RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 VPS37DQ86XT2 251 aa10.99□□□□□ -0.65
TMEM116-217ENST00000552801 HELBQ8NG08 1087 aaPredicted RBP10.99□□□□□ -0.65
TMEM116-217ENST00000552801 PPP2R3BQ9Y5P8 575 aa10.99□□□□□ -0.65
TMEM116-217ENST00000552801 COL1A1P02452 1464 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-217ENST00000552801 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 FKTNO75072 461 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 FRAT2O75474 233 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-217ENST00000552801 CSF1RP07333 972 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 KLRK1P26718 216 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 IREB2P48200 963 aaKnown RBP10.98□□□□□ -0.65
TMEM116-217ENST00000552801 INHBEP58166 350 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 PTPN12Q05209 780 aaKnown RBP10.98□□□□□ -0.65
TMEM116-217ENST00000552801 TNFAIP1Q13829 316 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 LMBR1LQ6UX01 489 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 ZNF296Q8WUU4 475 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-217ENST00000552801 DEFB129Q9H1M3 183 aa10.98□□□□□ -0.65
TMEM116-217ENST00000552801 CLRN2A0PK11 232 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 MANSC4A6NHS7 340 aaPredicted RBP10.97□□□□□ -0.65
TMEM116-217ENST00000552801 F6X3S4 739 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 GPR25O00155 361 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 GRM8O00222 908 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 VAMP4O75379 141 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 TM4SF4P48230 202 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 CFAP100Q494V2 611 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 CCDC184Q52MB2 194 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 LHX8Q68G74 356 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
TMEM116-217ENST00000552801 ECM29Q5VYK3 1845 aa10.96□□□□□ -0.65
TMEM116-217ENST00000552801 WDHD1O75717 1129 aaPredicted RBP10.96□□□□□ -0.65
TMEM116-217ENST00000552801 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
TMEM116-217ENST00000552801 SRCIN1Q9C0H9 1055 aa10.96□□□□□ -0.65
TMEM116-217ENST00000552801 JAG2Q9Y219 1238 aa10.96□□□□□ -0.65
TMEM116-217ENST00000552801 ALDH1L1O75891 902 aa10.95□□□□□ -0.66
TMEM116-217ENST00000552801 TNNI2P48788 182 aa10.95□□□□□ -0.66
TMEM116-217ENST00000552801 CASP7P55210 303 aa10.95□□□□□ -0.66
TMEM116-217ENST00000552801 FKBP1AP62942 108 aaKnown RBP10.95□□□□□ -0.66
TMEM116-217ENST00000552801 SPRYD7Q5W111 196 aa10.95□□□□□ -0.66
TMEM116-217ENST00000552801 FBXO46Q6PJ61 603 aaPredicted RBP10.95□□□□□ -0.66
TMEM116-217ENST00000552801 C15orf52Q6ZUT6 534 aaKnown RBP10.95□□□□□ -0.66
TMEM116-217ENST00000552801 SNAP23O00161 211 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 ZBTB48P10074 688 aaPredicted RBP10.94□□□□□ -0.66
TMEM116-217ENST00000552801 IL1R1P14778 569 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 HIBADHP31937 336 aaKnown RBP10.94□□□□□ -0.66
TMEM116-217ENST00000552801 FOXO4P98177 505 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 CAVIN4Q5BKX8 364 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
TMEM116-217ENST00000552801 MFSD14BQ5SR56 506 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 BEND3Q5T5X7 828 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 MTMR14Q8NCE2 650 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
TMEM116-217ENST00000552801 TMOD2Q9NZR1 351 aa10.94□□□□□ -0.66
TMEM116-217ENST00000552801 TTF2Q9UNY4 1162 aaKnown RBP10.94□□□□□ -0.66
TMEM116-217ENST00000552801 UNCXA6NJT0 531 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 UBE4AQ14139 1066 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 ARHGEF6Q15052 776 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 LDLRAD1Q5T700 205 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 ANKRD13AQ8IZ07 590 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 WNK4Q96J92 1243 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 TRIM17Q9Y577 477 aa10.93□□□□□ -0.66
TMEM116-217ENST00000552801 ZNF646O15015 1829 aaPredicted RBP10.93□□□□□ -0.66
TMEM116-217ENST00000552801 SLC34A2O95436 690 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 CHAF1AQ13111 956 aaPredicted RBP10.92□□□□□ -0.66
TMEM116-217ENST00000552801 RASA3Q14644 834 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 METTL24Q5JXM2 366 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 CERS5Q8N5B7 392 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 PDCD7Q8N8D1 485 aaKnown RBP10.92□□□□□ -0.66
TMEM116-217ENST00000552801 ERO1AQ96HE7 468 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 ZBED3Q96IU2 234 aaPredicted RBP10.92□□□□□ -0.66
TMEM116-217ENST00000552801 PRMT6Q96LA8 375 aaPredicted RBP10.92□□□□□ -0.66
TMEM116-217ENST00000552801 FZD1Q9UP38 647 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 CSADQ9Y600 493 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 MROH5Q6ZUA9 1318 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
TMEM116-217ENST00000552801 GYG1P46976 350 aa10.91□□□□□ -0.66
TMEM116-217ENST00000552801 NBPF12Q5TAG4 269 aaPredicted RBP10.91□□□□□ -0.66
TMEM116-217ENST00000552801 TBC1D22AQ8WUA7 517 aa10.91□□□□□ -0.66
TMEM116-217ENST00000552801 HOOK2Q96ED9 719 aa10.91□□□□□ -0.66
TMEM116-217ENST00000552801 CLMNQ96JQ2 1002 aa10.91□□□□□ -0.66
TMEM116-217ENST00000552801 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
TMEM116-217ENST00000552801 TCP10L2B9ZVM9 353 aa10.9□□□□□ -0.66
TMEM116-217ENST00000552801 MAP3K11Q16584 847 aa10.9□□□□□ -0.66
TMEM116-217ENST00000552801 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
TMEM116-217ENST00000552801 INTS3Q68E01 1043 aaKnown RBP10.9□□□□□ -0.66
TMEM116-217ENST00000552801 CFHR5Q9BXR6 569 aa10.9□□□□□ -0.66
TMEM116-217ENST00000552801 MFRPQ9BY79 579 aa10.9□□□□□ -0.66
TMEM116-217ENST00000552801 TDRD3Q9H7E2 651 aaKnown RBP10.9□□□□□ -0.66
TMEM116-217ENST00000552801 ELP3Q9H9T3 547 aa10.9□□□□□ -0.66
TMEM116-217ENST00000552801 ZNF70Q9UC06 446 aaPredicted RBP10.9□□□□□ -0.66
TMEM116-217ENST00000552801 FAM205AQ6ZU69 1335 aa10.9□□□□□ -0.66
TMEM116-217ENST00000552801 CRKP46108 304 aa10.9□□□□□ -0.67
TMEM116-217ENST00000552801 EPHA10Q5JZY3 1008 aa10.9□□□□□ -0.67
TMEM116-217ENST00000552801 DZIP1LQ8IYY4 767 aaKnown RBP10.9□□□□□ -0.67
TMEM116-217ENST00000552801 TDRD7Q8NHU6 1098 aaKnown RBP10.9□□□□□ -0.67
TMEM116-217ENST00000552801 TEKT1Q969V4 418 aa10.9□□□□□ -0.67
TMEM116-217ENST00000552801 OPTNQ96CV9 577 aa10.9□□□□□ -0.67
TMEM116-217ENST00000552801 SUCLG2Q96I99 432 aa10.9□□□□□ -0.67
TMEM116-217ENST00000552801 PCDHAC2Q9Y5I4 1007 aa10.9□□□□□ -0.67
TMEM116-217ENST00000552801 MAST3O60307 1309 aa10.89□□□□□ -0.67
TMEM116-217ENST00000552801 IFIT1P09914 478 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms