.27	■■■□□ 2.92
KTN1-215	ENST00000554567	ZDHHC15	Q96MV8	337 aa		33.27	■■■□□ 2.92
KTN1-215	ENST00000554567	PUM3	Q15397	648 aa	Known RBP	33.26	■■■□□ 2.91
KTN1-215	ENST00000554567	APOBEC3H	Q6NTF7	200 aa	Known RBP	33.25	■■■□□ 2.91
KTN1-215	ENST00000554567	ZKSCAN4	Q969J2	545 aa	Predicted RBP	33.25	■■■□□ 2.91
KTN1-215	ENST00000554567	WRNIP1	Q96S55	665 aa		33.25	■■■□□ 2.91
KTN1-215	ENST00000554567	ARMC5	Q96C12	935 aa		33.24	■■■□□ 2.91
KTN1-215	ENST00000554567	MRI	Q9BWK5	157 aa		33.24	■■■□□ 2.91
KTN1-215	ENST00000554567	SNCAIP	Q9Y6H5	919 aa		33.24	■■■□□ 2.91
KTN1-215	ENST00000554567	SPDYE5	A6NIY4	337 aa		33.23	■■■□□ 2.91
KTN1-215	ENST00000554567	ARHGEF6	Q15052	776 aa		33.23	■■■□□ 2.91
KTN1-215	ENST00000554567	FAM83A	Q86UY5	434 aa		33.23	■■■□□ 2.91
KTN1-215	ENST00000554567	MAST3	O60307	1309 aa		33.23	■■■□□ 2.91
KTN1-215	ENST00000554567	EN2	P19622	333 aa	Predicted RBP	33.22	■■■□□ 2.91
KTN1-215	ENST00000554567	FGFR2	P21802	821 aa		33.22	■■■□□ 2.91
KTN1-215	ENST00000554567	ERO1B	Q86YB8	467 aa		33.22	■■■□□ 2.91
KTN1-215	ENST00000554567	SUGT1	Q9Y2Z0	365 aa		33.22	■■■□□ 2.91
KTN1-215	ENST00000554567	CETP	P11597	493 aa		33.21	■■■□□ 2.91
KTN1-215	ENST00000554567	HOOK2	Q96ED9	719 aa		33.21	■■■□□ 2.91
KTN1-215	ENST00000554567	CENPF	P49454	3210 aa		33.2	■■■□□ 2.91
KTN1-215	ENST00000554567		E9PSI1	815 aa		33.2	■■■□□ 2.91
KTN1-215	ENST00000554567	EYA2	O00167	538 aa		33.2	■■■□□ 2.91
KTN1-215	ENST00000554567	WDHD1	O75717	1129 aa	Predicted RBP	33.2	■■■□□ 2.91
KTN1-215	ENST00000554567	SLC5A1	P13866	664 aa		33.2	■■■□□ 2.91
KTN1-215	ENST00000554567	FKBP1C	Q5VVH2	108 aa		33.2	■■■□□ 2.91
KTN1-215	ENST00000554567	HHIPL2	Q6UWX4	724 aa		33.2	■■■□□ 2.91
KTN1-215	ENST00000554567	MIGA2	Q7L4E1	593 aa		33.2	■■■□□ 2.91
KTN1-215	ENST00000554567	TMEM106C	Q9BVX2	250 aa		33.19	■■■□□ 2.9
KTN1-215	ENST00000554567	PTCH2	Q9Y6C5	1203 aa		33.19	■■■□□ 2.9
KTN1-215	ENST00000554567	KIF16B	Q96L93	1317 aa		33.19	■■■□□ 2.9
KTN1-215	ENST00000554567	IRF6	O14896	467 aa		33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	RFX5	P48382	616 aa	Predicted RBP	33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	SNAPC2	Q13487	334 aa		33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	SLC9C1	Q4G0N8	1177 aa		33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	DCAF15	Q66K64	600 aa		33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	WDR66	Q8TBY9	1149 aa		33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	LPIN2	Q92539	896 aa		33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	KIAA0100	Q14667	2235 aa	Known RBP	33.18	■■■□□ 2.9
KTN1-215	ENST00000554567	MKI67	P46013	3256 aa	Known RBP	33.17	■■■□□ 2.9
KTN1-215	ENST00000554567	BTBD19	C9JJ37	291 aa		33.17	■■■□□ 2.9
KTN1-215	ENST00000554567	MYC	P01106	439 aa	Predicted RBP	33.16	■■■□□ 2.9
KTN1-215	ENST00000554567	NBPF11	Q86T75	865 aa		33.16	■■■□□ 2.9
KTN1-215	ENST00000554567	ZNF341	Q9BYN7	854 aa		33.16	■■■□□ 2.9
KTN1-215	ENST00000554567	TLR2	O60603	784 aa		33.15	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms