RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 DACT2Q5SW24 774 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 STRIP1Q5VSL9 837 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 PRAMEF18Q5VWM3 479 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 SLC4A10Q6U841 1118 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 ANKRD44Q8N8A2 993 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 MS4A4AQ96JQ5 239 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 MXD3Q9BW11 206 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 SRCIN1Q9C0H9 1055 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 COA1Q9GZY4 146 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 SMC4Q9NTJ3 1288 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 HDAC9Q9UKV0 1011 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 LEMD3Q9Y2U8 911 aa8.69□□□□□ -1.02
CBX5-204ENST00000550411 SNAP23O00161 211 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 MAP3K13O43283 966 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 TBC1D8O95759 1140 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 TM4SF4P48230 202 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 PKN2Q16513 984 aaKnown RBP8.68□□□□□ -1.02
CBX5-204ENST00000550411 TTLL5Q6EMB2 1281 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 LMBR1LQ6UX01 489 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 TXNRD3Q86VQ6 643 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 ZNF296Q8WUU4 475 aaPredicted RBP8.68□□□□□ -1.02
CBX5-204ENST00000550411 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 CRISPLD2Q9H0B8 497 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 TNNQ9UQP3 1299 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
CBX5-204ENST00000550411 ZNF804BA4D1E1 1349 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 ALPK3Q96L96 1907 aa8.68□□□□□ -1.02
CBX5-204ENST00000550411 SASH1O94885 1247 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 MYH8P13535 1937 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 HNRNPUQ00839 825 aaKnown RBP eCLIP8.67□□□□□ -1.02
CBX5-204ENST00000550411 SREBF2Q12772 1141 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 PRKG1Q13976 671 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 RABL6Q3YEC7 729 aaPredicted RBP8.67□□□□□ -1.02
CBX5-204ENST00000550411 ARMC9Q7Z3E5 817 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 APOBEC3FQ8IUX4 373 aaKnown RBP8.67□□□□□ -1.02
CBX5-204ENST00000550411 KIAA0825Q8IV33 1275 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 ZNF594Q96JF6 807 aaPredicted RBP8.67□□□□□ -1.02
CBX5-204ENST00000550411 MPHOSPH8Q99549 860 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 USP44Q9H0E7 712 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
CBX5-204ENST00000550411 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
CBX5-204ENST00000550411 DOCK1Q14185 1865 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 ZBED9Q6R2W3 1325 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 GPR25O00155 361 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 PRKAR2AP13861 404 aaKnown RBP8.66□□□□□ -1.02
CBX5-204ENST00000550411 GTF2IP78347 998 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 CHRNDQ07001 517 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 MKRN3Q13064 507 aaKnown RBP8.66□□□□□ -1.02
CBX5-204ENST00000550411 NOM1Q5C9Z4 860 aaKnown RBP8.66□□□□□ -1.02
CBX5-204ENST00000550411 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 LARP6Q9BRS8 491 aaKnown RBP8.66□□□□□ -1.02
CBX5-204ENST00000550411 C9orf78Q9NZ63 289 aaPredicted RBP8.66□□□□□ -1.02
CBX5-204ENST00000550411 PCDH10Q9P2E7 1040 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 NOB1Q9ULX3 412 aaKnown RBP8.66□□□□□ -1.02
CBX5-204ENST00000550411 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
CBX5-204ENST00000550411 CENPFP49454 3210 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 FOCADQ5VW36 1801 aa8.66□□□□□ -1.02
CBX5-204ENST00000550411 ANKRD18BA2A2Z9 1011 aa8.65□□□□□ -1.02
CBX5-204ENST00000550411 FKTNO75072 461 aa8.65□□□□□ -1.02
CBX5-204ENST00000550411 KCNJ4P48050 445 aa8.65□□□□□ -1.02
CBX5-204ENST00000550411 FXR2P51116 673 aaKnown RBP eCLIP8.65□□□□□ -1.02
CBX5-204ENST00000550411 PTPN12Q05209 780 aaKnown RBP8.65□□□□□ -1.02
CBX5-204ENST00000550411 FBXO46Q6PJ61 603 aaPredicted RBP8.65□□□□□ -1.02
CBX5-204ENST00000550411 HELBQ8NG08 1087 aaPredicted RBP8.65□□□□□ -1.02
CBX5-204ENST00000550411 ZBED3Q96IU2 234 aaPredicted RBP8.65□□□□□ -1.02
CBX5-204ENST00000550411 CFHR5Q9BXR6 569 aa8.65□□□□□ -1.02
CBX5-204ENST00000550411 PUS3Q9BZE2 481 aaKnown RBP8.65□□□□□ -1.02
CBX5-204ENST00000550411 CD209Q9NNX6 404 aa8.65□□□□□ -1.02
CBX5-204ENST00000550411 CHMP3Q9Y3E7 222 aa8.65□□□□□ -1.02
CBX5-204ENST00000550411 SSC5DA1L4H1 1573 aa8.65□□□□□ -1.03
CBX5-204ENST00000550411 KIF16BQ96L93 1317 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 TAF5LO75529 589 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 BCAR3O75815 825 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 ALDH1A1P00352 501 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
CBX5-204ENST00000550411 IFIT5Q13325 482 aaKnown RBP8.64□□□□□ -1.03
CBX5-204ENST00000550411 DLGAP5Q15398 846 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 LDLRAD1Q5T700 205 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 PRPF38BQ5VTL8 546 aaKnown RBP8.64□□□□□ -1.03
CBX5-204ENST00000550411 SPRYD7Q5W111 196 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 FZD1Q9UP38 647 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 MYH1P12882 1939 aa8.64□□□□□ -1.03
CBX5-204ENST00000550411 ZNFX1Q9P2E3 1918 aaKnown RBP8.63□□□□□ -1.03
CBX5-204ENST00000550411 MANSC4A6NHS7 340 aaPredicted RBP8.63□□□□□ -1.03
CBX5-204ENST00000550411 PPP1R12BO60237 982 aaPredicted RBP8.63□□□□□ -1.03
CBX5-204ENST00000550411 TRIM27P14373 513 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 INHBEP58166 350 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 C15orf52Q6ZUT6 534 aaKnown RBP8.63□□□□□ -1.03
CBX5-204ENST00000550411 VGLL2Q8N8G2 317 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 MTMR14Q8NCE2 650 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 KLHDC4Q8TBB5 520 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
CBX5-204ENST00000550411 MEIS3Q99687 375 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 API5Q9BZZ5 524 aaKnown RBP8.63□□□□□ -1.03
CBX5-204ENST00000550411 DEFB129Q9H1M3 183 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 R3HDMLQ9H3Y0 253 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 RIPOR2Q9Y4F9 1068 aa8.63□□□□□ -1.03
CBX5-204ENST00000550411 PPP2R3BQ9Y5P8 575 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms