RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 PI16Q6UXB8 463 aa11.21□□□□□ -0.61
CCDC59-207ENST00000552606 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
CCDC59-207ENST00000552606 FBXW7Q969H0 707 aa11.21□□□□□ -0.61
CCDC59-207ENST00000552606 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
CCDC59-207ENST00000552606 OTOFQ9HC10 1997 aa11.21□□□□□ -0.62
CCDC59-207ENST00000552606 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
CCDC59-207ENST00000552606 CHAF1AQ13111 956 aaPredicted RBP11.2□□□□□ -0.62
CCDC59-207ENST00000552606 TRPM4Q8TD43 1214 aa11.2□□□□□ -0.62
CCDC59-207ENST00000552606 TBC1D22AQ8WUA7 517 aa11.2□□□□□ -0.62
CCDC59-207ENST00000552606 GNL3LQ9NVN8 582 aaKnown RBP11.2□□□□□ -0.62
CCDC59-207ENST00000552606 HMG20BQ9P0W2 317 aa11.2□□□□□ -0.62
CCDC59-207ENST00000552606 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
CCDC59-207ENST00000552606 DENND2AQ9ULE3 1009 aa11.2□□□□□ -0.62
CCDC59-207ENST00000552606 NAV1Q8NEY1 1877 aa11.2□□□□□ -0.62
CCDC59-207ENST00000552606 SIPA1L1O43166 1804 aa11.19□□□□□ -0.62
CCDC59-207ENST00000552606 USP17L8P0C7I0 530 aa11.19□□□□□ -0.62
CCDC59-207ENST00000552606 UQCRFS1P1P0C7P4 283 aa11.19□□□□□ -0.62
CCDC59-207ENST00000552606 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
CCDC59-207ENST00000552606 TTC39AQ5SRH9 613 aa11.19□□□□□ -0.62
CCDC59-207ENST00000552606 KIAA0825Q8IV33 1275 aa11.19□□□□□ -0.62
CCDC59-207ENST00000552606 WDR66Q8TBY9 1149 aa11.19□□□□□ -0.62
CCDC59-207ENST00000552606 ZBED3Q96IU2 234 aaPredicted RBP11.19□□□□□ -0.62
CCDC59-207ENST00000552606 RWDD1Q9H446 243 aaPredicted RBP11.19□□□□□ -0.62
CCDC59-207ENST00000552606 ADARB2Q9NS39 739 aaKnown RBP11.19□□□□□ -0.62
CCDC59-207ENST00000552606 LAMB1P07942 1786 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 POTEB2H3BUK9 544 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 IFIT2P09913 472 aaKnown RBP11.18□□□□□ -0.62
CCDC59-207ENST00000552606 PRDX5P30044 214 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 HIRAP54198 1017 aaPredicted RBP11.18□□□□□ -0.62
CCDC59-207ENST00000552606 KIF4BQ2VIQ3 1234 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 CCDC158Q5M9N0 1113 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 GORABQ5T7V8 394 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 USP50Q70EL3 339 aaPredicted RBP11.18□□□□□ -0.62
CCDC59-207ENST00000552606 SAMD7Q7Z3H4 446 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 SPATA5Q8NB90 893 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 OTUD7AQ8TE49 926 aaPredicted RBP11.18□□□□□ -0.62
CCDC59-207ENST00000552606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC59-207ENST00000552606 SUGT1Q9Y2Z0 365 aa11.18□□□□□ -0.62
CCDC59-207ENST00000552606 MYH1P12882 1939 aa11.17□□□□□ -0.62
CCDC59-207ENST00000552606 AOX1Q06278 1338 aa11.17□□□□□ -0.62
CCDC59-207ENST00000552606 FRAT2O75474 233 aaPredicted RBP11.17□□□□□ -0.62
CCDC59-207ENST00000552606 MMP14P50281 582 aa11.17□□□□□ -0.62
CCDC59-207ENST00000552606 NUCB1Q02818 461 aa11.17□□□□□ -0.62
CCDC59-207ENST00000552606 PNMA8AQ86V59 439 aaPredicted RBP11.17□□□□□ -0.62
CCDC59-207ENST00000552606 LDHDQ86WU2 507 aa11.17□□□□□ -0.62
CCDC59-207ENST00000552606 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
CCDC59-207ENST00000552606 MYOZ2Q9NPC6 264 aa11.17□□□□□ -0.62
CCDC59-207ENST00000552606 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 MAST3O60307 1309 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 ASTN2O75129 1339 aaPredicted RBP11.16□□□□□ -0.62
CCDC59-207ENST00000552606 F8W031 263 aaPredicted RBP11.16□□□□□ -0.62
CCDC59-207ENST00000552606 H7C1D1 291 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 CYP2E1P05181 493 aaPredicted RBP11.16□□□□□ -0.62
CCDC59-207ENST00000552606 ATP5JP18859 108 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 ZAP70P43403 619 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 TBC1D10BQ4KMP7 808 aaPredicted RBP11.16□□□□□ -0.62
CCDC59-207ENST00000552606 ZGPATQ8N5A5 531 aaKnown RBP11.16□□□□□ -0.62
CCDC59-207ENST00000552606 MTMR14Q8NCE2 650 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
CCDC59-207ENST00000552606 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 PGAP2Q9UHJ9 254 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 SERPINA10Q9UK55 444 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 TTF2Q9UNY4 1162 aaKnown RBP11.16□□□□□ -0.62
CCDC59-207ENST00000552606 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 NDUFB9Q9Y6M9 179 aa11.16□□□□□ -0.62
CCDC59-207ENST00000552606 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
CCDC59-207ENST00000552606 GAKO14976 1311 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 TTC41PQ6P2S7 1318 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 ATAD5Q96QE3 1844 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 WNT10BO00744 389 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 TOMM70O94826 608 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 HDLBPQ00341 1268 aaKnown RBP11.15□□□□□ -0.62
CCDC59-207ENST00000552606 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
CCDC59-207ENST00000552606 ANKRD45Q5TZF3 282 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 TSHZ3Q63HK5 1081 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 C16orf71Q8IYS4 520 aaPredicted RBP11.15□□□□□ -0.62
CCDC59-207ENST00000552606 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 LNPKQ9C0E8 428 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 ANTXR1Q9H6X2 564 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 ECHDC1Q9NTX5 307 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 HDAC9Q9UKV0 1011 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 MYH8P13535 1937 aa11.15□□□□□ -0.62
CCDC59-207ENST00000552606 PITPNM2Q9BZ72 1349 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 LDHBP07195 334 aaKnown RBP11.14□□□□□ -0.63
CCDC59-207ENST00000552606 MX1P20591 662 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 CRKP46108 304 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 NBPF9Q3BBW0 867 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 CFAP100Q494V2 611 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 TBC1D9Q6ZT07 1266 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 CHD1LQ86WJ1 897 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 OGFOD1Q8N543 542 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
CCDC59-207ENST00000552606 ZDHHC15Q96MV8 337 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 HAUS7Q99871 368 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 PIH1D3Q9NQM4 214 aaKnown RBP11.14□□□□□ -0.63
CCDC59-207ENST00000552606 GGA3Q9NZ52 723 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 DAGLAQ9Y4D2 1042 aa11.14□□□□□ -0.63
CCDC59-207ENST00000552606 THSD7BQ9C0I4 1608 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms