RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 PPP4R2Q9NY27 417 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 GPN3Q9UHW5 284 aaPredicted RBP5.42□□□□□ -1.54
NPAS3-212ENST00000552696 AKAP2Q9Y2D5 859 aa5.42□□□□□ -1.54
NPAS3-212ENST00000552696 USP17L7P0C7H9 530 aa5.41□□□□□ -1.54
NPAS3-212ENST00000552696 MFAP1P55081 439 aaKnown RBP5.41□□□□□ -1.54
NPAS3-212ENST00000552696 FGD1P98174 961 aa5.41□□□□□ -1.54
NPAS3-212ENST00000552696 RUSC1Q9BVN2 902 aa5.41□□□□□ -1.54
NPAS3-212ENST00000552696 SSBP4Q9BWG4 385 aaPredicted RBP5.41□□□□□ -1.54
NPAS3-212ENST00000552696 FBXO24O75426 580 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 ECEL1O95672 775 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 DLGAP3O95886 979 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 CTSBP07858 339 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 EIF4BP23588 611 aaKnown RBP5.4□□□□□ -1.54
NPAS3-212ENST00000552696 MAOBP27338 520 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 DDX54Q8TDD1 881 aaKnown RBP5.4□□□□□ -1.54
NPAS3-212ENST00000552696 FRMD6Q96NE9 622 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 RNF208Q9H0X6 261 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 ZFYVE1Q9HBF4 777 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 FAM8A1Q9UBU6 413 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 PARP2Q9UGN5 583 aa5.4□□□□□ -1.54
NPAS3-212ENST00000552696 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
NPAS3-212ENST00000552696 CYP11A1P05108 521 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 PSMD2Q13200 908 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 POU4F3Q15319 338 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 TPTE2Q6XPS3 522 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 TP53INP1Q96A56 240 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 FAM161BQ96MY7 647 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 CORO1BQ9BR76 489 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 BCL2L13Q9BXK5 485 aa5.39□□□□□ -1.55
NPAS3-212ENST00000552696 FURINP09958 794 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 DAB2P98082 770 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 XPCQ01831 940 aaPredicted RBP5.38□□□□□ -1.55
NPAS3-212ENST00000552696 PPP2R3AQ06190 1150 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 AP3B2Q13367 1082 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 FDX2Q6P4F2 183 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 DZIP1LQ8IYY4 767 aaKnown RBP5.38□□□□□ -1.55
NPAS3-212ENST00000552696 GIPC2Q8TF65 315 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 UBL7Q96S82 380 aaPredicted RBP5.38□□□□□ -1.55
NPAS3-212ENST00000552696 TMPRSS13Q9BYE2 586 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 CEP41Q9BYV8 373 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 TMEM39AQ9NV64 488 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 PPM1HQ9ULR3 514 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 AK5Q9Y6K8 562 aa5.38□□□□□ -1.55
NPAS3-212ENST00000552696 ENC1O14682 589 aa5.37□□□□□ -1.55
NPAS3-212ENST00000552696 PREPP48147 710 aa5.37□□□□□ -1.55
NPAS3-212ENST00000552696 RSPO4Q2I0M5 234 aaPredicted RBP5.37□□□□□ -1.55
NPAS3-212ENST00000552696 NUTM2GQ5VZR2 741 aa5.37□□□□□ -1.55
NPAS3-212ENST00000552696 ANKRD34AQ69YU3 496 aa5.37□□□□□ -1.55
NPAS3-212ENST00000552696 TMC4Q7Z404 712 aa5.37□□□□□ -1.55
NPAS3-212ENST00000552696 SULF2Q8IWU5 870 aa5.37□□□□□ -1.55
NPAS3-212ENST00000552696 NECAB3Q96P71 396 aaPredicted RBP5.37□□□□□ -1.55
NPAS3-212ENST00000552696 TTF2Q9UNY4 1162 aaKnown RBP5.37□□□□□ -1.55
NPAS3-212ENST00000552696 MEGF11A6BM72 1044 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 PAGE1O75459 146 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 CELA3AP09093 270 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 PDE3AQ14432 1141 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 UVSSAQ2YD98 709 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 NKAPLQ5M9Q1 402 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 HP1BP3Q5SSJ5 553 aaPredicted RBP5.36□□□□□ -1.55
NPAS3-212ENST00000552696 SMG8Q8ND04 991 aaKnown RBP5.36□□□□□ -1.55
NPAS3-212ENST00000552696 STK35Q8TDR2 534 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 ANKRD24Q8TF21 1146 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 UTP4Q969X6 686 aaKnown RBP5.36□□□□□ -1.55
NPAS3-212ENST00000552696 FAM46AQ96IP4 442 aaKnown RBP5.36□□□□□ -1.55
NPAS3-212ENST00000552696 ZC3H12CQ9C0D7 883 aaKnown RBP5.36□□□□□ -1.55
NPAS3-212ENST00000552696 CEP44Q9C0F1 390 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 SUGCTQ9HAC7 445 aa5.36□□□□□ -1.55
NPAS3-212ENST00000552696 SART1O43290 800 aaKnown RBP5.35□□□□□ -1.55
NPAS3-212ENST00000552696 DYRK3O43781 588 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 TIAF1O95411 115 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 GSTP1P09211 210 aaKnown RBP5.35□□□□□ -1.55
NPAS3-212ENST00000552696 ADH5P11766 374 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 NME2P22392 152 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 EXOSC6Q5RKV6 272 aaKnown RBP5.35□□□□□ -1.55
NPAS3-212ENST00000552696 MEI1Q5TIA1 1274 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.35□□□□□ -1.55
NPAS3-212ENST00000552696 PDZD3Q86UT5 571 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 ARMC10Q8N2F6 343 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 C12orf50Q8NA57 414 aaPredicted RBP5.35□□□□□ -1.55
NPAS3-212ENST00000552696 CCDC86Q9H6F5 360 aaKnown RBP5.35□□□□□ -1.55
NPAS3-212ENST00000552696 CYP4F12Q9HCS2 524 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 MRS2Q9HD23 443 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 VTI1BQ9UEU0 232 aa5.35□□□□□ -1.55
NPAS3-212ENST00000552696 K7ELQ4 463 aaPredicted RBP5.34□□□□□ -1.55
NPAS3-212ENST00000552696 GAS2O43903 313 aaKnown RBP5.34□□□□□ -1.55
NPAS3-212ENST00000552696 SORBS3O60504 671 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 CTSHP09668 335 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 H2AFB1P0C5Y9 115 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 H2AFB2P0C5Z0 115 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 DRD2P14416 443 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 ARNTP27540 789 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 AKAP4Q5JQC9 854 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 PRR23CQ6ZRP0 262 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 KCNB2Q92953 911 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 MYRFLQ96LU7 910 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 WDR18Q9BV38 432 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 SEMA6BQ9H3T3 888 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 CBX8Q9HC52 389 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 AP4E1Q9UPM8 1137 aa5.34□□□□□ -1.55
NPAS3-212ENST00000552696 ZNF862O60290 1169 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms