RNA–Protein interactions for RNA: ENST00000550543.1

TPCN1-213, Transcript of two pore segment channel 1, humanhuman

TSL 5

Gene TPCN1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-213ENST00000550543 ECM29Q5VYK3 1845 aa17.85■□□□□ 0.45
TPCN1-213ENST00000550543 FBXO33Q7Z6M2 555 aa17.85■□□□□ 0.45
TPCN1-213ENST00000550543 CLMNQ96JQ2 1002 aa17.85■□□□□ 0.45
TPCN1-213ENST00000550543 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
TPCN1-213ENST00000550543 JAG2Q9Y219 1238 aa17.85■□□□□ 0.45
TPCN1-213ENST00000550543 TRIM17Q9Y577 477 aa17.85■□□□□ 0.45
TPCN1-213ENST00000550543 SSC5DA1L4H1 1573 aa17.84■□□□□ 0.45
TPCN1-213ENST00000550543 PDE8BO95263 885 aa17.84■□□□□ 0.45
TPCN1-213ENST00000550543 MAP3K9P80192 1104 aa17.84■□□□□ 0.45
TPCN1-213ENST00000550543 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
TPCN1-213ENST00000550543 IGF2BP3O00425 579 aaKnown RBP eCLIP17.83■□□□□ 0.44
TPCN1-213ENST00000550543 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.44
TPCN1-213ENST00000550543 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.44
TPCN1-213ENST00000550543 GCC1Q96CN9 775 aa17.83■□□□□ 0.44
TPCN1-213ENST00000550543 OPTNQ96CV9 577 aa17.83■□□□□ 0.44
TPCN1-213ENST00000550543 TDRD3Q9H7E2 651 aaKnown RBP17.83■□□□□ 0.44
TPCN1-213ENST00000550543 SP3Q02447 781 aa17.82■□□□□ 0.44
TPCN1-213ENST00000550543 DCAF15Q66K64 600 aa17.82■□□□□ 0.44
TPCN1-213ENST00000550543 OTOP1Q7RTM1 612 aa17.82■□□□□ 0.44
TPCN1-213ENST00000550543 FAM83AQ86UY5 434 aa17.82■□□□□ 0.44
TPCN1-213ENST00000550543 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
TPCN1-213ENST00000550543 ZFYVE28Q9HCC9 887 aa17.82■□□□□ 0.44
TPCN1-213ENST00000550543 ZCCHC17Q9NP64 241 aaKnown RBP17.82■□□□□ 0.44
TPCN1-213ENST00000550543 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
TPCN1-213ENST00000550543 PCDHAC2Q9Y5I4 1007 aa17.82■□□□□ 0.44
TPCN1-213ENST00000550543 ZNF521Q96K83 1311 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 TCP10L2B9ZVM9 353 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 CHAF1AQ13111 956 aaPredicted RBP17.81■□□□□ 0.44
TPCN1-213ENST00000550543 CRHR2Q13324 411 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 MRPL50Q8N5N7 158 aaKnown RBP17.81■□□□□ 0.44
TPCN1-213ENST00000550543 WDR66Q8TBY9 1149 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 KAZALD1Q96I82 304 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 ZDHHC15Q96MV8 337 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 PUS3Q9BZE2 481 aaKnown RBP17.81■□□□□ 0.44
TPCN1-213ENST00000550543 ELP3Q9H9T3 547 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 FZD1Q9UP38 647 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 A0A1B0GUL6 1792 aa17.81■□□□□ 0.44
TPCN1-213ENST00000550543 SLC5A1P13866 664 aa17.8■□□□□ 0.44
TPCN1-213ENST00000550543 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
TPCN1-213ENST00000550543 HHIPL2Q6UWX4 724 aa17.8■□□□□ 0.44
TPCN1-213ENST00000550543 TEPSINQ96N21 525 aa17.8■□□□□ 0.44
TPCN1-213ENST00000550543 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
TPCN1-213ENST00000550543 GNL3LQ9NVN8 582 aaKnown RBP17.8■□□□□ 0.44
TPCN1-213ENST00000550543 CT47B1P0C2W7 299 aaPredicted RBP17.79■□□□□ 0.44
TPCN1-213ENST00000550543 CETPP11597 493 aa17.79■□□□□ 0.44
TPCN1-213ENST00000550543 NBPF11Q86T75 865 aa17.79■□□□□ 0.44
TPCN1-213ENST00000550543 ERO1BQ86YB8 467 aa17.79■□□□□ 0.44
TPCN1-213ENST00000550543 ANKRD44Q8N8A2 993 aa17.79■□□□□ 0.44
TPCN1-213ENST00000550543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
TPCN1-213ENST00000550543 LPIN2Q92539 896 aa17.79■□□□□ 0.44
TPCN1-213ENST00000550543 TMEM39BQ9GZU3 492 aa17.79■□□□□ 0.44
TPCN1-213ENST00000550543 PTPN22Q9Y2R2 807 aa17.79■□□□□ 0.44
TPCN1-213ENST00000550543 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
TPCN1-213ENST00000550543 CCL15-CCL14A0A0B4J2E2 113 aa17.78■□□□□ 0.44
TPCN1-213ENST00000550543 VGLL4Q14135 290 aa17.78■□□□□ 0.44
TPCN1-213ENST00000550543 KIF22Q14807 665 aa17.78■□□□□ 0.44
TPCN1-213ENST00000550543 TAF1CQ15572 869 aaPredicted RBP17.78■□□□□ 0.44
TPCN1-213ENST00000550543 CCL15Q16663 113 aa17.78■□□□□ 0.44
TPCN1-213ENST00000550543 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.78■□□□□ 0.44
TPCN1-213ENST00000550543 VGLL2Q8N8G2 317 aa17.78■□□□□ 0.44
TPCN1-213ENST00000550543 ARMC5Q96C12 935 aa17.78■□□□□ 0.44
TPCN1-213ENST00000550543 ARAP2Q8WZ64 1704 aa17.78■□□□□ 0.44
TPCN1-213ENST00000550543 LAMB1P07942 1786 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 SPDYE5A6NIY4 337 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 EYA2O00167 538 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 GNRH1P01148 92 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 GJA5P36382 358 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 SNAPC2Q13487 334 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 LRRC24Q50LG9 513 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 TMEM106CQ9BVX2 250 aa17.77■□□□□ 0.44
TPCN1-213ENST00000550543 CD99L2Q8TCZ2 262 aa17.76■□□□□ 0.43
TPCN1-213ENST00000550543 OTUD5Q96G74 571 aa17.76■□□□□ 0.43
TPCN1-213ENST00000550543 USP44Q9H0E7 712 aa17.76■□□□□ 0.43
TPCN1-213ENST00000550543 AOX1Q06278 1338 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 SEMA3EO15041 775 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 FGFR2P21802 821 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 BCAMP50895 628 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 PRMT2P55345 433 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 PPIL2Q13356 520 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 ZGPATQ8N5A5 531 aaKnown RBP17.75■□□□□ 0.43
TPCN1-213ENST00000550543 BRI3BPQ8WY22 251 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 SSH1Q8WYL5 1049 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 WRNIP1Q96S55 665 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 PTPN18Q99952 460 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 ZNF341Q9BYN7 854 aa17.75■□□□□ 0.43
TPCN1-213ENST00000550543 IQSEC3Q9UPP2 1182 aaPredicted RBP17.75■□□□□ 0.43
TPCN1-213ENST00000550543 CIAO1O76071 339 aa17.74■□□□□ 0.43
TPCN1-213ENST00000550543 UBTFL1P0CB47 393 aaPredicted RBP17.74■□□□□ 0.43
TPCN1-213ENST00000550543 SMC4Q9NTJ3 1288 aa17.74■□□□□ 0.43
TPCN1-213ENST00000550543 CEP126Q9P2H0 1117 aa17.74■□□□□ 0.43
TPCN1-213ENST00000550543 ZBTB22O15209 634 aa17.73■□□□□ 0.43
TPCN1-213ENST00000550543 PPATQ06203 517 aa17.73■□□□□ 0.43
TPCN1-213ENST00000550543 SLC9C1Q4G0N8 1177 aa17.73■□□□□ 0.43
TPCN1-213ENST00000550543 APOBEC3HQ6NTF7 200 aaKnown RBP17.73■□□□□ 0.43
TPCN1-213ENST00000550543 SLF2Q8IX21 1173 aa17.73■□□□□ 0.43
TPCN1-213ENST00000550543 TLR2O60603 784 aa17.72■□□□□ 0.43
TPCN1-213ENST00000550543 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
TPCN1-213ENST00000550543 FAM151AQ8WW52 585 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms