RNA–Protein interactions for RNA: ENST00000551804.5

PFKM-225, Transcript of phosphofructokinase, muscle, human

TSL 5 BASIC

Gene PFKM, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-225	ENST00000551804	DHX58	Q96C10	678 aa		11.67	□□□□□ -0.54
PFKM-225	ENST00000551804	SEC62	Q99442	399 aa	Known RBP	11.67	□□□□□ -0.54
PFKM-225	ENST00000551804	AGXT2	Q9BYV1	514 aa		11.67	□□□□□ -0.54
PFKM-225	ENST00000551804	CMA1	P23946	247 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	STOX1	Q6ZVD7	989 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	TUBE1	Q9UJT0	475 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	CLIC4	Q9Y696	253 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	RFX7	Q2KHR2	1363 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	CARMIL3	Q8ND23	1372 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	CHMP4BP1	P59074	171 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	TUBB4B	P68371	445 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	EXOSC10	Q01780	885 aa	Known RBP	11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	GOLGA8F	Q08AF8	430 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	GOLGA8DP	Q0D2H9	430 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	MCMDC2	Q4G0Z9	681 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	PACS2	Q86VP3	889 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	TEX2	Q8IWB9	1127 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	PPM1E	Q8WY54	764 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	ZNF274	Q96GC6	653 aa	Predicted RBP	11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	RAB21	Q9UL25	225 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	MAP3K2	Q9Y2U5	619 aa		11.66	□□□□□ -0.54
PFKM-225	ENST00000551804	KIF1A	Q12756	1690 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	EIF3CL	B5ME19	914 aa	Known RBP	11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	ERLIN1	O75477	346 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	ANXA1	P04083	346 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	TBX2	Q13207	712 aa	Predicted RBP	11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	MCM6	Q14566	821 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	SRGAP1	Q7Z6B7	1085 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	EDC3	Q96F86	508 aa	Known RBP	11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	EIF3C	Q99613	913 aa	Known RBP	11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	NCOA5	Q9HCD5	579 aa	Known RBP	11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	CEMIP	Q8WUJ3	1361 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	TMEM232	C9JQI7	657 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	PFKFB1	P16118	471 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	ATP5J	P18859	108 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	KSR2	Q6VAB6	950 aa		11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	DBF4	Q9UBU7	674 aa	Predicted RBP	11.65	□□□□□ -0.54
PFKM-225	ENST00000551804	PDIA3	P30101	505 aa	Known RBP	11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	CORO7	P57737	925 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	CCDC129	Q6ZRS4	1044 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	TOGARAM2	Q6ZUX3	1019 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	BRAP	Q7Z569	592 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	MSANTD4	Q8NCY6	345 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	KAZALD1	Q96I82	304 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	SUCLG2	Q96I99	432 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	BICC1	Q9H694	974 aa	Known RBP	11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	L1RE1	Q9UN81	338 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	GRM8	O00222	908 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	ZNF609	O15014	1411 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	CUTA	O60888	179 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	CHRM1	P11229	460 aa	Predicted RBP	11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	FDPS	P14324	419 aa	Known RBP	11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	ISM2	Q6H9L7	571 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	CEP112	Q8N8E3	955 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	NCAPG	Q9BPX3	1015 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	ANKZF1	Q9H8Y5	726 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	UTY	O14607	1347 aa		11.64	□□□□□ -0.55
PFKM-225	ENST00000551804	CWF19L2	Q2TBE0	894 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	MYSM1	Q5VVJ2	828 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	FOXR1	Q6PIV2	292 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	SYNE3	Q6ZMZ3	975 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	MYCBP	Q99417	103 aa	Predicted RBP	11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	FAN1	Q9Y2M0	1017 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	POLR3D	P05423	398 aa	Predicted RBP	11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	ATP2B1	P20020	1258 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	TUBB2A	Q13885	445 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	OLFM4	Q6UX06	510 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	DHX37	Q8IY37	1157 aa	Known RBP	11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	TC2N	Q8N9U0	490 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	LINS1	Q8NG48	757 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	FAM71B	Q8TC56	605 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	TUBB2B	Q9BVA1	445 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	INTS13	Q9NVM9	706 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	FANCL	Q9NW38	375 aa		11.63	□□□□□ -0.55
PFKM-225	ENST00000551804	SYK	P43405	635 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	HSP90B2P	Q58FF3	399 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	NBPF6	Q5VWK0	638 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	ANO1	Q5XXA6	986 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	PDILT	Q8N807	584 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	C8orf76	Q96K31	380 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	NBPF4	Q96M43	638 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	DEF6	Q9H4E7	631 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	CDC23	Q9UJX2	597 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	RGPD8	O14715	1765 aa	Predicted RBP	11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	DCC	P43146	1447 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	MRC1	P22897	1456 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	N4BP1	O75113	896 aa	Known RBP	11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	PPFIA3	O75145	1194 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	C19orf44	Q9H6X5	657 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	ZSWIM4	Q9H7M6	989 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	AKAP2	Q9Y2D5	859 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	CP	P00450	1065 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	TUBB	P07437	444 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	TEF	Q10587	303 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	SPECC1L	Q69YQ0	1117 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	LRRC31	Q6UY01	552 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	PNKP	Q96T60	521 aa		11.62	□□□□□ -0.55
PFKM-225	ENST00000551804	GBP3	Q9H0R5	595 aa		11.62	□□□□□ -0.55

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