RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SLF2Q8IX21 1173 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 ZC3H15Q8WU90 426 aaKnown RBP16.87■□□□□ 0.29
TUBB3-202ENST00000553656 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 DNAJC2Q99543 621 aaKnown RBP16.87■□□□□ 0.29
TUBB3-202ENST00000553656 RAI14Q9P0K7 980 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 SERPINA10Q9UK55 444 aa16.87■□□□□ 0.29
TUBB3-202ENST00000553656 ERC2O15083 957 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 EGFRP00533 1210 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 POTEJP0CG39 1038 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 MX1P20591 662 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 CRKP46108 304 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 HDLBPQ00341 1268 aaKnown RBP16.86■□□□□ 0.29
TUBB3-202ENST00000553656 NUCB1Q02818 461 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 TTF1Q15361 905 aaPredicted RBP16.86■□□□□ 0.29
TUBB3-202ENST00000553656 GRIK5Q16478 980 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 BOLA2Q9H3K6 86 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 TTC41PQ6P2S7 1318 aa16.86■□□□□ 0.29
TUBB3-202ENST00000553656 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
TUBB3-202ENST00000553656 GSTO1P78417 241 aa16.85■□□□□ 0.29
TUBB3-202ENST00000553656 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
TUBB3-202ENST00000553656 MTMR14Q8NCE2 650 aa16.85■□□□□ 0.29
TUBB3-202ENST00000553656 DCPSQ96C86 337 aaKnown RBP16.85■□□□□ 0.29
TUBB3-202ENST00000553656 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
TUBB3-202ENST00000553656 WNT10BO00744 389 aa16.84■□□□□ 0.29
TUBB3-202ENST00000553656 IDH1O75874 414 aaKnown RBP16.84■□□□□ 0.29
TUBB3-202ENST00000553656 CYP2E1P05181 493 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-202ENST00000553656 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
TUBB3-202ENST00000553656 FSTL1Q12841 308 aa16.84■□□□□ 0.29
TUBB3-202ENST00000553656 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
TUBB3-202ENST00000553656 GGA3Q9NZ52 723 aa16.84■□□□□ 0.29
TUBB3-202ENST00000553656 AKAP11Q9UKA4 1901 aa16.84■□□□□ 0.29
TUBB3-202ENST00000553656 GOLIM4O00461 696 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 IGSF3O75054 1194 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 GLRX3O76003 335 aaKnown RBP16.83■□□□□ 0.28
TUBB3-202ENST00000553656 MAP3K12Q12852 859 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 NBPF9Q3BBW0 867 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 TSHZ3Q63HK5 1081 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 MAP1SQ66K74 1059 aaPredicted RBP16.83■□□□□ 0.28
TUBB3-202ENST00000553656 HHIPL2Q6UWX4 724 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.28
TUBB3-202ENST00000553656 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 OTUD7AQ8TE49 926 aaPredicted RBP16.83■□□□□ 0.28
TUBB3-202ENST00000553656 ZDHHC15Q96MV8 337 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 HAUS7Q99871 368 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 NDUFB9Q9Y6M9 179 aa16.83■□□□□ 0.28
TUBB3-202ENST00000553656 LDHCP07864 332 aa16.82■□□□□ 0.28
TUBB3-202ENST00000553656 MECOMQ03112 1051 aa16.82■□□□□ 0.28
TUBB3-202ENST00000553656 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
TUBB3-202ENST00000553656 ANGEL2Q5VTE6 544 aaKnown RBP16.82■□□□□ 0.28
TUBB3-202ENST00000553656 NAA16Q6N069 864 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-202ENST00000553656 SULF1Q8IWU6 871 aa16.82■□□□□ 0.28
TUBB3-202ENST00000553656 CNTROBQ8N137 903 aa16.82■□□□□ 0.28
TUBB3-202ENST00000553656 PRMT6Q96LA8 375 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-202ENST00000553656 NOL10Q9BSC4 688 aaKnown RBP16.82■□□□□ 0.28
TUBB3-202ENST00000553656 PIH1D3Q9NQM4 214 aaKnown RBP16.82■□□□□ 0.28
TUBB3-202ENST00000553656 PAG1Q9NWQ8 432 aa16.82■□□□□ 0.28
TUBB3-202ENST00000553656 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
TUBB3-202ENST00000553656 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
TUBB3-202ENST00000553656 CDC37L1Q7L3B6 337 aa16.81■□□□□ 0.28
TUBB3-202ENST00000553656 APOBEC3FQ8IUX4 373 aaKnown RBP16.81■□□□□ 0.28
TUBB3-202ENST00000553656 ZBED3Q96IU2 234 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-202ENST00000553656 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.81■□□□□ 0.28
TUBB3-202ENST00000553656 ANTXR1Q9H6X2 564 aa16.81■□□□□ 0.28
TUBB3-202ENST00000553656 PGAP2Q9UHJ9 254 aa16.81■□□□□ 0.28
TUBB3-202ENST00000553656 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
TUBB3-202ENST00000553656 MROH7-TTC4A0A0A0MT08 1334 aa16.8■□□□□ 0.28
TUBB3-202ENST00000553656 ASTN2O75129 1339 aaPredicted RBP16.8■□□□□ 0.28
TUBB3-202ENST00000553656 CLRN2A0PK11 232 aa16.8■□□□□ 0.28
TUBB3-202ENST00000553656 PDE1AP54750 535 aa16.8■□□□□ 0.28
TUBB3-202ENST00000553656 KRT26Q7Z3Y9 468 aa16.8■□□□□ 0.28
TUBB3-202ENST00000553656 NSUN4Q96CB9 384 aaKnown RBP16.8■□□□□ 0.28
TUBB3-202ENST00000553656 VEZTQ9HBM0 779 aa16.8■□□□□ 0.28
TUBB3-202ENST00000553656 DAGLAQ9Y4D2 1042 aa16.8■□□□□ 0.28
TUBB3-202ENST00000553656 PCDHAC2Q9Y5I4 1007 aa16.8■□□□□ 0.28
TUBB3-202ENST00000553656 GAKO14976 1311 aa16.79■□□□□ 0.28
TUBB3-202ENST00000553656 AOX1Q06278 1338 aa16.79■□□□□ 0.28
TUBB3-202ENST00000553656 SALL3Q9BXA9 1300 aa16.79■□□□□ 0.28
TUBB3-202ENST00000553656 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
TUBB3-202ENST00000553656 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
TUBB3-202ENST00000553656 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
TUBB3-202ENST00000553656 EDC3Q96F86 508 aaKnown RBP16.79■□□□□ 0.28
TUBB3-202ENST00000553656 TDRD3Q9H7E2 651 aaKnown RBP16.79■□□□□ 0.28
TUBB3-202ENST00000553656 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
TUBB3-202ENST00000553656 STAP2Q9UGK3 403 aa16.79■□□□□ 0.28
TUBB3-202ENST00000553656 TNFAIP1Q13829 316 aa16.78■□□□□ 0.28
TUBB3-202ENST00000553656 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
TUBB3-202ENST00000553656 APOBEC3HQ6NTF7 200 aaKnown RBP16.78■□□□□ 0.28
TUBB3-202ENST00000553656 USP48Q86UV5 1035 aa16.78■□□□□ 0.28
TUBB3-202ENST00000553656 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-202ENST00000553656 GLIS2Q9BZE0 524 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-202ENST00000553656 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-202ENST00000553656 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
TUBB3-202ENST00000553656 ECM29Q5VYK3 1845 aa16.77■□□□□ 0.28
TUBB3-202ENST00000553656 BAG3O95817 575 aa16.77■□□□□ 0.28
TUBB3-202ENST00000553656 CYP7A1P22680 504 aa16.77■□□□□ 0.28
TUBB3-202ENST00000553656 BTDP43251 543 aa16.77■□□□□ 0.28
TUBB3-202ENST00000553656 TNNI2P48788 182 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms