RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 SPRYD7Q5W111 196 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 DIEXFQ68CQ4 756 aaKnown RBP8.1□□□□□ -1.11
FOXN3-205ENST00000553904 HHIPL2Q6UWX4 724 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 ZGPATQ8N5A5 531 aaKnown RBP8.1□□□□□ -1.11
FOXN3-205ENST00000553904 TDRD3Q9H7E2 651 aaKnown RBP8.1□□□□□ -1.11
FOXN3-205ENST00000553904 DENND2AQ9ULE3 1009 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 SCAF8Q9UPN6 1271 aaKnown RBP8.1□□□□□ -1.11
FOXN3-205ENST00000553904 JAG2Q9Y219 1238 aa8.1□□□□□ -1.11
FOXN3-205ENST00000553904 MYH3P11055 1940 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 FGFR2P21802 821 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 RFX5P48382 616 aaPredicted RBP8.09□□□□□ -1.11
FOXN3-205ENST00000553904 ATP2B3Q16720 1220 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 FKBP1CQ5VVH2 108 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 ATF7IPQ6VMQ6 1270 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 MOB2Q70IA6 237 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 VGLL2Q8N8G2 317 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 KLHDC4Q8TBB5 520 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 FRAT1Q92837 279 aaPredicted RBP8.09□□□□□ -1.11
FOXN3-205ENST00000553904 ZDHHC15Q96MV8 337 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 MCOLN1Q9GZU1 580 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 COPRSQ9NQ92 184 aa8.09□□□□□ -1.11
FOXN3-205ENST00000553904 IQSEC3Q9UPP2 1182 aaPredicted RBP8.09□□□□□ -1.11
FOXN3-205ENST00000553904 LRRFIP2Q9Y608 721 aaKnown RBP8.09□□□□□ -1.11
FOXN3-205ENST00000553904 TCP10L2B9ZVM9 353 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 USP2O75604 605 aaPredicted RBP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 GNAI2P04899 355 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 LDHBP07195 334 aaKnown RBP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 MAP3K9P80192 1104 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 HNRNPUQ00839 825 aaKnown RBP eCLIP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 G3BP1Q13283 466 aaKnown RBP eCLIP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 ARHGEF6Q15052 776 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 GORABQ5T7V8 394 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 NBPF12Q5TAG4 269 aaPredicted RBP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 DCAF15Q66K64 600 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 SPTY2D1Q68D10 685 aaPredicted RBP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 ATG9AQ7Z3C6 839 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 CTU1Q7Z7A3 348 aaKnown RBP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 FAM83AQ86UY5 434 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 CFHR5Q9BXR6 569 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 SIL1Q9H173 461 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.08□□□□□ -1.12
FOXN3-205ENST00000553904 CSADQ9Y600 493 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 SCN9AQ15858 1988 aa8.08□□□□□ -1.12
FOXN3-205ENST00000553904 GPR25O00155 361 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 ZBTB22O15209 634 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 SRGAP3O43295 1099 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 FKTNO75072 461 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 TBC1D8O95759 1140 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 MS4A1P11836 297 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 MKRN3Q13064 507 aaKnown RBP8.07□□□□□ -1.12
FOXN3-205ENST00000553904 MVPQ14764 893 aaKnown RBP8.07□□□□□ -1.12
FOXN3-205ENST00000553904 ZKSCAN2Q63HK3 967 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 MEIS3Q99687 375 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 PCDHAC2Q9Y5I4 1007 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 PAPPA2Q9BXP8 1791 aa8.07□□□□□ -1.12
FOXN3-205ENST00000553904 LDHCP07864 332 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 TRIM27P14373 513 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 GTF2A2P52657 109 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 MLLT1Q03111 559 aaPredicted RBP8.06□□□□□ -1.12
FOXN3-205ENST00000553904 MTX1Q13505 466 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 IFNL1Q8IU54 200 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 ZNF296Q8WUU4 475 aaPredicted RBP8.06□□□□□ -1.12
FOXN3-205ENST00000553904 WNK4Q96J92 1243 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 NEUROD6Q96NK8 337 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 THSD7BQ9C0I4 1608 aa8.06□□□□□ -1.12
FOXN3-205ENST00000553904 SALL1Q9NSC2 1324 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 BCAR3O75815 825 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 RGS19P49795 217 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 TIMM10P62072 90 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 GSTO1P78417 241 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 CCDC102BQ68D86 513 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 APOBEC3HQ6NTF7 200 aaKnown RBP8.05□□□□□ -1.12
FOXN3-205ENST00000553904 ERO1BQ86YB8 467 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 FTSJ3Q8IY81 847 aaKnown RBP8.05□□□□□ -1.12
FOXN3-205ENST00000553904 MIER1Q8N108 512 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 FAM151AQ8WW52 585 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 CLUAP1Q96AJ1 413 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 OPTNQ96CV9 577 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 TMEM39BQ9GZU3 492 aa8.05□□□□□ -1.12
FOXN3-205ENST00000553904 CHMP4BQ9H444 224 aaKnown RBP8.05□□□□□ -1.12
FOXN3-205ENST00000553904 PA2G4Q9UQ80 394 aaKnown RBP8.05□□□□□ -1.12
FOXN3-205ENST00000553904 PSME4Q14997 1843 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 A0A1B0GUL7 405 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-205ENST00000553904 IGSF3O75054 1194 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 MAP4K4O95819 1239 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-205ENST00000553904 UQCRFS1P1P0C7P4 283 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 CETPP11597 493 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 TFCP2Q12800 502 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 OS9Q13438 667 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-205ENST00000553904 CCDC158Q5M9N0 1113 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 FBXO46Q6PJ61 603 aaPredicted RBP8.04□□□□□ -1.12
FOXN3-205ENST00000553904 ERICH6Q7L0X2 663 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 DZIP1Q86YF9 867 aaKnown RBP8.04□□□□□ -1.12
FOXN3-205ENST00000553904 XAGE2Q96GT9 111 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 ERO1AQ96HE7 468 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 CLMNQ96JQ2 1002 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 TEPSINQ96N21 525 aa8.04□□□□□ -1.12
FOXN3-205ENST00000553904 ZNF341Q9BYN7 854 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms