RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 COL4A5P29400 1685 aa17.04■□□□□ 0.32
CACNB3-216ENST00000550391 PDE4DIPQ5VU43 2346 aa17.03■□□□□ 0.32
CACNB3-216ENST00000550391 ZNF646O15015 1829 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-216ENST00000550391 RNF113AO15541 343 aaKnown RBP17.03■□□□□ 0.32
CACNB3-216ENST00000550391 ECE2O60344 883 aa17.03■□□□□ 0.32
CACNB3-216ENST00000550391 ZFYP08048 801 aaPredicted RBP17.03■□□□□ 0.32
CACNB3-216ENST00000550391 IARSP41252 1262 aaKnown RBP17.03■□□□□ 0.32
CACNB3-216ENST00000550391 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.32
CACNB3-216ENST00000550391 SEC24BO95487 1268 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 CHGBP05060 677 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 RASSF7Q02833 373 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 MAP3K12Q12852 859 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.32
CACNB3-216ENST00000550391 LARGE2Q8N3Y3 721 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 ZGPATQ8N5A5 531 aaKnown RBP17.02■□□□□ 0.32
CACNB3-216ENST00000550391 ESYT1Q9BSJ8 1104 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 LRP2BPQ9P2M1 347 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 ABCF2Q9UG63 623 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 JAG2Q9Y219 1238 aa17.02■□□□□ 0.32
CACNB3-216ENST00000550391 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.31
CACNB3-216ENST00000550391 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 PSME4Q14997 1843 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 SCN9AQ15858 1988 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 TMEM88BA6NKF7 163 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 IGSF3O75054 1194 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 ADD2P35612 726 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 GTF2IP78347 998 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 SPTY2D1Q68D10 685 aaPredicted RBP17.01■□□□□ 0.31
CACNB3-216ENST00000550391 CWC27Q6UX04 472 aaKnown RBP17.01■□□□□ 0.31
CACNB3-216ENST00000550391 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 FAM227BQ96M60 508 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 IL25Q9H293 177 aa17.01■□□□□ 0.31
CACNB3-216ENST00000550391 A0A0D9SFI3 127 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 YDJCA8MPS7 323 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 SGSM2O43147 1006 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 PDE6AP16499 860 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 UBE3CQ15386 1083 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 SLFNL1Q499Z3 407 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 SLC9C2Q5TAH2 1124 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 KCNQ5Q9NR82 932 aa17■□□□□ 0.31
CACNB3-216ENST00000550391 RAD50Q92878 1312 aa16.99■□□□□ 0.31
CACNB3-216ENST00000550391 PASKQ96RG2 1323 aa16.99■□□□□ 0.31
CACNB3-216ENST00000550391 TCRBV5S4A2TA0A5A2 114 aa16.99■□□□□ 0.31
CACNB3-216ENST00000550391 REC8O95072 547 aa16.99■□□□□ 0.31
CACNB3-216ENST00000550391 PRDX5P30044 214 aa16.99■□□□□ 0.31
CACNB3-216ENST00000550391 HELLSQ9NRZ9 838 aa16.99■□□□□ 0.31
CACNB3-216ENST00000550391 RAI14Q9P0K7 980 aa16.99■□□□□ 0.31
CACNB3-216ENST00000550391 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-216ENST00000550391 MFAP1P55081 439 aaKnown RBP16.98■□□□□ 0.31
CACNB3-216ENST00000550391 FKBP1AP62942 108 aaKnown RBP16.98■□□□□ 0.31
CACNB3-216ENST00000550391 GRIK5Q16478 980 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 MFSD14BQ5SR56 506 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 STRIP1Q5VSL9 837 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 TMED8Q6PL24 325 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-216ENST00000550391 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 APPBP2Q92624 585 aa16.98■□□□□ 0.31
CACNB3-216ENST00000550391 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
CACNB3-216ENST00000550391 SEC62Q99442 399 aaKnown RBP16.98■□□□□ 0.31
CACNB3-216ENST00000550391 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
CACNB3-216ENST00000550391 LDHBP07195 334 aaKnown RBP16.97■□□□□ 0.31
CACNB3-216ENST00000550391 MECOMQ03112 1051 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 DACT2Q5SW24 774 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 CERS5Q8N5B7 392 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 FBXW7Q969H0 707 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 OSBP2Q969R2 916 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 ZNRF3Q9ULT6 936 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 SUGT1Q9Y2Z0 365 aa16.97■□□□□ 0.31
CACNB3-216ENST00000550391 MAST3O60307 1309 aa16.96■□□□□ 0.31
CACNB3-216ENST00000550391 RASSF10A6NK89 507 aa16.96■□□□□ 0.31
CACNB3-216ENST00000550391 M0R2C6 588 aa16.96■□□□□ 0.31
CACNB3-216ENST00000550391 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
CACNB3-216ENST00000550391 KIAA1211Q6ZU35 1233 aa16.96■□□□□ 0.31
CACNB3-216ENST00000550391 ZNF589Q86UQ0 364 aaPredicted RBP16.96■□□□□ 0.31
CACNB3-216ENST00000550391 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
CACNB3-216ENST00000550391 PUS7LQ9H0K6 701 aaKnown RBP16.96■□□□□ 0.31
CACNB3-216ENST00000550391 DICER1Q9UPY3 1922 aaKnown RBP16.96■□□□□ 0.3
CACNB3-216ENST00000550391 CYP7A1P22680 504 aa16.95■□□□□ 0.3
CACNB3-216ENST00000550391 NAA16Q6N069 864 aaPredicted RBP16.95■□□□□ 0.3
CACNB3-216ENST00000550391 LDHDQ86WU2 507 aa16.95■□□□□ 0.3
CACNB3-216ENST00000550391 DZIP1Q86YF9 867 aaKnown RBP16.95■□□□□ 0.3
CACNB3-216ENST00000550391 MXD3Q9BW11 206 aa16.95■□□□□ 0.3
CACNB3-216ENST00000550391 EPB41L2O43491 1005 aaKnown RBP16.94■□□□□ 0.3
CACNB3-216ENST00000550391 GSTO1P78417 241 aa16.94■□□□□ 0.3
CACNB3-216ENST00000550391 CCDC129Q6ZRS4 1044 aa16.94■□□□□ 0.3
CACNB3-216ENST00000550391 ADGRA1Q86SQ6 560 aa16.94■□□□□ 0.3
CACNB3-216ENST00000550391 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
CACNB3-216ENST00000550391 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
CACNB3-216ENST00000550391 WDR33Q9C0J8 1336 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms