RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 IFNL1Q8IU54 200 aa19.88■□□□□ 0.77
ACTN1-209ENST00000553659 C9orf78Q9NZ63 289 aaPredicted RBP19.88■□□□□ 0.77
ACTN1-209ENST00000553659 NOB1Q9ULX3 412 aaKnown RBP19.88■□□□□ 0.77
ACTN1-209ENST00000553659 FAM205AQ6ZU69 1335 aa19.87■□□□□ 0.77
ACTN1-209ENST00000553659 ALDH1L1O75891 902 aa19.87■□□□□ 0.77
ACTN1-209ENST00000553659 TRIM27P14373 513 aa19.87■□□□□ 0.77
ACTN1-209ENST00000553659 WNK4Q96J92 1243 aa19.87■□□□□ 0.77
ACTN1-209ENST00000553659 CLMNQ96JQ2 1002 aa19.87■□□□□ 0.77
ACTN1-209ENST00000553659 VEZTQ9HBM0 779 aa19.87■□□□□ 0.77
ACTN1-209ENST00000553659 JAG2Q9Y219 1238 aa19.87■□□□□ 0.77
ACTN1-209ENST00000553659 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
ACTN1-209ENST00000553659 UBE4AQ14139 1066 aa19.86■□□□□ 0.77
ACTN1-209ENST00000553659 NBPF12Q5TAG4 269 aaPredicted RBP19.86■□□□□ 0.77
ACTN1-209ENST00000553659 MRPL50Q8N5N7 158 aaKnown RBP19.86■□□□□ 0.77
ACTN1-209ENST00000553659 TDRD7Q8NHU6 1098 aaKnown RBP19.86■□□□□ 0.77
ACTN1-209ENST00000553659 API5Q9BZZ5 524 aaKnown RBP19.86■□□□□ 0.77
ACTN1-209ENST00000553659 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
ACTN1-209ENST00000553659 AOX1Q06278 1338 aa19.85■□□□□ 0.77
ACTN1-209ENST00000553659 USP2O75604 605 aaPredicted RBP19.85■□□□□ 0.77
ACTN1-209ENST00000553659 IREB2P48200 963 aaKnown RBP19.85■□□□□ 0.77
ACTN1-209ENST00000553659 SRCIN1Q9C0H9 1055 aa19.85■□□□□ 0.77
ACTN1-209ENST00000553659 RWDD1Q9H446 243 aaPredicted RBP19.85■□□□□ 0.77
ACTN1-209ENST00000553659 RLBP1P12271 317 aa19.84■□□□□ 0.77
ACTN1-209ENST00000553659 HIBADHP31937 336 aaKnown RBP19.84■□□□□ 0.77
ACTN1-209ENST00000553659 RASA3Q14644 834 aa19.84■□□□□ 0.77
ACTN1-209ENST00000553659 MFSD14BQ5SR56 506 aa19.84■□□□□ 0.77
ACTN1-209ENST00000553659 SLC4A10Q6U841 1118 aa19.84■□□□□ 0.77
ACTN1-209ENST00000553659 ARAP2Q8WZ64 1704 aa19.83■□□□□ 0.77
ACTN1-209ENST00000553659 IGF2BP3O00425 579 aaKnown RBP eCLIP19.83■□□□□ 0.77
ACTN1-209ENST00000553659 GYG1P46976 350 aa19.83■□□□□ 0.77
ACTN1-209ENST00000553659 TNFAIP1Q13829 316 aa19.83■□□□□ 0.77
ACTN1-209ENST00000553659 ANKRD13AQ8IZ07 590 aa19.83■□□□□ 0.77
ACTN1-209ENST00000553659 FAM84BQ96KN1 310 aaPredicted RBP19.83■□□□□ 0.77
ACTN1-209ENST00000553659 SERPINA10Q9UK55 444 aa19.83■□□□□ 0.77
ACTN1-209ENST00000553659 TTF2Q9UNY4 1162 aaKnown RBP19.83■□□□□ 0.77
ACTN1-209ENST00000553659 OTOFQ9HC10 1997 aa19.83■□□□□ 0.76
ACTN1-209ENST00000553659 SPDYE2Q495Y8 402 aa19.82■□□□□ 0.76
ACTN1-209ENST00000553659 PRPF38BQ5VTL8 546 aaKnown RBP19.82■□□□□ 0.76
ACTN1-209ENST00000553659 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
ACTN1-209ENST00000553659 KAZALD1Q96I82 304 aa19.82■□□□□ 0.76
ACTN1-209ENST00000553659 SUCLG2Q96I99 432 aa19.82■□□□□ 0.76
ACTN1-209ENST00000553659 ZNF70Q9UC06 446 aaPredicted RBP19.82■□□□□ 0.76
ACTN1-209ENST00000553659 ITPRIPQ8IWB1 547 aa19.81■□□□□ 0.76
ACTN1-209ENST00000553659 PUS3Q9BZE2 481 aaKnown RBP19.81■□□□□ 0.76
ACTN1-209ENST00000553659 TDRD3Q9H7E2 651 aaKnown RBP19.81■□□□□ 0.76
ACTN1-209ENST00000553659 RIPOR2Q9Y4F9 1068 aa19.81■□□□□ 0.76
ACTN1-209ENST00000553659 TRIM17Q9Y577 477 aa19.81■□□□□ 0.76
ACTN1-209ENST00000553659 NBPF7P0C2Y1 421 aaPredicted RBP19.8■□□□□ 0.76
ACTN1-209ENST00000553659 GJA5P36382 358 aa19.8■□□□□ 0.76
ACTN1-209ENST00000553659 UTYO14607 1347 aa19.79■□□□□ 0.76
ACTN1-209ENST00000553659 PTPRCP08575 1304 aa19.79■□□□□ 0.76
ACTN1-209ENST00000553659 MROH5Q6ZUA9 1318 aa19.79■□□□□ 0.76
ACTN1-209ENST00000553659 TESPA1A2RU30 521 aaPredicted RBP19.79■□□□□ 0.76
ACTN1-209ENST00000553659 OTOP1Q7RTM1 612 aa19.79■□□□□ 0.76
ACTN1-209ENST00000553659 ERO1AQ96HE7 468 aa19.79■□□□□ 0.76
ACTN1-209ENST00000553659 PCDH10Q9P2E7 1040 aa19.79■□□□□ 0.76
ACTN1-209ENST00000553659 CRKP46108 304 aa19.78■□□□□ 0.76
ACTN1-209ENST00000553659 CRHR2Q13324 411 aa19.78■□□□□ 0.76
ACTN1-209ENST00000553659 FBXO33Q7Z6M2 555 aa19.78■□□□□ 0.76
ACTN1-209ENST00000553659 TMEM57Q8N5G2 664 aa19.78■□□□□ 0.76
ACTN1-209ENST00000553659 TEPSINQ96N21 525 aa19.78■□□□□ 0.76
ACTN1-209ENST00000553659 PTPN18Q99952 460 aa19.78■□□□□ 0.76
ACTN1-209ENST00000553659 HDAC1Q13547 482 aaPredicted RBP19.77■□□□□ 0.76
ACTN1-209ENST00000553659 RABL6Q3YEC7 729 aaPredicted RBP19.77■□□□□ 0.76
ACTN1-209ENST00000553659 INTS3Q68E01 1043 aaKnown RBP19.77■□□□□ 0.76
ACTN1-209ENST00000553659 VPS37DQ86XT2 251 aa19.77■□□□□ 0.76
ACTN1-209ENST00000553659 OPTNQ96CV9 577 aa19.77■□□□□ 0.76
ACTN1-209ENST00000553659 ELP3Q9H9T3 547 aa19.77■□□□□ 0.76
ACTN1-209ENST00000553659 TCP10L2B9ZVM9 353 aa19.76■□□□□ 0.75
ACTN1-209ENST00000553659 TNNI2P48788 182 aa19.76■□□□□ 0.75
ACTN1-209ENST00000553659 BICC1Q9H694 974 aaKnown RBP19.76■□□□□ 0.75
ACTN1-209ENST00000553659 TNNQ9UQP3 1299 aa19.76■□□□□ 0.75
ACTN1-209ENST00000553659 HDLBPQ00341 1268 aaKnown RBP19.75■□□□□ 0.75
ACTN1-209ENST00000553659 CAVIN4Q5BKX8 364 aa19.75■□□□□ 0.75
ACTN1-209ENST00000553659 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.75■□□□□ 0.75
ACTN1-209ENST00000553659 CDAN1Q8IWY9 1227 aa19.75■□□□□ 0.75
ACTN1-209ENST00000553659 CD99L2Q8TCZ2 262 aa19.75■□□□□ 0.75
ACTN1-209ENST00000553659 TBC1D22AQ8WUA7 517 aa19.75■□□□□ 0.75
ACTN1-209ENST00000553659 MS4A4AQ96JQ5 239 aa19.75■□□□□ 0.75
ACTN1-209ENST00000553659 PTPN22Q9Y2R2 807 aa19.75■□□□□ 0.75
ACTN1-209ENST00000553659 RBBP6Q7Z6E9 1792 aaKnown RBP19.75■□□□□ 0.75
ACTN1-209ENST00000553659 IGHDP01880 384 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 MAP3K9P80192 1104 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 SP3Q02447 781 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 GRIK5Q16478 980 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 LRRC24Q50LG9 513 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 METTL24Q5JXM2 366 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 ANKRD44Q8N8A2 993 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 TMEM39BQ9GZU3 492 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 ZBTB40Q9NUA8 1239 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 IQSEC3Q9UPP2 1182 aaPredicted RBP19.74■□□□□ 0.75
ACTN1-209ENST00000553659 PCDHB15Q9Y5E8 787 aa19.74■□□□□ 0.75
ACTN1-209ENST00000553659 FRAT2O75474 233 aaPredicted RBP19.73■□□□□ 0.75
ACTN1-209ENST00000553659 PDE8BO95263 885 aa19.73■□□□□ 0.75
ACTN1-209ENST00000553659 CHAF1AQ13111 956 aaPredicted RBP19.73■□□□□ 0.75
ACTN1-209ENST00000553659 VGLL2Q8N8G2 317 aa19.73■□□□□ 0.75
ACTN1-209ENST00000553659 MRIQ9BWK5 157 aa19.73■□□□□ 0.75
ACTN1-209ENST00000553659 EFCC1Q9HA90 598 aa19.73■□□□□ 0.75
ACTN1-209ENST00000553659 MYH13Q9UKX3 1938 aa19.72■□□□□ 0.75
ACTN1-209ENST00000553659 GTF2A2P52657 109 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms