RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 MLLT1Q03111 559 aaPredicted RBP27.43■■□□□ 1.98
RCCD1-202ENST00000554302 GRIK5Q16478 980 aa27.43■■□□□ 1.98
RCCD1-202ENST00000554302 CAVIN4Q5BKX8 364 aa27.43■■□□□ 1.98
RCCD1-202ENST00000554302 DZIP1LQ8IYY4 767 aaKnown RBP27.43■■□□□ 1.98
RCCD1-202ENST00000554302 SLC10A4Q96EP9 437 aa27.43■■□□□ 1.98
RCCD1-202ENST00000554302 SMC4Q9NTJ3 1288 aa27.43■■□□□ 1.98
RCCD1-202ENST00000554302 USP2O75604 605 aaPredicted RBP27.42■■□□□ 1.98
RCCD1-202ENST00000554302 CRKP46108 304 aa27.42■■□□□ 1.98
RCCD1-202ENST00000554302 TNFAIP1Q13829 316 aa27.42■■□□□ 1.98
RCCD1-202ENST00000554302 VPS37DQ86XT2 251 aa27.42■■□□□ 1.98
RCCD1-202ENST00000554302 CLMNQ96JQ2 1002 aa27.42■■□□□ 1.98
RCCD1-202ENST00000554302 TDRD3Q9H7E2 651 aaKnown RBP27.42■■□□□ 1.98
RCCD1-202ENST00000554302 GPR25O00155 361 aa27.41■■□□□ 1.98
RCCD1-202ENST00000554302 INHBEP58166 350 aa27.41■■□□□ 1.98
RCCD1-202ENST00000554302 HDLBPQ00341 1268 aaKnown RBP27.41■■□□□ 1.98
RCCD1-202ENST00000554302 TBC1D22AQ8WUA7 517 aa27.41■■□□□ 1.98
RCCD1-202ENST00000554302 WNK4Q96J92 1243 aa27.41■■□□□ 1.98
RCCD1-202ENST00000554302 IQSEC3Q9UPP2 1182 aaPredicted RBP27.41■■□□□ 1.98
RCCD1-202ENST00000554302 MANSC4A6NHS7 340 aaPredicted RBP27.4■■□□□ 1.98
RCCD1-202ENST00000554302 TEPSINQ96N21 525 aa27.4■■□□□ 1.98
RCCD1-202ENST00000554302 TNRC18O15417 2968 aaPredicted RBP27.39■■□□□ 1.98
RCCD1-202ENST00000554302 EYA2O00167 538 aa27.39■■□□□ 1.98
RCCD1-202ENST00000554302 IREB2P48200 963 aaKnown RBP27.39■■□□□ 1.98
RCCD1-202ENST00000554302 BCAMP50895 628 aa27.39■■□□□ 1.98
RCCD1-202ENST00000554302 PUM3Q15397 648 aaKnown RBP27.39■■□□□ 1.98
RCCD1-202ENST00000554302 MRIQ9BWK5 157 aa27.39■■□□□ 1.98
RCCD1-202ENST00000554302 ALDH1A1P00352 501 aa27.38■■□□□ 1.97
RCCD1-202ENST00000554302 PKN2Q16513 984 aaKnown RBP27.38■■□□□ 1.97
RCCD1-202ENST00000554302 R3HDMLQ9H3Y0 253 aa27.38■■□□□ 1.97
RCCD1-202ENST00000554302 CCER2I3L3R5 266 aa27.37■■□□□ 1.97
RCCD1-202ENST00000554302 CHAF1AQ13111 956 aaPredicted RBP27.37■■□□□ 1.97
RCCD1-202ENST00000554302 ATG9AQ7Z3C6 839 aa27.37■■□□□ 1.97
RCCD1-202ENST00000554302 IFNL1Q8IU54 200 aa27.37■■□□□ 1.97
RCCD1-202ENST00000554302 ANKRD13AQ8IZ07 590 aa27.37■■□□□ 1.97
RCCD1-202ENST00000554302 IFIT1P09914 478 aaKnown RBP27.36■■□□□ 1.97
RCCD1-202ENST00000554302 CDAN1Q8IWY9 1227 aa27.36■■□□□ 1.97
RCCD1-202ENST00000554302 FBXO3Q9UK99 471 aa27.36■■□□□ 1.97
RCCD1-202ENST00000554302 NOB1Q9ULX3 412 aaKnown RBP27.36■■□□□ 1.97
RCCD1-202ENST00000554302 SUGT1Q9Y2Z0 365 aa27.36■■□□□ 1.97
RCCD1-202ENST00000554302 OTOFQ9HC10 1997 aa27.36■■□□□ 1.97
RCCD1-202ENST00000554302 FRAT2O75474 233 aaPredicted RBP27.35■■□□□ 1.97
RCCD1-202ENST00000554302 GJA5P36382 358 aa27.35■■□□□ 1.97
RCCD1-202ENST00000554302 LPIN2Q92539 896 aa27.35■■□□□ 1.97
RCCD1-202ENST00000554302 TCP10L2B9ZVM9 353 aa27.34■■□□□ 1.97
RCCD1-202ENST00000554302 TEKT1Q969V4 418 aa27.34■■□□□ 1.97
RCCD1-202ENST00000554302 ZDHHC15Q96MV8 337 aa27.34■■□□□ 1.97
RCCD1-202ENST00000554302 HPS5Q9UPZ3 1129 aa27.34■■□□□ 1.97
RCCD1-202ENST00000554302 IGF2BP3O00425 579 aaKnown RBP eCLIP27.33■■□□□ 1.97
RCCD1-202ENST00000554302 FKTNO75072 461 aa27.33■■□□□ 1.97
RCCD1-202ENST00000554302 UBTFL1P0CB47 393 aaPredicted RBP27.33■■□□□ 1.97
RCCD1-202ENST00000554302 TNNI2P48788 182 aa27.33■■□□□ 1.97
RCCD1-202ENST00000554302 API5Q9BZZ5 524 aaKnown RBP27.33■■□□□ 1.97
RCCD1-202ENST00000554302 TMEM39BQ9GZU3 492 aa27.33■■□□□ 1.97
RCCD1-202ENST00000554302 TESPA1A2RU30 521 aaPredicted RBP27.32■■□□□ 1.96
RCCD1-202ENST00000554302 CIAO1O76071 339 aa27.32■■□□□ 1.96
RCCD1-202ENST00000554302 SLC5A1P13866 664 aa27.31■■□□□ 1.96
RCCD1-202ENST00000554302 APOBEC3HQ6NTF7 200 aaKnown RBP27.31■■□□□ 1.96
RCCD1-202ENST00000554302 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.31■■□□□ 1.96
RCCD1-202ENST00000554302 RARSP54136 660 aaKnown RBP27.3■■□□□ 1.96
RCCD1-202ENST00000554302 FKBP1CQ5VVH2 108 aa27.3■■□□□ 1.96
RCCD1-202ENST00000554302 HHIPL2Q6UWX4 724 aa27.3■■□□□ 1.96
RCCD1-202ENST00000554302 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.3■■□□□ 1.96
RCCD1-202ENST00000554302 MAST3O60307 1309 aa27.3■■□□□ 1.96
RCCD1-202ENST00000554302 HTTP42858 3142 aa27.29■■□□□ 1.96
RCCD1-202ENST00000554302 FAM83AQ86UY5 434 aa27.29■■□□□ 1.96
RCCD1-202ENST00000554302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.29■■□□□ 1.96
RCCD1-202ENST00000554302 WDR66Q8TBY9 1149 aa27.29■■□□□ 1.96
RCCD1-202ENST00000554302 PTPN18Q99952 460 aa27.29■■□□□ 1.96
RCCD1-202ENST00000554302 CACNB3P54284 484 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 SOX10P56693 466 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 FBXO46Q6PJ61 603 aaPredicted RBP27.28■■□□□ 1.96
RCCD1-202ENST00000554302 ARHGAP45Q92619 1136 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 OPTNQ96CV9 577 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 MS4A4AQ96JQ5 239 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 ELP3Q9H9T3 547 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 HDAC5Q9UQL6 1122 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 LRRFIP2Q9Y608 721 aaKnown RBP27.28■■□□□ 1.96
RCCD1-202ENST00000554302 MYH13Q9UKX3 1938 aa27.28■■□□□ 1.96
RCCD1-202ENST00000554302 MAP3K9P80192 1104 aa27.27■■□□□ 1.96
RCCD1-202ENST00000554302 SIL1Q9H173 461 aa27.27■■□□□ 1.96
RCCD1-202ENST00000554302 VGLL4Q14135 290 aa27.26■■□□□ 1.95
RCCD1-202ENST00000554302 ATP2B3Q16720 1220 aa27.26■■□□□ 1.95
RCCD1-202ENST00000554302 COPRSQ9NQ92 184 aa27.26■■□□□ 1.95
RCCD1-202ENST00000554302 CEP126Q9P2H0 1117 aa27.26■■□□□ 1.95
RCCD1-202ENST00000554302 IL15P40933 162 aaPredicted RBP27.25■■□□□ 1.95
RCCD1-202ENST00000554302 INTS3Q68E01 1043 aaKnown RBP27.25■■□□□ 1.95
RCCD1-202ENST00000554302 OTUD7BQ6GQQ9 843 aa27.25■■□□□ 1.95
RCCD1-202ENST00000554302 MEIS3Q99687 375 aa27.25■■□□□ 1.95
RCCD1-202ENST00000554302 RPAP1Q9BWH6 1393 aaPredicted RBP27.24■■□□□ 1.95
RCCD1-202ENST00000554302 TMOD2Q9NZR1 351 aa27.24■■□□□ 1.95
RCCD1-202ENST00000554302 CRHR2Q13324 411 aa27.23■■□□□ 1.95
RCCD1-202ENST00000554302 PA2G4Q9UQ80 394 aaKnown RBP27.23■■□□□ 1.95
RCCD1-202ENST00000554302 SALL1Q9NSC2 1324 aa27.22■■□□□ 1.95
RCCD1-202ENST00000554302 SPDYE5A6NIY4 337 aa27.21■■□□□ 1.95
RCCD1-202ENST00000554302 SEMA3EO15041 775 aa27.21■■□□□ 1.95
RCCD1-202ENST00000554302 BRI3BPQ8WY22 251 aa27.21■■□□□ 1.95
RCCD1-202ENST00000554302 HOOK2Q96ED9 719 aa27.21■■□□□ 1.95
RCCD1-202ENST00000554302 GNL3LQ9NVN8 582 aaKnown RBP27.21■■□□□ 1.95
RCCD1-202ENST00000554302 DAGLAQ9Y4D2 1042 aa27.21■■□□□ 1.95
RCCD1-202ENST00000554302 CSADQ9Y600 493 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms