RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 IL15P40933 162 aaPredicted RBP19.78■□□□□ 0.76
CDK4-215ENST00000553237 ATP2B3Q16720 1220 aa19.78■□□□□ 0.76
CDK4-215ENST00000553237 SPDYE2Q495Y8 402 aa19.78■□□□□ 0.76
CDK4-215ENST00000553237 NBPF12Q5TAG4 269 aaPredicted RBP19.78■□□□□ 0.76
CDK4-215ENST00000553237 COPRSQ9NQ92 184 aa19.78■□□□□ 0.76
CDK4-215ENST00000553237 SRGAP3O43295 1099 aa19.77■□□□□ 0.76
CDK4-215ENST00000553237 SUPT20HL1Q3ZLR7 823 aa19.77■□□□□ 0.76
CDK4-215ENST00000553237 LDLRAD1Q5T700 205 aa19.77■□□□□ 0.76
CDK4-215ENST00000553237 COL1A1P02452 1464 aaPredicted RBP19.77■□□□□ 0.76
CDK4-215ENST00000553237 TCP10L2B9ZVM9 353 aa19.76■□□□□ 0.75
CDK4-215ENST00000553237 PPP1R12BO60237 982 aaPredicted RBP19.76■□□□□ 0.75
CDK4-215ENST00000553237 ZKSCAN2Q63HK3 967 aa19.76■□□□□ 0.75
CDK4-215ENST00000553237 TMEM57Q8N5G2 664 aa19.76■□□□□ 0.75
CDK4-215ENST00000553237 SAGE1Q9NXZ1 904 aa19.76■□□□□ 0.75
CDK4-215ENST00000553237 GNAI2P04899 355 aa19.75■□□□□ 0.75
CDK4-215ENST00000553237 REM2Q8IYK8 340 aaPredicted RBP19.75■□□□□ 0.75
CDK4-215ENST00000553237 TEKT1Q969V4 418 aa19.75■□□□□ 0.75
CDK4-215ENST00000553237 SSC5DA1L4H1 1573 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 CASP8AP2Q9UKL3 1982 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 ADORA1P30542 326 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 CACNB3P54284 484 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 HDLBPQ00341 1268 aaKnown RBP19.74■□□□□ 0.75
CDK4-215ENST00000553237 TNFAIP1Q13829 316 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 CDAN1Q8IWY9 1227 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 WDR66Q8TBY9 1149 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 SLC10A4Q96EP9 437 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 ABHD8Q96I13 439 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 CLMNQ96JQ2 1002 aa19.74■□□□□ 0.75
CDK4-215ENST00000553237 PHKA1P46020 1223 aa19.73■□□□□ 0.75
CDK4-215ENST00000553237 TIMM10P62072 90 aa19.73■□□□□ 0.75
CDK4-215ENST00000553237 MTX1Q13505 466 aa19.73■□□□□ 0.75
CDK4-215ENST00000553237 MAP3K11Q16584 847 aa19.73■□□□□ 0.75
CDK4-215ENST00000553237 GNL3LQ9NVN8 582 aaKnown RBP19.73■□□□□ 0.75
CDK4-215ENST00000553237 SUGT1Q9Y2Z0 365 aa19.73■□□□□ 0.75
CDK4-215ENST00000553237 ECM29Q5VYK3 1845 aa19.73■□□□□ 0.75
CDK4-215ENST00000553237 USP2O75604 605 aaPredicted RBP19.72■□□□□ 0.75
CDK4-215ENST00000553237 TFCP2Q12800 502 aa19.72■□□□□ 0.75
CDK4-215ENST00000553237 SPRYD7Q5W111 196 aa19.72■□□□□ 0.75
CDK4-215ENST00000553237 ARAP2Q8WZ64 1704 aa19.72■□□□□ 0.75
CDK4-215ENST00000553237 ZDHHC15Q96MV8 337 aa19.72■□□□□ 0.75
CDK4-215ENST00000553237 MRIQ9BWK5 157 aa19.72■□□□□ 0.75
CDK4-215ENST00000553237 TMEM39BQ9GZU3 492 aa19.72■□□□□ 0.75
CDK4-215ENST00000553237 PNMA6EA0A0J9YXQ4 647 aa19.71■□□□□ 0.75
CDK4-215ENST00000553237 IREB2P48200 963 aaKnown RBP19.71■□□□□ 0.75
CDK4-215ENST00000553237 TNNI2P48788 182 aa19.71■□□□□ 0.75
CDK4-215ENST00000553237 APOBEC3HQ6NTF7 200 aaKnown RBP19.71■□□□□ 0.75
CDK4-215ENST00000553237 TEPSINQ96N21 525 aa19.71■□□□□ 0.75
CDK4-215ENST00000553237 MAST3O60307 1309 aa19.71■□□□□ 0.75
CDK4-215ENST00000553237 ZBED9Q6R2W3 1325 aa19.71■□□□□ 0.75
CDK4-215ENST00000553237 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
CDK4-215ENST00000553237 TM4SF4P48230 202 aa19.7■□□□□ 0.74
CDK4-215ENST00000553237 DGKZQ13574 1117 aa19.7■□□□□ 0.74
CDK4-215ENST00000553237 CCDC102BQ68D86 513 aa19.7■□□□□ 0.74
CDK4-215ENST00000553237 MCOLN1Q9GZU1 580 aa19.7■□□□□ 0.74
CDK4-215ENST00000553237 DENND2AQ9ULE3 1009 aa19.7■□□□□ 0.74
CDK4-215ENST00000553237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.7■□□□□ 0.74
CDK4-215ENST00000553237 AKAP11Q9UKA4 1901 aa19.7■□□□□ 0.74
CDK4-215ENST00000553237 A0A1B0GUL7 405 aa19.69■□□□□ 0.74
CDK4-215ENST00000553237 PRDX5P30044 214 aa19.69■□□□□ 0.74
CDK4-215ENST00000553237 DIXDC1Q155Q3 683 aa19.69■□□□□ 0.74
CDK4-215ENST00000553237 HHIPL2Q6UWX4 724 aa19.69■□□□□ 0.74
CDK4-215ENST00000553237 FTSJ3Q8IY81 847 aaKnown RBP19.69■□□□□ 0.74
CDK4-215ENST00000553237 WNK4Q96J92 1243 aa19.69■□□□□ 0.74
CDK4-215ENST00000553237 TMOD2Q9NZR1 351 aa19.69■□□□□ 0.74
CDK4-215ENST00000553237 LDHBP07195 334 aaKnown RBP19.68■□□□□ 0.74
CDK4-215ENST00000553237 SREBF2Q12772 1141 aa19.68■□□□□ 0.74
CDK4-215ENST00000553237 XAGE2Q96GT9 111 aa19.68■□□□□ 0.74
CDK4-215ENST00000553237 NEUROD6Q96NK8 337 aa19.68■□□□□ 0.74
CDK4-215ENST00000553237 AKAP2Q9Y2D5 859 aa19.68■□□□□ 0.74
CDK4-215ENST00000553237 SEMA3EO15041 775 aa19.67■□□□□ 0.74
CDK4-215ENST00000553237 RLBP1P12271 317 aa19.67■□□□□ 0.74
CDK4-215ENST00000553237 G3BP1Q13283 466 aaKnown RBP eCLIP19.67■□□□□ 0.744e-8■□□□□ 10.3
CDK4-215ENST00000553237 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
CDK4-215ENST00000553237 ANKRD13AQ8IZ07 590 aa19.67■□□□□ 0.74
CDK4-215ENST00000553237 C1orf115Q9H7X2 142 aa19.67■□□□□ 0.74
CDK4-215ENST00000553237 UNCXA6NJT0 531 aa19.66■□□□□ 0.74
CDK4-215ENST00000553237 CCDC85CA6NKD9 419 aa19.66■□□□□ 0.74
CDK4-215ENST00000553237 RASGRF1Q13972 1273 aa19.66■□□□□ 0.74
CDK4-215ENST00000553237 ELP3Q9H9T3 547 aa19.66■□□□□ 0.74
CDK4-215ENST00000553237 DAGLAQ9Y4D2 1042 aa19.66■□□□□ 0.74
CDK4-215ENST00000553237 MANSC4A6NHS7 340 aaPredicted RBP19.65■□□□□ 0.74
CDK4-215ENST00000553237 GJA5P36382 358 aa19.65■□□□□ 0.74
CDK4-215ENST00000553237 SALL1Q9NSC2 1324 aa19.65■□□□□ 0.74
CDK4-215ENST00000553237 MYH13Q9UKX3 1938 aa19.64■□□□□ 0.74
CDK4-215ENST00000553237 ZBTB48P10074 688 aaPredicted RBP19.64■□□□□ 0.73
CDK4-215ENST00000553237 ATP8B2P98198 1209 aa19.64■□□□□ 0.73
CDK4-215ENST00000553237 MVPQ14764 893 aaKnown RBP19.64■□□□□ 0.73
CDK4-215ENST00000553237 GORABQ5T7V8 394 aa19.64■□□□□ 0.73
CDK4-215ENST00000553237 FKBP1CQ5VVH2 108 aa19.64■□□□□ 0.73
CDK4-215ENST00000553237 CDC42EP5Q6NZY7 148 aa19.64■□□□□ 0.73
CDK4-215ENST00000553237 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.64■□□□□ 0.73
CDK4-215ENST00000553237 FAM83AQ86UY5 434 aa19.64■□□□□ 0.73
CDK4-215ENST00000553237 R3HDMLQ9H3Y0 253 aa19.64■□□□□ 0.73
CDK4-215ENST00000553237 ABCF2Q9UG63 623 aa19.64■□□□□ 0.73
CDK4-215ENST00000553237 ZBTB7BO15156 539 aaPredicted RBP19.63■□□□□ 0.73
CDK4-215ENST00000553237 INHBEP58166 350 aa19.63■□□□□ 0.73
CDK4-215ENST00000553237 MAP3K9P80192 1104 aa19.63■□□□□ 0.73
CDK4-215ENST00000553237 TCP10Q12799 353 aa19.63■□□□□ 0.73
CDK4-215ENST00000553237 POLA2Q14181 598 aa19.63■□□□□ 0.73
CDK4-215ENST00000553237 ZGPATQ8N5A5 531 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms