RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 WDR66Q8TBY9 1149 aa16.1■□□□□ 0.17
ACTN1-207ENST00000553290 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
ACTN1-207ENST00000553290 MAST3O60307 1309 aa16.1■□□□□ 0.17
ACTN1-207ENST00000553290 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
ACTN1-207ENST00000553290 SUPT20HL1Q3ZLR7 823 aa16.09■□□□□ 0.17
ACTN1-207ENST00000553290 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
ACTN1-207ENST00000553290 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
ACTN1-207ENST00000553290 MRIQ9BWK5 157 aa16.09■□□□□ 0.17
ACTN1-207ENST00000553290 ZNF70Q9UC06 446 aaPredicted RBP16.09■□□□□ 0.17
ACTN1-207ENST00000553290 PPP1R12BO60237 982 aaPredicted RBP16.08■□□□□ 0.16
ACTN1-207ENST00000553290 FTSJ3Q8IY81 847 aaKnown RBP16.08■□□□□ 0.16
ACTN1-207ENST00000553290 TEKT1Q969V4 418 aa16.08■□□□□ 0.16
ACTN1-207ENST00000553290 TDRD3Q9H7E2 651 aaKnown RBP16.08■□□□□ 0.16
ACTN1-207ENST00000553290 SAGE1Q9NXZ1 904 aa16.08■□□□□ 0.16
ACTN1-207ENST00000553290 TSKSQ9UJT2 592 aa16.08■□□□□ 0.16
ACTN1-207ENST00000553290 AOX1Q06278 1338 aa16.08■□□□□ 0.16
ACTN1-207ENST00000553290 PRKG1Q13976 671 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 RASA3Q14644 834 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 GRIK5Q16478 980 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 MAP3K11Q16584 847 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 LDLRAD1Q5T700 205 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 CSRNP1Q96S65 589 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 ANGEL1Q9UNK9 670 aaKnown RBP16.07■□□□□ 0.16
ACTN1-207ENST00000553290 AKAP2Q9Y2D5 859 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
ACTN1-207ENST00000553290 SEMA3EO15041 775 aa16.06■□□□□ 0.16
ACTN1-207ENST00000553290 ZBTB22O15209 634 aa16.06■□□□□ 0.16
ACTN1-207ENST00000553290 TNNI2P48788 182 aa16.06■□□□□ 0.16
ACTN1-207ENST00000553290 HHIPL2Q6UWX4 724 aa16.06■□□□□ 0.16
ACTN1-207ENST00000553290 DENND2AQ9ULE3 1009 aa16.06■□□□□ 0.16
ACTN1-207ENST00000553290 UNCXA6NJT0 531 aa16.05■□□□□ 0.16
ACTN1-207ENST00000553290 NBPF12Q5TAG4 269 aaPredicted RBP16.05■□□□□ 0.16
ACTN1-207ENST00000553290 ZDHHC15Q96MV8 337 aa16.05■□□□□ 0.16
ACTN1-207ENST00000553290 RNF186Q9NXI6 227 aa16.05■□□□□ 0.16
ACTN1-207ENST00000553290 PHKA1P46020 1223 aa16.04■□□□□ 0.16
ACTN1-207ENST00000553290 IREB2P48200 963 aaKnown RBP16.04■□□□□ 0.16
ACTN1-207ENST00000553290 TFCP2Q12800 502 aa16.04■□□□□ 0.16
ACTN1-207ENST00000553290 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
ACTN1-207ENST00000553290 SSC5DA1L4H1 1573 aa16.04■□□□□ 0.16
ACTN1-207ENST00000553290 SALL1Q9NSC2 1324 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 PNMA6EA0A0J9YXQ4 647 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 A0A1B0GUL7 405 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 TCP10L2B9ZVM9 353 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 TRPA1O75762 1119 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 ADORA1P30542 326 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 TIMM10P62072 90 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 G3BP1Q13283 466 aaKnown RBP eCLIP16.03■□□□□ 0.167e-8■□□□□ 10.4
ACTN1-207ENST00000553290 CCDC102BQ68D86 513 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
ACTN1-207ENST00000553290 SLC10A4Q96EP9 437 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
ACTN1-207ENST00000553290 CASP8AP2Q9UKL3 1982 aa16.02■□□□□ 0.16
ACTN1-207ENST00000553290 PDS5AQ29RF7 1337 aaKnown RBP16.02■□□□□ 0.16
ACTN1-207ENST00000553290 USP2O75604 605 aaPredicted RBP16.02■□□□□ 0.16
ACTN1-207ENST00000553290 CAPN15O75808 1086 aa16.02■□□□□ 0.16
ACTN1-207ENST00000553290 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.16
ACTN1-207ENST00000553290 TM4SF4P48230 202 aa16.02■□□□□ 0.16
ACTN1-207ENST00000553290 SREBF2Q12772 1141 aa16.02■□□□□ 0.16
ACTN1-207ENST00000553290 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.16
ACTN1-207ENST00000553290 FKBP1CQ5VVH2 108 aa16.02■□□□□ 0.16
ACTN1-207ENST00000553290 SPRYD7Q5W111 196 aa16.02■□□□□ 0.16
ACTN1-207ENST00000553290 APOBEC3HQ6NTF7 200 aaKnown RBP16.02■□□□□ 0.16
ACTN1-207ENST00000553290 XAGE2Q96GT9 111 aa16.02■□□□□ 0.16
ACTN1-207ENST00000553290 ZBTB7BO15156 539 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-207ENST00000553290 MS4A1P11836 297 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 RLBP1P12271 317 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 PRDX5P30044 214 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 ATP8B2P98198 1209 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 POLA2Q14181 598 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 FAM83AQ86UY5 434 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 ANKRD13AQ8IZ07 590 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 TEPSINQ96N21 525 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 TMEM39BQ9GZU3 492 aa16.01■□□□□ 0.15
ACTN1-207ENST00000553290 ZBTB48P10074 688 aaPredicted RBP16■□□□□ 0.15
ACTN1-207ENST00000553290 MKRN3Q13064 507 aaKnown RBP16■□□□□ 0.15
ACTN1-207ENST00000553290 CACNB3P54284 484 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 INHBEP58166 350 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 GORABQ5T7V8 394 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 SPTY2D1Q68D10 685 aaPredicted RBP15.99■□□□□ 0.15
ACTN1-207ENST00000553290 HOOK2Q96ED9 719 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 WNK4Q96J92 1243 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 CLMNQ96JQ2 1002 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 DAGLAQ9Y4D2 1042 aa15.99■□□□□ 0.15
ACTN1-207ENST00000553290 MANSC4A6NHS7 340 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-207ENST00000553290 OS9Q13438 667 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-207ENST00000553290 DIXDC1Q155Q3 683 aa15.98■□□□□ 0.15
ACTN1-207ENST00000553290 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
ACTN1-207ENST00000553290 SLF2Q8IX21 1173 aa15.98■□□□□ 0.15
ACTN1-207ENST00000553290 C1orf115Q9H7X2 142 aa15.98■□□□□ 0.15
ACTN1-207ENST00000553290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-207ENST00000553290 CDC42EP5Q6NZY7 148 aa15.97■□□□□ 0.15
ACTN1-207ENST00000553290 PANK1Q8TE04 598 aa15.97■□□□□ 0.15
ACTN1-207ENST00000553290 ABHD8Q96I13 439 aa15.97■□□□□ 0.15
ACTN1-207ENST00000553290 GPR108Q9NPR9 543 aa15.97■□□□□ 0.15
ACTN1-207ENST00000553290 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-207ENST00000553290 ABCF2Q9UG63 623 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms