RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-218	ENST00000550692	WDR66	Q8TBY9	1149 aa		13.9	□□□□□ -0.18
BRF1-218	ENST00000550692	HHIPL1	Q96JK4	782 aa		13.9	□□□□□ -0.18
BRF1-218	ENST00000550692	NEUROD6	Q96NK8	337 aa		13.9	□□□□□ -0.18
BRF1-218	ENST00000550692	MYO1B	O43795	1136 aa		13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	AOC2	O75106	756 aa		13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	HDLBP	Q00341	1268 aa	Known RBP	13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	OS9	Q13438	667 aa	Predicted RBP	13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	MOB2	Q70IA6	237 aa		13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	DEFB129	Q9H1M3	183 aa		13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	TDRD3	Q9H7E2	651 aa	Known RBP	13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	VEZT	Q9HBM0	779 aa		13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	DENND2A	Q9ULE3	1009 aa		13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	DDX19B	Q9UMR2	479 aa		13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	NOP58	Q9Y2X3	529 aa	Known RBP	13.89	□□□□□ -0.19
BRF1-218	ENST00000550692	ECM29	Q5VYK3	1845 aa		13.88	□□□□□ -0.19
BRF1-218	ENST00000550692	RASGRF1	Q13972	1273 aa		13.88	□□□□□ -0.19
BRF1-218	ENST00000550692	TEKT1	Q969V4	418 aa		13.88	□□□□□ -0.19
BRF1-218	ENST00000550692	CHMP4B	Q9H444	224 aa	Known RBP	13.88	□□□□□ -0.19
BRF1-218	ENST00000550692	ZBTB40	Q9NUA8	1239 aa		13.88	□□□□□ -0.19
BRF1-218	ENST00000550692	ZNF70	Q9UC06	446 aa	Predicted RBP	13.88	□□□□□ -0.19
BRF1-218	ENST00000550692	SUGT1	Q9Y2Z0	365 aa		13.88	□□□□□ -0.19
BRF1-218	ENST00000550692	SEMA3E	O15041	775 aa		13.87	□□□□□ -0.19
BRF1-218	ENST00000550692	ZBTB22	O15209	634 aa		13.87	□□□□□ -0.19
BRF1-218	ENST00000550692	PRDX5	P30044	214 aa		13.87	□□□□□ -0.19
BRF1-218	ENST00000550692	SPDYE2	Q495Y8	402 aa		13.87	□□□□□ -0.19
BRF1-218	ENST00000550692	RGMB	Q6NW40	437 aa		13.87	□□□□□ -0.19
BRF1-218	ENST00000550692	MRI	Q9BWK5	157 aa		13.87	□□□□□ -0.19
BRF1-218	ENST00000550692	UBE2Q2L	H0YL09	131 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	FOXN1	O15353	648 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	NF2	P35240	595 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	FKBP1B	P68106	108 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	PRKG1	Q13976	671 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	TTLL12	Q14166	644 aa	Predicted RBP	13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	RASA3	Q14644	834 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	TNNI3K	Q59H18	835 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	GORAB	Q5T7V8	394 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	ZDHHC15	Q96MV8	337 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	ZIC5	Q96T25	663 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	GPR108	Q9NPR9	543 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	WBP1L	Q9NX94	342 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	EXOC6B	Q9Y2D4	811 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	FPGT-TNNI3K	V9GXZ4	949 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	MAST3	O60307	1309 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	SALL1	Q9NSC2	1324 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	PAPPA2	Q9BXP8	1791 aa		13.86	□□□□□ -0.19
BRF1-218	ENST00000550692	LDHB	P07195	334 aa	Known RBP	13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	NEFL	P07196	543 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	MAP2K2	P36507	400 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	ZNF157	P51786	506 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	CACNB3	P54284	484 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	DIXDC1	Q155Q3	683 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	HHIPL2	Q6UWX4	724 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	PI16	Q6UXB8	463 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	SIRT2	Q8IXJ6	389 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	DBNDD2	Q9BQY9	259 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	FZD1	Q9UP38	647 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	PPP2R3B	Q9Y5P8	575 aa		13.85	□□□□□ -0.19
BRF1-218	ENST00000550692	THSD7B	Q9C0I4	1608 aa		13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	FAM155A	B1AL88	458 aa	Predicted RBP	13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	TCP10L2	B9ZVM9	353 aa		13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	MAP2K1	Q02750	393 aa	Predicted RBP	13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	HMG20B	Q9P0W2	317 aa		13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	ABCF2	Q9UG63	623 aa		13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	DAGLA	Q9Y4D2	1042 aa		13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	PDS5A	Q29RF7	1337 aa	Known RBP	13.84	□□□□□ -0.19
BRF1-218	ENST00000550692	ARID4A	P29374	1257 aa	Predicted RBP	13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	MCAM	P43121	646 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	NOG	Q13253	232 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	AAMP	Q13685	434 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	TNFAIP1	Q13829	316 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	CDAN1	Q8IWY9	1227 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	ZGPAT	Q8N5A5	531 aa	Known RBP	13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	SPATA5	Q8NB90	893 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	CCDC102A	Q96A19	550 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	AIDA	Q96BJ3	306 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	EAF2	Q96CJ1	260 aa	Predicted RBP	13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	ANGEL1	Q9UNK9	670 aa	Known RBP	13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	SSC5D	A1L4H1	1573 aa		13.83	□□□□□ -0.2
BRF1-218	ENST00000550692	SLC10A3	P09131	477 aa		13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	SUPT20HL1	Q3ZLR7	823 aa		13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	TBC1D9	Q6ZT07	1266 aa		13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	ARMC9	Q7Z3E5	817 aa		13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	RASAL3	Q86YV0	1011 aa		13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	TEPSIN	Q96N21	525 aa		13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	TMEM39B	Q9GZU3	492 aa		13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	TLR7	Q9NYK1	1049 aa	Known RBP	13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	DBNL	Q9UJU6	430 aa	Known RBP	13.82	□□□□□ -0.2
BRF1-218	ENST00000550692	HMMR	O75330	724 aa		13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	UQCRFS1P1	P0C7P4	283 aa		13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	TNNI2	P48788	182 aa		13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	KIF23	Q02241	960 aa	Predicted RBP	13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	CCDC158	Q5M9N0	1113 aa		13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	TTC39A	Q5SRH9	613 aa		13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	LDLRAD1	Q5T700	205 aa		13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	CDC42EP5	Q6NZY7	148 aa		13.81	□□□□□ -0.2
BRF1-218	ENST00000550692	DZIP1	Q86YF9	867 aa	Known RBP	13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms