RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 TBC1D10CQ8IV04 446 aa15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 STK11IPQ8N1F8 1099 aa15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 GDPD2Q9HCC8 539 aa15.12■□□□□ 0.01
VIPAS39-206ENST00000553888 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 POTEAQ6S8J7 498 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 ALDH8A1Q9H2A2 487 aaPredicted RBP15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 RAI14Q9P0K7 980 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 ANKIB1Q9P2G1 1089 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 NAP1L2Q9ULW6 460 aaPredicted RBP15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 CHAF1AQ13111 956 aaPredicted RBP15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 GRAPQ13588 217 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 ANKRD1Q15327 319 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 RAB11FIP4Q86YS3 637 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 GRAPLQ8TC17 118 aaPredicted RBP15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 ZNF384Q8TF68 577 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 ANKRD31Q8N7Z5 1873 aa15.11■□□□□ 0.01
VIPAS39-206ENST00000553888 ZNF213O14771 459 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 PRPF40AO75400 957 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 MSL1Q68DK7 614 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 FBXO33Q7Z6M2 555 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 LMBRD1Q9NUN5 540 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 SMIM22K7EJ46 135 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 STX6O43752 255 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 CYP7A1P22680 504 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 CCT2P78371 535 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 RPGRQ92834 1020 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 NCOA5Q9HCD5 579 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 TACC3Q9Y6A5 838 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 CTDSPL2Q05D32 466 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 SCRN1Q12765 414 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 GNL3LQ9NVN8 582 aaKnown RBP15.1■□□□□ 0.01
VIPAS39-206ENST00000553888 TNS1Q9HBL0 1735 aaKnown RBP15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 ANTXR2P58335 489 aa15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 ST5P78524 1137 aa15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 IL27Q8NEV9 243 aa15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 DYNLL1P63167 89 aaKnown RBP15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 SDR42E1Q8WUS8 393 aa15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 GTF3C6Q969F1 213 aa15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 DDX11Q96FC9 970 aa15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 ANKRD2Q9GZV1 360 aa15.09■□□□□ 0.01
VIPAS39-206ENST00000553888 WDR33Q9C0J8 1336 aaKnown RBP15.08■□□□□ 0.01
VIPAS39-206ENST00000553888 IRS2Q9Y4H2 1338 aa15.08■□□□□ 0.01
VIPAS39-206ENST00000553888 VPS37CA5D8V6 355 aaPredicted RBP15.08■□□□□ 0
VIPAS39-206ENST00000553888 GSG1L2A8MUP6 293 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 MB21D2Q8IYB1 491 aaPredicted RBP15.08■□□□□ 0
VIPAS39-206ENST00000553888 IFNL3Q8IZI9 196 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0
VIPAS39-206ENST00000553888 NEDD4P46934 1319 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 GOLGA6L22H0YM25 854 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 PLSCR1O15162 318 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 HMGB1P09429 215 aaKnown RBP15.08■□□□□ 0
VIPAS39-206ENST00000553888 ZSCAN22P10073 491 aaPredicted RBP15.08■□□□□ 0
VIPAS39-206ENST00000553888 FOSBP53539 338 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 GPSM2P81274 684 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 MTMR6Q9Y217 621 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 SLC4A4Q9Y6R1 1079 aa15.08■□□□□ 0
VIPAS39-206ENST00000553888 PRC1O43663 620 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 PRDX5P30044 214 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 CRY2Q49AN0 593 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 DDX49Q9Y6V7 483 aaKnown RBP15.07■□□□□ 0
VIPAS39-206ENST00000553888 NCLP19338 710 aaKnown RBP15.07■□□□□ 0
VIPAS39-206ENST00000553888 OLFM4Q6UX06 510 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 CYB5R4Q7L1T6 521 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 CDC37L1Q7L3B6 337 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 FERMT3Q86UX7 667 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 ZMYND15Q9H091 742 aa15.07■□□□□ 0
VIPAS39-206ENST00000553888 B4E1Z4 1266 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 PATL2C9JE40 543 aaKnown RBP15.06■□□□□ 0
VIPAS39-206ENST00000553888 NAPBQ9H115 298 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 SENP2Q9HC62 589 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
VIPAS39-206ENST00000553888 NCOA7Q8NI08 942 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 GPT2Q8TD30 523 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 AGXT2Q9BYV1 514 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 BRPF3Q9ULD4 1205 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 CCDC88AQ3V6T2 1871 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 CTDNEP1O95476 244 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 F13A1P00488 732 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 EVX2Q03828 476 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 FAM173BQ6P4H8 233 aa15.06■□□□□ 0
VIPAS39-206ENST00000553888 GRIK5Q16478 980 aa15.05■□□□□ 0
VIPAS39-206ENST00000553888 RALYLQ86SE5 291 aaKnown RBP15.05■□□□□ 0
VIPAS39-206ENST00000553888 PNPLA7Q6ZV29 1317 aa15.05■□□□□ -0
VIPAS39-206ENST00000553888 PDIA3P30101 505 aaKnown RBP15.05■□□□□ -0
VIPAS39-206ENST00000553888 TDO2P48775 406 aa15.05■□□□□ -0
VIPAS39-206ENST00000553888 MECOMQ03112 1051 aa15.05■□□□□ -0
VIPAS39-206ENST00000553888 RBM27Q9P2N5 1060 aaKnown RBP15.05■□□□□ -0
VIPAS39-206ENST00000553888 CYP2D7A0A087X1C5 515 aa15.04■□□□□ -0
VIPAS39-206ENST00000553888 MAGEB6P1A0A0J9YX57 407 aa15.04■□□□□ -0
VIPAS39-206ENST00000553888 PFKFB2O60825 505 aa15.04■□□□□ -0
VIPAS39-206ENST00000553888 MCM5P33992 734 aa15.04■□□□□ -0
VIPAS39-206ENST00000553888 NAA16Q6N069 864 aaPredicted RBP15.04■□□□□ -0
VIPAS39-206ENST00000553888 RIOK1Q9BRS2 568 aaKnown RBP15.04■□□□□ -0
VIPAS39-206ENST00000553888 XDHP47989 1333 aa15.04■□□□□ -0
VIPAS39-206ENST00000553888 GADD45BO75293 160 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms