RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 HOOK2Q96ED9 719 aa19.54■□□□□ 0.72
CACNB3-220ENST00000551716 TRIM47Q96LD4 638 aa19.54■□□□□ 0.72
CACNB3-220ENST00000551716 ARHGAP39Q9C0H5 1083 aa19.54■□□□□ 0.72
CACNB3-220ENST00000551716 TDRD3Q9H7E2 651 aaKnown RBP19.54■□□□□ 0.72
CACNB3-220ENST00000551716 SRRDQ9UH36 339 aa19.54■□□□□ 0.72
CACNB3-220ENST00000551716 RANBP2P49792 3224 aaKnown RBP19.54■□□□□ 0.72
CACNB3-220ENST00000551716 FAM205AQ6ZU69 1335 aa19.53■□□□□ 0.72
CACNB3-220ENST00000551716 GRK4P32298 578 aa19.53■□□□□ 0.72
CACNB3-220ENST00000551716 IFIT5Q13325 482 aaKnown RBP19.53■□□□□ 0.72
CACNB3-220ENST00000551716 MTFR1Q15390 333 aa19.53■□□□□ 0.72
CACNB3-220ENST00000551716 UBE2Q1Q7Z7E8 422 aa19.53■□□□□ 0.72
CACNB3-220ENST00000551716 DZIP1LQ8IYY4 767 aaKnown RBP19.53■□□□□ 0.72
CACNB3-220ENST00000551716 RAET1EQ8TD07 263 aa19.53■□□□□ 0.72
CACNB3-220ENST00000551716 SHISA4Q96DD7 197 aa19.53■□□□□ 0.72
CACNB3-220ENST00000551716 TTF2Q9UNY4 1162 aaKnown RBP19.53■□□□□ 0.72
CACNB3-220ENST00000551716 AOX1Q06278 1338 aa19.52■□□□□ 0.72
CACNB3-220ENST00000551716 MYBBP1AQ9BQG0 1328 aaKnown RBP19.52■□□□□ 0.72
CACNB3-220ENST00000551716 BTBD19C9JJ37 291 aa19.52■□□□□ 0.72
CACNB3-220ENST00000551716 MNX1P50219 401 aaPredicted RBP19.52■□□□□ 0.72
CACNB3-220ENST00000551716 UBXN2AP68543 259 aa19.52■□□□□ 0.72
CACNB3-220ENST00000551716 TCP10L2B9ZVM9 353 aa19.51■□□□□ 0.71
CACNB3-220ENST00000551716 SNAP23O00161 211 aa19.51■□□□□ 0.71
CACNB3-220ENST00000551716 PSMC4P43686 418 aa19.51■□□□□ 0.71
CACNB3-220ENST00000551716 MFSD14BQ5SR56 506 aa19.51■□□□□ 0.71
CACNB3-220ENST00000551716 C17orf99Q6UX52 265 aa19.51■□□□□ 0.71
CACNB3-220ENST00000551716 TMEM39BQ9GZU3 492 aa19.51■□□□□ 0.71
CACNB3-220ENST00000551716 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
CACNB3-220ENST00000551716 CCL5P13501 91 aa19.5■□□□□ 0.71
CACNB3-220ENST00000551716 CASP7P55210 303 aa19.5■□□□□ 0.71
CACNB3-220ENST00000551716 PPIL2Q13356 520 aa19.5■□□□□ 0.71
CACNB3-220ENST00000551716 RNF208Q9H0X6 261 aa19.5■□□□□ 0.71
CACNB3-220ENST00000551716 BIN2Q9UBW5 565 aaPredicted RBP19.5■□□□□ 0.71
CACNB3-220ENST00000551716 JAG2Q9Y219 1238 aa19.5■□□□□ 0.71
CACNB3-220ENST00000551716 RIPOR2Q9Y4F9 1068 aa19.5■□□□□ 0.71
CACNB3-220ENST00000551716 MYH3P11055 1940 aa19.49■□□□□ 0.71
CACNB3-220ENST00000551716 A0A0C4DFX4 3053 aa19.49■□□□□ 0.71
CACNB3-220ENST00000551716 ECM29Q5VYK3 1845 aa19.49■□□□□ 0.71
CACNB3-220ENST00000551716 IRF6O14896 467 aa19.49■□□□□ 0.71
CACNB3-220ENST00000551716 FMNL1O95466 1100 aaPredicted RBP19.49■□□□□ 0.71
CACNB3-220ENST00000551716 CUL9Q8IWT3 2517 aa19.49■□□□□ 0.71
CACNB3-220ENST00000551716 CRKP46108 304 aa19.48■□□□□ 0.71
CACNB3-220ENST00000551716 HDLBPQ00341 1268 aaKnown RBP19.48■□□□□ 0.71
CACNB3-220ENST00000551716 PPATQ06203 517 aa19.48■□□□□ 0.71
CACNB3-220ENST00000551716 LINS1Q8NG48 757 aa19.48■□□□□ 0.71
CACNB3-220ENST00000551716 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
CACNB3-220ENST00000551716 SNCAIPQ9Y6H5 919 aa19.48■□□□□ 0.71
CACNB3-220ENST00000551716 SPEF2Q9C093 1822 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 APAF1O14727 1248 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 EVI5O60447 810 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 SLC4A2P04920 1241 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 OSBPP22059 807 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 HIBADHP31937 336 aaKnown RBP19.47■□□□□ 0.71
CACNB3-220ENST00000551716 GPR153Q6NV75 609 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 ANKRD23Q86SG2 305 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 CDAN1Q8IWY9 1227 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 WRNIP1Q96S55 665 aa19.47■□□□□ 0.71
CACNB3-220ENST00000551716 FARP2O94887 1054 aaPredicted RBP19.46■□□□□ 0.71
CACNB3-220ENST00000551716 FKBP1CQ5VVH2 108 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 DCAF15Q66K64 600 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 LDHAL6AQ6ZMR3 332 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 TSPYL6Q8N831 410 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 U2AF1L4Q8WU68 220 aaKnown RBP19.46■□□□□ 0.71
CACNB3-220ENST00000551716 TMOD2Q9NZR1 351 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 CPA4Q9UI42 421 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 MYPNQ86TC9 1320 aa19.46■□□□□ 0.71
CACNB3-220ENST00000551716 PLIN1O60240 522 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 SGPL1O95470 568 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 CCDC57Q2TAC2 916 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 TAF7LQ5H9L4 462 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 FAM83AQ86UY5 434 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 SLAIN1Q8ND83 568 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 DNAAF4Q8WXU2 420 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 ZKSCAN4Q969J2 545 aaPredicted RBP19.45■□□□□ 0.7
CACNB3-220ENST00000551716 MRIQ9BWK5 157 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 CNNM1Q9NRU3 951 aa19.45■□□□□ 0.7
CACNB3-220ENST00000551716 PDHXO00330 501 aa19.44■□□□□ 0.7
CACNB3-220ENST00000551716 CTGFP29279 349 aa19.43■□□□□ 0.7
CACNB3-220ENST00000551716 FCGRTP55899 365 aa19.43■□□□□ 0.7
CACNB3-220ENST00000551716 FOXO4P98177 505 aa19.43■□□□□ 0.7
CACNB3-220ENST00000551716 G2E3Q7L622 706 aa19.43■□□□□ 0.7
CACNB3-220ENST00000551716 TBC1D22AQ8WUA7 517 aa19.43■□□□□ 0.7
CACNB3-220ENST00000551716 TEKT1Q969V4 418 aa19.43■□□□□ 0.7
CACNB3-220ENST00000551716 ZNF341Q9BYN7 854 aa19.43■□□□□ 0.7
CACNB3-220ENST00000551716 FLIIQ13045 1269 aa19.42■□□□□ 0.7
CACNB3-220ENST00000551716 FKBP5Q13451 457 aaPredicted RBP19.42■□□□□ 0.7
CACNB3-220ENST00000551716 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.42■□□□□ 0.7
CACNB3-220ENST00000551716 FAM84BQ96KN1 310 aaPredicted RBP19.42■□□□□ 0.7
CACNB3-220ENST00000551716 OTOFQ9HC10 1997 aa19.41■□□□□ 0.7
CACNB3-220ENST00000551716 SOX1O00570 391 aaPredicted RBP19.41■□□□□ 0.7
CACNB3-220ENST00000551716 ECM2O94769 699 aaPredicted RBP19.41■□□□□ 0.7
CACNB3-220ENST00000551716 TFRCP02786 760 aaKnown RBP19.41■□□□□ 0.7
CACNB3-220ENST00000551716 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
CACNB3-220ENST00000551716 VPS37DQ86XT2 251 aa19.41■□□□□ 0.7
CACNB3-220ENST00000551716 PARK7Q99497 189 aaKnown RBP19.41■□□□□ 0.7
CACNB3-220ENST00000551716 STAP2Q9UGK3 403 aa19.41■□□□□ 0.7
CACNB3-220ENST00000551716 BMP8BP34820 402 aa19.4■□□□□ 0.7
CACNB3-220ENST00000551716 GYG1P46976 350 aa19.4■□□□□ 0.7
CACNB3-220ENST00000551716 LMBR1LQ6UX01 489 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms