RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 GRIK5Q16478 980 aa27.46■■□□□ 1.99
SMARCD1-212ENST00000551966 BRI3BPQ8WY22 251 aa27.46■■□□□ 1.99
SMARCD1-212ENST00000551966 HABP4Q5JVS0 413 aaKnown RBP27.45■■□□□ 1.98
SMARCD1-212ENST00000551966 KAZALD1Q96I82 304 aa27.45■■□□□ 1.98
SMARCD1-212ENST00000551966 TMEM39BQ9GZU3 492 aa27.45■■□□□ 1.98
SMARCD1-212ENST00000551966 OTOFQ9HC10 1997 aa27.44■■□□□ 1.98
SMARCD1-212ENST00000551966 MKI67P46013 3256 aaKnown RBP27.44■■□□□ 1.98
SMARCD1-212ENST00000551966 TCP10L2B9ZVM9 353 aa27.44■■□□□ 1.98
SMARCD1-212ENST00000551966 C9orf78Q9NZ63 289 aaPredicted RBP27.44■■□□□ 1.98
SMARCD1-212ENST00000551966 CRKP46108 304 aa27.43■■□□□ 1.98
SMARCD1-212ENST00000551966 MAP3K9P80192 1104 aa27.43■■□□□ 1.98
SMARCD1-212ENST00000551966 VGLL4Q14135 290 aa27.42■■□□□ 1.98
SMARCD1-212ENST00000551966 SUCLG2Q96I99 432 aa27.42■■□□□ 1.98
SMARCD1-212ENST00000551966 RIPOR2Q9Y4F9 1068 aa27.42■■□□□ 1.98
SMARCD1-212ENST00000551966 RBBP6Q7Z6E9 1792 aaKnown RBP27.42■■□□□ 1.98
SMARCD1-212ENST00000551966 ALDH1L1O75891 902 aa27.41■■□□□ 1.98
SMARCD1-212ENST00000551966 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.41■■□□□ 1.98
SMARCD1-212ENST00000551966 CENPFP49454 3210 aa27.41■■□□□ 1.98
SMARCD1-212ENST00000551966 CCL15-CCL14A0A0B4J2E2 113 aa27.4■■□□□ 1.98
SMARCD1-212ENST00000551966 CCL15Q16663 113 aa27.4■■□□□ 1.98
SMARCD1-212ENST00000551966 FBXO33Q7Z6M2 555 aa27.4■■□□□ 1.98
SMARCD1-212ENST00000551966 FAM43AQ8N2R8 423 aa27.4■■□□□ 1.98
SMARCD1-212ENST00000551966 ZNF333Q96JL9 665 aa27.4■■□□□ 1.98
SMARCD1-212ENST00000551966 GTF2A2P52657 109 aa27.39■■□□□ 1.98
SMARCD1-212ENST00000551966 TAF1CQ15572 869 aaPredicted RBP27.39■■□□□ 1.98
SMARCD1-212ENST00000551966 ZFYVE28Q9HCC9 887 aa27.39■■□□□ 1.98
SMARCD1-212ENST00000551966 IQSEC3Q9UPP2 1182 aaPredicted RBP27.39■■□□□ 1.98
SMARCD1-212ENST00000551966 NBPF7P0C2Y1 421 aaPredicted RBP27.38■■□□□ 1.97
SMARCD1-212ENST00000551966 SLC4A10Q6U841 1118 aa27.38■■□□□ 1.97
SMARCD1-212ENST00000551966 SRCIN1Q9C0H9 1055 aa27.38■■□□□ 1.97
SMARCD1-212ENST00000551966 PTCH2Q9Y6C5 1203 aa27.38■■□□□ 1.97
SMARCD1-212ENST00000551966 KIAA0100Q14667 2235 aaKnown RBP27.37■■□□□ 1.97
SMARCD1-212ENST00000551966 TNNI2P48788 182 aa27.37■■□□□ 1.97
SMARCD1-212ENST00000551966 CACNB3P54284 484 aa27.37■■□□□ 1.97
SMARCD1-212ENST00000551966 OTUD5Q96G74 571 aa27.37■■□□□ 1.97
SMARCD1-212ENST00000551966 TMEM106CQ9BVX2 250 aa27.36■■□□□ 1.97
SMARCD1-212ENST00000551966 MRS2Q9HD23 443 aa27.36■■□□□ 1.97
SMARCD1-212ENST00000551966 HDLBPQ00341 1268 aaKnown RBP27.35■■□□□ 1.97
SMARCD1-212ENST00000551966 LRRC24Q50LG9 513 aa27.35■■□□□ 1.97
SMARCD1-212ENST00000551966 CSADQ9Y600 493 aa27.35■■□□□ 1.97
SMARCD1-212ENST00000551966 SNCAIPQ9Y6H5 919 aa27.35■■□□□ 1.97
SMARCD1-212ENST00000551966 MROH5Q6ZUA9 1318 aa27.35■■□□□ 1.97
SMARCD1-212ENST00000551966 SPDYE5A6NIY4 337 aa27.34■■□□□ 1.97
SMARCD1-212ENST00000551966 CHAF1AQ13111 956 aaPredicted RBP27.34■■□□□ 1.97
SMARCD1-212ENST00000551966 UTYO14607 1347 aa27.34■■□□□ 1.97
SMARCD1-212ENST00000551966 ARAP2Q8WZ64 1704 aa27.33■■□□□ 1.97
SMARCD1-212ENST00000551966 BRCA2P51587 3418 aa27.33■■□□□ 1.97
SMARCD1-212ENST00000551966 SLC9C1Q4G0N8 1177 aa27.33■■□□□ 1.97
SMARCD1-212ENST00000551966 ZKSCAN4Q969J2 545 aaPredicted RBP27.33■■□□□ 1.97
SMARCD1-212ENST00000551966 ARHGAP39Q9C0H5 1083 aa27.33■■□□□ 1.97
SMARCD1-212ENST00000551966 ARHGEF6Q15052 776 aa27.32■■□□□ 1.96
SMARCD1-212ENST00000551966 RABL6Q3YEC7 729 aaPredicted RBP27.32■■□□□ 1.96
SMARCD1-212ENST00000551966 NBPF11Q86T75 865 aa27.32■■□□□ 1.96
SMARCD1-212ENST00000551966 VPS37DQ86XT2 251 aa27.32■■□□□ 1.96
SMARCD1-212ENST00000551966 VGLL2Q8N8G2 317 aa27.32■■□□□ 1.96
SMARCD1-212ENST00000551966 MRIQ9BWK5 157 aa27.32■■□□□ 1.96
SMARCD1-212ENST00000551966 BICC1Q9H694 974 aaKnown RBP27.32■■□□□ 1.96
SMARCD1-212ENST00000551966 BTBD19C9JJ37 291 aa27.31■■□□□ 1.96
SMARCD1-212ENST00000551966 TLR2O60603 784 aa27.31■■□□□ 1.96
SMARCD1-212ENST00000551966 APOBEC3HQ6NTF7 200 aaKnown RBP27.31■■□□□ 1.96
SMARCD1-212ENST00000551966 ERO1BQ86YB8 467 aa27.31■■□□□ 1.96
SMARCD1-212ENST00000551966 ANKRD44Q8N8A2 993 aa27.31■■□□□ 1.96
SMARCD1-212ENST00000551966 TEKT1Q969V4 418 aa27.31■■□□□ 1.96
SMARCD1-212ENST00000551966 IRF6O14896 467 aa27.3■■□□□ 1.96
SMARCD1-212ENST00000551966 PDE8BO95263 885 aa27.3■■□□□ 1.96
SMARCD1-212ENST00000551966 CETPP11597 493 aa27.3■■□□□ 1.96
SMARCD1-212ENST00000551966 BCAMP50895 628 aa27.3■■□□□ 1.96
SMARCD1-212ENST00000551966 TBC1D22AQ8WUA7 517 aa27.3■■□□□ 1.96
SMARCD1-212ENST00000551966 ZDHHC15Q96MV8 337 aa27.3■■□□□ 1.96
SMARCD1-212ENST00000551966 MYCP01106 439 aaPredicted RBP27.29■■□□□ 1.96
SMARCD1-212ENST00000551966 CAVIN4Q5BKX8 364 aa27.29■■□□□ 1.96
SMARCD1-212ENST00000551966 METTL24Q5JXM2 366 aa27.29■■□□□ 1.96
SMARCD1-212ENST00000551966 FAM83AQ86UY5 434 aa27.29■■□□□ 1.96
SMARCD1-212ENST00000551966 WRNIP1Q96S55 665 aa27.29■■□□□ 1.96
SMARCD1-212ENST00000551966 FRAT2O75474 233 aaPredicted RBP27.28■■□□□ 1.96
SMARCD1-212ENST00000551966 FXR1P51114 621 aaKnown RBP eCLIP27.28■■□□□ 1.96
SMARCD1-212ENST00000551966 SLC4A8Q2Y0W8 1093 aa27.28■■□□□ 1.96
SMARCD1-212ENST00000551966 KLHDC4Q8TBB5 520 aa27.28■■□□□ 1.96
SMARCD1-212ENST00000551966 SH3TC2Q8TF17 1288 aa27.28■■□□□ 1.96
SMARCD1-212ENST00000551966 ZSWIM8A7E2V4 1837 aa27.27■■□□□ 1.96
SMARCD1-212ENST00000551966 LACTBP83111 547 aaPredicted RBP27.27■■□□□ 1.96
SMARCD1-212ENST00000551966 FKBP1CQ5VVH2 108 aa27.27■■□□□ 1.96
SMARCD1-212ENST00000551966 COLQQ9Y215 455 aaPredicted RBP27.27■■□□□ 1.96
SMARCD1-212ENST00000551966 SNAPC2Q13487 334 aa27.26■■□□□ 1.95
SMARCD1-212ENST00000551966 ZCCHC17Q9NP64 241 aaKnown RBP27.26■■□□□ 1.95
SMARCD1-212ENST00000551966 CTGFP29279 349 aa27.25■■□□□ 1.95
SMARCD1-212ENST00000551966 PPIL2Q13356 520 aa27.25■■□□□ 1.95
SMARCD1-212ENST00000551966 MIGA2Q7L4E1 593 aa27.25■■□□□ 1.95
SMARCD1-212ENST00000551966 FGFR2P21802 821 aa27.24■■□□□ 1.95
SMARCD1-212ENST00000551966 HHIPL2Q6UWX4 724 aa27.24■■□□□ 1.95
SMARCD1-212ENST00000551966 C17orf99Q6UX52 265 aa27.24■■□□□ 1.95
SMARCD1-212ENST00000551966 WDHD1O75717 1129 aaPredicted RBP27.23■■□□□ 1.95
SMARCD1-212ENST00000551966 ECM2O94769 699 aaPredicted RBP27.23■■□□□ 1.95
SMARCD1-212ENST00000551966 INPP5BP32019 993 aa27.23■■□□□ 1.95
SMARCD1-212ENST00000551966 KIF22Q14807 665 aa27.23■■□□□ 1.95
SMARCD1-212ENST00000551966 TMOD2Q9NZR1 351 aa27.23■■□□□ 1.95
SMARCD1-212ENST00000551966 SUGT1Q9Y2Z0 365 aa27.23■■□□□ 1.95
SMARCD1-212ENST00000551966 PPATQ06203 517 aa27.22■■□□□ 1.95
SMARCD1-212ENST00000551966 MRPL50Q8N5N7 158 aaKnown RBP27.22■■□□□ 1.95
SMARCD1-212ENST00000551966 DCAF15Q66K64 600 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms