RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 SRGAP3O43295 1099 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 PDE8BO95263 885 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 HSPA6P17066 643 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 HTRA3P83110 453 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 FMR1Q06787 632 aaKnown RBP eCLIP10.23□□□□□ -0.77
RDH11-205ENST00000553816 FSTL1Q12841 308 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 DACT2Q5SW24 774 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 MAP1SQ66K74 1059 aaPredicted RBP10.23□□□□□ -0.77
RDH11-205ENST00000553816 RSBN1LQ6PCB5 846 aaPredicted RBP10.23□□□□□ -0.77
RDH11-205ENST00000553816 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 LDHDQ86WU2 507 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 DPF2Q92785 391 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 FAM84BQ96KN1 310 aaPredicted RBP10.23□□□□□ -0.77
RDH11-205ENST00000553816 GMLQ99445 158 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 COPRSQ9NQ92 184 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 ADARB2Q9NS39 739 aaKnown RBP10.23□□□□□ -0.77
RDH11-205ENST00000553816 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 ECM29Q5VYK3 1845 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 ZNF609O15014 1411 aa10.23□□□□□ -0.77
RDH11-205ENST00000553816 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
RDH11-205ENST00000553816 IL1R1P14778 569 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 FGFR2P21802 821 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 PTPN5P54829 565 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 GTF2IP78347 998 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 TTLL5Q6EMB2 1281 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 USP50Q70EL3 339 aaPredicted RBP10.22□□□□□ -0.77
RDH11-205ENST00000553816 PNMA8AQ86V59 439 aaPredicted RBP10.22□□□□□ -0.77
RDH11-205ENST00000553816 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 FBXW7Q969H0 707 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 JAG2Q9Y219 1238 aa10.22□□□□□ -0.77
RDH11-205ENST00000553816 RPS12P25398 132 aaKnown RBP10.21□□□□□ -0.77
RDH11-205ENST00000553816 TBC1D10BQ4KMP7 808 aaPredicted RBP10.21□□□□□ -0.77
RDH11-205ENST00000553816 PPP4R3BQ5MIZ7 849 aa10.21□□□□□ -0.77
RDH11-205ENST00000553816 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.77
RDH11-205ENST00000553816 STRIP1Q5VSL9 837 aa10.21□□□□□ -0.77
RDH11-205ENST00000553816 DLK2Q6UY11 383 aa10.21□□□□□ -0.77
RDH11-205ENST00000553816 FBXO33Q7Z6M2 555 aa10.21□□□□□ -0.77
RDH11-205ENST00000553816 AGBL3Q8NEM8 1001 aa10.21□□□□□ -0.77
RDH11-205ENST00000553816 TDRD7Q8NHU6 1098 aaKnown RBP10.21□□□□□ -0.77
RDH11-205ENST00000553816 IQSEC3Q9UPP2 1182 aaPredicted RBP10.21□□□□□ -0.77
RDH11-205ENST00000553816 HDAC5Q9UQL6 1122 aa10.21□□□□□ -0.77
RDH11-205ENST00000553816 ASTN2O75129 1339 aaPredicted RBP10.21□□□□□ -0.78
RDH11-205ENST00000553816 H7C1D1 291 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 CIAO1O76071 339 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 HIBADHP31937 336 aaKnown RBP10.2□□□□□ -0.78
RDH11-205ENST00000553816 IL15P40933 162 aaPredicted RBP10.2□□□□□ -0.78
RDH11-205ENST00000553816 BCAMP50895 628 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 ATP8B2P98198 1209 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 MVPQ14764 893 aaKnown RBP10.2□□□□□ -0.78
RDH11-205ENST00000553816 ZNF804AQ7Z570 1209 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 CNTROBQ8N137 903 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 PASKQ96RG2 1323 aa10.2□□□□□ -0.78
RDH11-205ENST00000553816 MYO5AQ9Y4I1 1855 aaKnown RBP10.2□□□□□ -0.78
RDH11-205ENST00000553816 COL1A1P02452 1464 aaPredicted RBP10.19□□□□□ -0.78
RDH11-205ENST00000553816 SASH1O94885 1247 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 APLP1P51693 650 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 ZNF280AP59817 542 aaPredicted RBP10.19□□□□□ -0.78
RDH11-205ENST00000553816 TFCP2Q12800 502 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 PUM3Q15397 648 aaKnown RBP10.19□□□□□ -0.78
RDH11-205ENST00000553816 GRIK5Q16478 980 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 CEP85Q6P2H3 762 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 KIAA0825Q8IV33 1275 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 SSH3Q8TE77 659 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 CEP126Q9P2H0 1117 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 PGAP2Q9UHJ9 254 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 PCDHAC2Q9Y5I4 1007 aa10.19□□□□□ -0.78
RDH11-205ENST00000553816 FAM205AQ6ZU69 1335 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 TRAF5O00463 557 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 USP17L8P0C7I0 530 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 MS4A1P11836 297 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 ADORA1P30542 326 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 TIMM10P62072 90 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 ATP2B3Q16720 1220 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 KIF4BQ2VIQ3 1234 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 SIRT2Q8IXJ6 389 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 LPIN2Q92539 896 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 GLIS2Q9BZE0 524 aaPredicted RBP10.18□□□□□ -0.78
RDH11-205ENST00000553816 MYOZ2Q9NPC6 264 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 ZBTB40Q9NUA8 1239 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 SCAF8Q9UPN6 1271 aaKnown RBP10.18□□□□□ -0.78
RDH11-205ENST00000553816 VPS9D1Q9Y2B5 631 aa10.18□□□□□ -0.78
RDH11-205ENST00000553816 AKAP11Q9UKA4 1901 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 AOX1Q06278 1338 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 F8W031 263 aaPredicted RBP10.17□□□□□ -0.78
RDH11-205ENST00000553816 IFIT1P09914 478 aaKnown RBP10.17□□□□□ -0.78
RDH11-205ENST00000553816 SLC5A1P13866 664 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 FOXK1P85037 733 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 PDE3AQ14432 1141 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 NBPF9Q3BBW0 867 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 DNAJC5GQ8N7S2 189 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 DDX19BQ9UMR2 479 aa10.17□□□□□ -0.78
RDH11-205ENST00000553816 MYO3BQ8WXR4 1341 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 A0A1B0GUL7 405 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 WNT10BO00744 389 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 PHKA1P46020 1223 aa10.16□□□□□ -0.78
RDH11-205ENST00000553816 RRP1P56182 461 aaKnown RBP10.16□□□□□ -0.78
RDH11-205ENST00000553816 CHAF1AQ13111 956 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms