RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 GYG1P46976 350 aa17.94■□□□□ 0.46
CHMP1A-210ENST00000551981 GTF2A2P52657 109 aa17.94■□□□□ 0.46
CHMP1A-210ENST00000551981 TMEM106CQ9BVX2 250 aa17.94■□□□□ 0.46
CHMP1A-210ENST00000551981 ZFYVE28Q9HCC9 887 aa17.94■□□□□ 0.46
CHMP1A-210ENST00000551981 CCL15-CCL14A0A0B4J2E2 113 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 TCP10L2B9ZVM9 353 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 ALDH1L1O75891 902 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 MAP3K9P80192 1104 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 VGLL4Q14135 290 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 CCL15Q16663 113 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 NBPF11Q86T75 865 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 VPS37DQ86XT2 251 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 MS4A4AQ96JQ5 239 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 FAM84BQ96KN1 310 aaPredicted RBP17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 TEPSINQ96N21 525 aa17.93■□□□□ 0.46
CHMP1A-210ENST00000551981 CRKP46108 304 aa17.92■□□□□ 0.46
CHMP1A-210ENST00000551981 BRI3BPQ8WY22 251 aa17.92■□□□□ 0.46
CHMP1A-210ENST00000551981 SRCIN1Q9C0H9 1055 aa17.92■□□□□ 0.46
CHMP1A-210ENST00000551981 TMEM39BQ9GZU3 492 aa17.92■□□□□ 0.46
CHMP1A-210ENST00000551981 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-210ENST00000551981 MROH5Q6ZUA9 1318 aa17.92■□□□□ 0.46
CHMP1A-210ENST00000551981 EN2P19622 333 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-210ENST00000551981 SLC9C1Q4G0N8 1177 aa17.91■□□□□ 0.46
CHMP1A-210ENST00000551981 SLC4A10Q6U841 1118 aa17.91■□□□□ 0.46
CHMP1A-210ENST00000551981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHMP1A-210ENST00000551981 TBC1D22AQ8WUA7 517 aa17.91■□□□□ 0.46
CHMP1A-210ENST00000551981 OTUD5Q96G74 571 aa17.91■□□□□ 0.46
CHMP1A-210ENST00000551981 ZNF333Q96JL9 665 aa17.91■□□□□ 0.46
CHMP1A-210ENST00000551981 FRAT2O75474 233 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-210ENST00000551981 HDLBPQ00341 1268 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-210ENST00000551981 CDAN1Q8IWY9 1227 aa17.9■□□□□ 0.46
CHMP1A-210ENST00000551981 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
CHMP1A-210ENST00000551981 HOOK2Q96ED9 719 aa17.9■□□□□ 0.46
CHMP1A-210ENST00000551981 MRS2Q9HD23 443 aa17.9■□□□□ 0.46
CHMP1A-210ENST00000551981 CAVIN4Q5BKX8 364 aa17.89■□□□□ 0.45
CHMP1A-210ENST00000551981 TEKT1Q969V4 418 aa17.89■□□□□ 0.45
CHMP1A-210ENST00000551981 PUS3Q9BZE2 481 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-210ENST00000551981 TMOD2Q9NZR1 351 aa17.89■□□□□ 0.45
CHMP1A-210ENST00000551981 SPDYE5A6NIY4 337 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 CETPP11597 493 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 CAP1Q01518 475 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 CHAF1AQ13111 956 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 KIF22Q14807 665 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 SUCLG2Q96I99 432 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 ZCCHC17Q9NP64 241 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 RIPOR2Q9Y4F9 1068 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 PTCH2Q9Y6C5 1203 aa17.88■□□□□ 0.45
CHMP1A-210ENST00000551981 SLC4A8Q2Y0W8 1093 aa17.87■□□□□ 0.45
CHMP1A-210ENST00000551981 METTL24Q5JXM2 366 aa17.87■□□□□ 0.45
CHMP1A-210ENST00000551981 FBXO33Q7Z6M2 555 aa17.87■□□□□ 0.45
CHMP1A-210ENST00000551981 ERO1BQ86YB8 467 aa17.87■□□□□ 0.45
CHMP1A-210ENST00000551981 IQSEC3Q9UPP2 1182 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-210ENST00000551981 CEP290O15078 2479 aa17.86■□□□□ 0.45
CHMP1A-210ENST00000551981 SNAPC2Q13487 334 aa17.86■□□□□ 0.45
CHMP1A-210ENST00000551981 WRNIP1Q96S55 665 aa17.86■□□□□ 0.45
CHMP1A-210ENST00000551981 MAST3O60307 1309 aa17.86■□□□□ 0.45
CHMP1A-210ENST00000551981 TLR2O60603 784 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 GNRH1P01148 92 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 NBPF7P0C2Y1 421 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 CACNB3P54284 484 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 GRIK5Q16478 980 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 FKBP1CQ5VVH2 108 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 DCAF15Q66K64 600 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 FAM83AQ86UY5 434 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 KAZALD1Q96I82 304 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 ZDHHC15Q96MV8 337 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 MRIQ9BWK5 157 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 SNCAIPQ9Y6H5 919 aa17.85■□□□□ 0.45
CHMP1A-210ENST00000551981 UTYO14607 1347 aa17.84■□□□□ 0.45
CHMP1A-210ENST00000551981 PDE8BO95263 885 aa17.84■□□□□ 0.45
CHMP1A-210ENST00000551981 LACTBP83111 547 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-210ENST00000551981 PPIL2Q13356 520 aa17.84■□□□□ 0.45
CHMP1A-210ENST00000551981 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-210ENST00000551981 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-210ENST00000551981 SUGT1Q9Y2Z0 365 aa17.84■□□□□ 0.45
CHMP1A-210ENST00000551981 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.45
CHMP1A-210ENST00000551981 MYH13Q9UKX3 1938 aa17.83■□□□□ 0.44
CHMP1A-210ENST00000551981 BTBD19C9JJ37 291 aa17.83■□□□□ 0.44
CHMP1A-210ENST00000551981 PRMT2P55345 433 aa17.83■□□□□ 0.44
CHMP1A-210ENST00000551981 RABL6Q3YEC7 729 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-210ENST00000551981 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
CHMP1A-210ENST00000551981 ZKSCAN4Q969J2 545 aaPredicted RBP17.83■□□□□ 0.44
CHMP1A-210ENST00000551981 ZSWIM8A7E2V4 1837 aa17.82■□□□□ 0.44
CHMP1A-210ENST00000551981 KIF16BQ96L93 1317 aa17.82■□□□□ 0.44
CHMP1A-210ENST00000551981 IRF6O14896 467 aa17.82■□□□□ 0.44
CHMP1A-210ENST00000551981 PPATQ06203 517 aa17.82■□□□□ 0.44
CHMP1A-210ENST00000551981 VGLL2Q8N8G2 317 aa17.82■□□□□ 0.44
CHMP1A-210ENST00000551981 ZNF341Q9BYN7 854 aa17.82■□□□□ 0.44
CHMP1A-210ENST00000551981 MYCP01106 439 aaPredicted RBP17.81■□□□□ 0.44
CHMP1A-210ENST00000551981 IFIT1P09914 478 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-210ENST00000551981 BCAMP50895 628 aa17.81■□□□□ 0.44
CHMP1A-210ENST00000551981 PUM3Q15397 648 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-210ENST00000551981 APOBEC3HQ6NTF7 200 aaKnown RBP17.81■□□□□ 0.44
CHMP1A-210ENST00000551981 HHIPL2Q6UWX4 724 aa17.81■□□□□ 0.44
CHMP1A-210ENST00000551981 SH3TC2Q8TF17 1288 aa17.81■□□□□ 0.44
CHMP1A-210ENST00000551981 ARHGAP39Q9C0H5 1083 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms