RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 ANAPC4Q9UJX5 808 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 CNGA4Q8IV77 575 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 MRPL50Q8N5N7 158 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 C8orf37Q96NL8 207 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 ELP1O95163 1332 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 TNNI2P48788 182 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 CREB3L3Q68CJ9 461 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 C16orf71Q8IYS4 520 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 V9GYY5 206 aaPredicted RBP14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 MTRF1LQ9UGC7 380 aaKnown RBP14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 PARP3Q9Y6F1 533 aa14.08□□□□□ -0.16
RAB3IP-212ENST00000550536 EPB41P11171 864 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 TCEANC2Q96MN5 208 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 NAP1L3Q99457 506 aaPredicted RBP14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 GUCA1BQ9UMX6 200 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 CFAP58Q5T655 872 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 ZC3H12CQ9C0D7 883 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 DCAF17Q5H9S7 520 aaPredicted RBP14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 NFATC2IPQ8NCF5 419 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 SHANK2Q9UPX8 1470 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 SMC1BQ8NDV3 1235 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 BICC1Q9H694 974 aaKnown RBP14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 SLC39A6Q13433 755 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 SMTNP53814 917 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 CCDC121Q6ZUS5 278 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 IQUBQ8NA54 791 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 ALDH3A1P30838 453 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 GPATCH11Q8N954 259 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 ZNF830Q96NB3 372 aaPredicted RBP14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 SELENOSQ9BQE4 189 aa14.07□□□□□ -0.16
RAB3IP-212ENST00000550536 SEL1L2Q5TEA6 688 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 SH2D4AQ9H788 454 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 ATP2C2O75185 946 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 VAV2P52735 878 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 CFAP157Q5JU67 520 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 CHST3Q7LGC8 479 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 CCDC65Q8IXS2 484 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 TAF12Q16514 161 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 DHX32Q7L7V1 743 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 MIGA1Q8NAN2 632 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 ATRIPQ8WXE1 791 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 NAP1L4Q99733 375 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 MTUS1Q9ULD2 1270 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 CCNT1O60563 726 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 DAAM2Q86T65 1068 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 ATP5DP30049 168 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 ZBTB21Q9ULJ3 1066 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 PARD3Q8TEW0 1356 aa14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 SLU7O95391 586 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 IPO4Q8TEX9 1081 aaKnown RBP14.06□□□□□ -0.16
RAB3IP-212ENST00000550536 TRERF1Q96PN7 1200 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 APOBRQ0VD83 1088 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 LUC7L2Q9Y383 392 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 WDR44Q5JSH3 913 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 CLEC11AQ9Y240 323 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 ABCC10Q5T3U5 1492 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 TERF1P54274 439 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 EYA3Q99504 573 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 KRT5P13647 590 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 AK2P54819 239 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 CCDC25Q86WR0 208 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 CTNND2Q9UQB3 1225 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 IRS4O14654 1257 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 TNNC1P63316 161 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 CNNM4Q6P4Q7 775 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 INTS4Q96HW7 963 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 AGTPBP1Q9UPW5 1226 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 TFCP2Q12800 502 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 RBM17Q96I25 401 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 RAD50Q92878 1312 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 GPR161Q8N6U8 529 aaKnown RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 LINS1Q8NG48 757 aa14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
RAB3IP-212ENST00000550536 SLC8A3P57103 927 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 IFT81Q8WYA0 676 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 CSRNP2Q9H175 543 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 LZTFL1Q9NQ48 299 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 ATP7AQ04656 1500 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 CCDC117Q8IWD4 279 aaPredicted RBP14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 PIK3C2GO75747 1445 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 VWA3AA6NCI4 1184 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 BACH1O14867 736 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 SV2BQ7L1I2 683 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 PICK1Q9NRD5 415 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 PCDHB15Q9Y5E8 787 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 CCDC186Q7Z3E2 898 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 SWAP70Q9UH65 585 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 RSPH14Q9UHP6 348 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 TUBBP07437 444 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
RAB3IP-212ENST00000550536 C8orf58Q8NAV2 365 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms