RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 C1orf127Q8N9H9 656 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 RETREG2Q8NC44 543 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 ANO2Q9NQ90 1003 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 DZANK1Q9NVP4 752 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 PRKAG2Q9UGJ0 569 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 ZC3H7BQ9UGR2 993 aaKnown RBP6.19□□□□□ -1.42
LINC00648-201ENST00000553747 SALL4Q9UJQ4 1053 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 SOX13Q9UN79 622 aa6.19□□□□□ -1.42
LINC00648-201ENST00000553747 LOC100289279A0A1B0GTE1 492 aa6.18□□□□□ -1.42
LINC00648-201ENST00000553747 NPR3P17342 541 aa6.18□□□□□ -1.42
LINC00648-201ENST00000553747 ZNF211Q13398 564 aaPredicted RBP6.18□□□□□ -1.42
LINC00648-201ENST00000553747 FBLN7Q53RD9 439 aa6.18□□□□□ -1.42
LINC00648-201ENST00000553747 ZNF574Q6ZN55 896 aaPredicted RBP6.18□□□□□ -1.42
LINC00648-201ENST00000553747 ZAR1Q86SH2 424 aa6.18□□□□□ -1.42
LINC00648-201ENST00000553747 SMG8Q8ND04 991 aaKnown RBP6.18□□□□□ -1.42
LINC00648-201ENST00000553747 METTL22Q9BUU2 404 aaPredicted RBP6.18□□□□□ -1.42
LINC00648-201ENST00000553747 CYP4F12Q9HCS2 524 aa6.18□□□□□ -1.42
LINC00648-201ENST00000553747 POLIQ9UNA4 740 aa6.18□□□□□ -1.42
LINC00648-201ENST00000553747 CES1P23141 567 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 USP5P45974 858 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 CPSF6Q16630 551 aaKnown RBP eCLIP6.17□□□□□ -1.42
LINC00648-201ENST00000553747 XKR5Q6UX68 686 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 SPOCD1Q6ZMY3 1216 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 C2CD4AQ8NCU7 369 aaPredicted RBP6.17□□□□□ -1.42
LINC00648-201ENST00000553747 AGBL5Q8NDL9 886 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 GATA6Q92908 595 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 GGNBP2Q9H3C7 697 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 EGFL7Q9UHF1 273 aa6.17□□□□□ -1.42
LINC00648-201ENST00000553747 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
LINC00648-201ENST00000553747 CARMIL2Q6F5E8 1435 aa6.16□□□□□ -1.42
LINC00648-201ENST00000553747 A6NHS1 94 aa6.16□□□□□ -1.42
LINC00648-201ENST00000553747 EHHADHQ08426 723 aa6.16□□□□□ -1.42
LINC00648-201ENST00000553747 IKBKEQ14164 716 aa6.16□□□□□ -1.42
LINC00648-201ENST00000553747 GLYCTKQ8IVS8 523 aa6.16□□□□□ -1.42
LINC00648-201ENST00000553747 PMEPA1Q969W9 287 aa6.16□□□□□ -1.42
LINC00648-201ENST00000553747 SUGCTQ9HAC7 445 aa6.16□□□□□ -1.42
LINC00648-201ENST00000553747 DBX1A6NMT0 343 aa6.15□□□□□ -1.42
LINC00648-201ENST00000553747 H3BRB1 525 aa6.15□□□□□ -1.42
LINC00648-201ENST00000553747 ICMTO60725 284 aa6.15□□□□□ -1.42
LINC00648-201ENST00000553747 SERPINB4P48594 390 aa6.15□□□□□ -1.42
LINC00648-201ENST00000553747 VN1R5Q7Z5H4 357 aa6.15□□□□□ -1.42
LINC00648-201ENST00000553747 TUT1Q9H6E5 874 aaKnown RBP6.15□□□□□ -1.42
LINC00648-201ENST00000553747 FZD6O60353 706 aa6.14□□□□□ -1.43
LINC00648-201ENST00000553747 NFICP08651 508 aa6.14□□□□□ -1.43
LINC00648-201ENST00000553747 RAB6AP20340 208 aa6.14□□□□□ -1.43
LINC00648-201ENST00000553747 PLCL1Q15111 1095 aa6.14□□□□□ -1.43
LINC00648-201ENST00000553747 ZNF792Q3KQV3 632 aa6.14□□□□□ -1.43
LINC00648-201ENST00000553747 EXOSC6Q5RKV6 272 aaKnown RBP6.14□□□□□ -1.43
LINC00648-201ENST00000553747 ZNF765Q7L2R6 523 aa6.14□□□□□ -1.43
LINC00648-201ENST00000553747 SPRED2Q7Z698 418 aa6.14□□□□□ -1.43
LINC00648-201ENST00000553747 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 PHACTR2O75167 634 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 SOX4Q06945 474 aaPredicted RBP6.13□□□□□ -1.43
LINC00648-201ENST00000553747 BNIP3Q12983 259 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 DUSP27Q5VZP5 1158 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 WFDC3Q8IUB2 231 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 CCER1Q8TC90 406 aaPredicted RBP6.13□□□□□ -1.43
LINC00648-201ENST00000553747 BCL7CQ8WUZ0 217 aaPredicted RBP6.13□□□□□ -1.43
LINC00648-201ENST00000553747 EZH1Q92800 747 aaPredicted RBP6.13□□□□□ -1.43
LINC00648-201ENST00000553747 NXPE3Q969Y0 559 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 OSMRQ99650 979 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 CCDC87Q9NVE4 849 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 BRPF3Q9ULD4 1205 aa6.13□□□□□ -1.43
LINC00648-201ENST00000553747 TNFRSF21O75509 655 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 GSTM4Q03013 218 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 TMEM102Q8N9M5 508 aaPredicted RBP6.12□□□□□ -1.43
LINC00648-201ENST00000553747 ASAP3Q8TDY4 903 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 SNX29Q8TEQ0 813 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 BSNDQ8WZ55 320 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 ZKSCAN3Q9BRR0 538 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 CHRDQ9H2X0 955 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 LGR6Q9HBX8 967 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 ACTL7BQ9Y614 415 aa6.12□□□□□ -1.43
LINC00648-201ENST00000553747 NDUFB5O43674 189 aa6.11□□□□□ -1.43
LINC00648-201ENST00000553747 FARP2O94887 1054 aaPredicted RBP6.11□□□□□ -1.43
LINC00648-201ENST00000553747 EDN3P14138 238 aa6.11□□□□□ -1.43
LINC00648-201ENST00000553747 TXNDC2Q86VQ3 553 aa6.11□□□□□ -1.43
LINC00648-201ENST00000553747 GJD3Q8N144 294 aa6.11□□□□□ -1.43
LINC00648-201ENST00000553747 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
LINC00648-201ENST00000553747 SLC5A6Q9Y289 635 aa6.11□□□□□ -1.43
LINC00648-201ENST00000553747 EREGO14944 169 aa6.1□□□□□ -1.43
LINC00648-201ENST00000553747 CTSBP07858 339 aa6.1□□□□□ -1.43
LINC00648-201ENST00000553747 ESRRAP11474 423 aaPredicted RBP6.1□□□□□ -1.43
LINC00648-201ENST00000553747 ADH5P11766 374 aa6.1□□□□□ -1.43
LINC00648-201ENST00000553747 FOXD3Q9UJU5 478 aaPredicted RBP6.1□□□□□ -1.43
LINC00648-201ENST00000553747 METTL12A8MUP2 240 aa6.09□□□□□ -1.43
LINC00648-201ENST00000553747 BIN1O00499 593 aa6.09□□□□□ -1.43
LINC00648-201ENST00000553747 DYNC1LI2O43237 492 aaPredicted RBP6.09□□□□□ -1.43
LINC00648-201ENST00000553747 DYMQ7RTS9 669 aa6.09□□□□□ -1.43
LINC00648-201ENST00000553747 FAM168AQ92567 244 aa6.09□□□□□ -1.43
LINC00648-201ENST00000553747 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
LINC00648-201ENST00000553747 SEMA6CQ9H3T2 930 aa6.09□□□□□ -1.43
LINC00648-201ENST00000553747 AMOTL2Q9Y2J4 779 aa6.09□□□□□ -1.43
LINC00648-201ENST00000553747 BRD1O95696 1058 aa6.08□□□□□ -1.44
LINC00648-201ENST00000553747 NEFLP07196 543 aa6.08□□□□□ -1.44
LINC00648-201ENST00000553747 ZNF865P0CJ78 1059 aaPredicted RBP6.08□□□□□ -1.44
LINC00648-201ENST00000553747 CD96P40200 585 aa6.08□□□□□ -1.44
LINC00648-201ENST00000553747 ARHGAP4P98171 946 aa6.08□□□□□ -1.44
LINC00648-201ENST00000553747 PDE3BQ13370 1112 aa6.08□□□□□ -1.44
LINC00648-201ENST00000553747 MAP7Q14244 749 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms