RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 ARMC9Q7Z3E5 817 aa17.43■□□□□ 0.38
DDX54-210ENST00000552375 CRKP46108 304 aa17.42■□□□□ 0.38
DDX54-210ENST00000552375 COPRSQ9NQ92 184 aa17.42■□□□□ 0.38
DDX54-210ENST00000552375 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
DDX54-210ENST00000552375 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
DDX54-210ENST00000552375 MTX1Q13505 466 aa17.41■□□□□ 0.38
DDX54-210ENST00000552375 TNFAIP1Q13829 316 aa17.41■□□□□ 0.38
DDX54-210ENST00000552375 GRIK5Q16478 980 aa17.41■□□□□ 0.38
DDX54-210ENST00000552375 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
DDX54-210ENST00000552375 REM2Q8IYK8 340 aaPredicted RBP17.41■□□□□ 0.38
DDX54-210ENST00000552375 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
DDX54-210ENST00000552375 PRKG1Q13976 671 aa17.4■□□□□ 0.38
DDX54-210ENST00000552375 CSRNP1Q96S65 589 aa17.4■□□□□ 0.38
DDX54-210ENST00000552375 CEP126Q9P2H0 1117 aa17.4■□□□□ 0.38
DDX54-210ENST00000552375 ZNF70Q9UC06 446 aaPredicted RBP17.4■□□□□ 0.38
DDX54-210ENST00000552375 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
DDX54-210ENST00000552375 SUGT1Q9Y2Z0 365 aa17.4■□□□□ 0.38
DDX54-210ENST00000552375 MAST3O60307 1309 aa17.4■□□□□ 0.38
DDX54-210ENST00000552375 ECM29Q5VYK3 1845 aa17.4■□□□□ 0.38
DDX54-210ENST00000552375 GNAI2P04899 355 aa17.39■□□□□ 0.37
DDX54-210ENST00000552375 RASA3Q14644 834 aa17.39■□□□□ 0.37
DDX54-210ENST00000552375 MAP3K11Q16584 847 aa17.39■□□□□ 0.37
DDX54-210ENST00000552375 LDLRAD1Q5T700 205 aa17.39■□□□□ 0.37
DDX54-210ENST00000552375 RNF186Q9NXI6 227 aa17.39■□□□□ 0.37
DDX54-210ENST00000552375 SRGAP3O43295 1099 aa17.38■□□□□ 0.37
DDX54-210ENST00000552375 PPP1R12BO60237 982 aaPredicted RBP17.38■□□□□ 0.37
DDX54-210ENST00000552375 SUPT20HL1Q3ZLR7 823 aa17.38■□□□□ 0.37
DDX54-210ENST00000552375 TEKT1Q969V4 418 aa17.38■□□□□ 0.37
DDX54-210ENST00000552375 TDRD3Q9H7E2 651 aaKnown RBP17.38■□□□□ 0.37
DDX54-210ENST00000552375 NBPF12Q5TAG4 269 aaPredicted RBP17.37■□□□□ 0.37
DDX54-210ENST00000552375 C20orf194Q5TEA3 1177 aa17.37■□□□□ 0.37
DDX54-210ENST00000552375 WDR66Q8TBY9 1149 aa17.37■□□□□ 0.37
DDX54-210ENST00000552375 FZD1Q9UP38 647 aa17.37■□□□□ 0.37
DDX54-210ENST00000552375 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
DDX54-210ENST00000552375 PNMA6EA0A0J9YXQ4 647 aa17.36■□□□□ 0.37
DDX54-210ENST00000552375 TRPA1O75762 1119 aa17.36■□□□□ 0.37
DDX54-210ENST00000552375 ABHD8Q96I13 439 aa17.36■□□□□ 0.37
DDX54-210ENST00000552375 ZDHHC15Q96MV8 337 aa17.36■□□□□ 0.37
DDX54-210ENST00000552375 MRIQ9BWK5 157 aa17.36■□□□□ 0.37
DDX54-210ENST00000552375 GNL3LQ9NVN8 582 aaKnown RBP17.36■□□□□ 0.37
DDX54-210ENST00000552375 UNCXA6NJT0 531 aa17.35■□□□□ 0.37
DDX54-210ENST00000552375 SEMA3EO15041 775 aa17.35■□□□□ 0.37
DDX54-210ENST00000552375 ZBTB22O15209 634 aa17.35■□□□□ 0.37
DDX54-210ENST00000552375 IREB2P48200 963 aaKnown RBP17.35■□□□□ 0.37
DDX54-210ENST00000552375 SREBF2Q12772 1141 aa17.35■□□□□ 0.37
DDX54-210ENST00000552375 MKRN3Q13064 507 aaKnown RBP17.35■□□□□ 0.37
DDX54-210ENST00000552375 TCP10L2B9ZVM9 353 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 ADORA1P30542 326 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 PHKA1P46020 1223 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 TNNI2P48788 182 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 SPRYD7Q5W111 196 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 CDAN1Q8IWY9 1227 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 TEPSINQ96N21 525 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 TMEM39BQ9GZU3 492 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 SALL1Q9NSC2 1324 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 TMOD2Q9NZR1 351 aa17.34■□□□□ 0.37
DDX54-210ENST00000552375 RPAP1Q9BWH6 1393 aaPredicted RBP17.33■□□□□ 0.36
DDX54-210ENST00000552375 ZBTB7BO15156 539 aaPredicted RBP17.33■□□□□ 0.36
DDX54-210ENST00000552375 PRDX5P30044 214 aa17.33■□□□□ 0.36
DDX54-210ENST00000552375 MVPQ14764 893 aaKnown RBP17.33■□□□□ 0.36
DDX54-210ENST00000552375 CCDC102BQ68D86 513 aa17.33■□□□□ 0.36
DDX54-210ENST00000552375 APOBEC3HQ6NTF7 200 aaKnown RBP17.33■□□□□ 0.36
DDX54-210ENST00000552375 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
DDX54-210ENST00000552375 DENND2AQ9ULE3 1009 aa17.33■□□□□ 0.36
DDX54-210ENST00000552375 PDS5AQ29RF7 1337 aaKnown RBP17.32■□□□□ 0.36
DDX54-210ENST00000552375 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 ZBTB48P10074 688 aaPredicted RBP17.32■□□□□ 0.36
DDX54-210ENST00000552375 MS4A1P11836 297 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 TM4SF4P48230 202 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 CACNB3P54284 484 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 TFCP2Q12800 502 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 ANKRD13AQ8IZ07 590 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 WNK4Q96J92 1243 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
DDX54-210ENST00000552375 USP2O75604 605 aaPredicted RBP17.31■□□□□ 0.36
DDX54-210ENST00000552375 RASGRF1Q13972 1273 aa17.31■□□□□ 0.36
DDX54-210ENST00000552375 FAM83AQ86UY5 434 aa17.31■□□□□ 0.36
DDX54-210ENST00000552375 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
DDX54-210ENST00000552375 SLC10A4Q96EP9 437 aa17.31■□□□□ 0.36
DDX54-210ENST00000552375 DAGLAQ9Y4D2 1042 aa17.31■□□□□ 0.36
DDX54-210ENST00000552375 MANSC4A6NHS7 340 aaPredicted RBP17.3■□□□□ 0.36
DDX54-210ENST00000552375 LDHBP07195 334 aaKnown RBP17.3■□□□□ 0.36
DDX54-210ENST00000552375 DIXDC1Q155Q3 683 aa17.3■□□□□ 0.36
DDX54-210ENST00000552375 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
DDX54-210ENST00000552375 TIMM10P62072 90 aa17.29■□□□□ 0.36
DDX54-210ENST00000552375 OS9Q13438 667 aaPredicted RBP17.29■□□□□ 0.36
DDX54-210ENST00000552375 DGKZQ13574 1117 aa17.29■□□□□ 0.36
DDX54-210ENST00000552375 CEP85Q6P2H3 762 aa17.29■□□□□ 0.36
DDX54-210ENST00000552375 ZGPATQ8N5A5 531 aaKnown RBP17.29■□□□□ 0.36
DDX54-210ENST00000552375 XAGE2Q96GT9 111 aa17.29■□□□□ 0.36
DDX54-210ENST00000552375 CFHR5Q9BXR6 569 aa17.29■□□□□ 0.36
DDX54-210ENST00000552375 DDX19BQ9UMR2 479 aa17.29■□□□□ 0.36
DDX54-210ENST00000552375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.29■□□□□ 0.36
DDX54-210ENST00000552375 CASP8AP2Q9UKL3 1982 aa17.28■□□□□ 0.36
DDX54-210ENST00000552375 POLA2Q14181 598 aa17.28■□□□□ 0.36
DDX54-210ENST00000552375 NOM1Q5C9Z4 860 aaKnown RBP17.28■□□□□ 0.36
DDX54-210ENST00000552375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms