RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 A0A1B0GUL7 405 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 UNCXA6NJT0 531 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 SASH1O94885 1247 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 BCAMP50895 628 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 RRP1P56182 461 aaKnown RBP8.96□□□□□ -0.98
PTCH1-219ENST00000549678 KIF23Q02241 960 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-219ENST00000549678 DLGAP5Q15398 846 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 NBPF9Q3BBW0 867 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 CEP85Q6P2H3 762 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 TDRD7Q8NHU6 1098 aaKnown RBP8.96□□□□□ -0.98
PTCH1-219ENST00000549678 ZBED3Q96IU2 234 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-219ENST00000549678 TTF2Q9UNY4 1162 aaKnown RBP8.96□□□□□ -0.98
PTCH1-219ENST00000549678 PPP2R3BQ9Y5P8 575 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 MAST3O60307 1309 aa8.96□□□□□ -0.98
PTCH1-219ENST00000549678 AKAP11Q9UKA4 1901 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 APBB1O00213 710 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 FGFR2P21802 821 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 HSP90AB4PQ58FF6 505 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 TTC39AQ5SRH9 613 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 ARMC9Q7Z3E5 817 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 FBXO33Q7Z6M2 555 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 RASAL3Q86YV0 1011 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 ERC1Q8IUD2 1116 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 RPAP2Q8IXW5 612 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-219ENST00000549678 WDR66Q8TBY9 1149 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 SSH3Q8TE77 659 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 VEZTQ9HBM0 779 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 DENND2AQ9ULE3 1009 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 FAM205AQ6ZU69 1335 aa8.95□□□□□ -0.98
PTCH1-219ENST00000549678 ADORA1P30542 326 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 TIMM10P62072 90 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-219ENST00000549678 POLA2Q14181 598 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 CFAP100Q494V2 611 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 CCDC158Q5M9N0 1113 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 C20orf194Q5TEA3 1177 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 ZGPATQ8N5A5 531 aaKnown RBP8.94□□□□□ -0.98
PTCH1-219ENST00000549678 XAGE2Q96GT9 111 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 CSRNP1Q96S65 589 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 ZIC5Q96T25 663 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 TMOD2Q9NZR1 351 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 ABCF2Q9UG63 623 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 EXOC6BQ9Y2D4 811 aa8.94□□□□□ -0.98
PTCH1-219ENST00000549678 CLRN2A0PK11 232 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 SPDYE2BA6NHP3 402 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 SEMA3EO15041 775 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 SPDYE6P0CI01 402 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 PHKA1P46020 1223 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 SREBF2Q12772 1141 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 TNFAIP1Q13829 316 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 SUPT20HL1Q3ZLR7 823 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 TNNI3KQ59H18 835 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 NOM1Q5C9Z4 860 aaKnown RBP8.93□□□□□ -0.98
PTCH1-219ENST00000549678 CCDC102BQ68D86 513 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 DZIP1Q86YF9 867 aaKnown RBP8.93□□□□□ -0.98
PTCH1-219ENST00000549678 CERS5Q8N5B7 392 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 TEKT1Q969V4 418 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 DEFB129Q9H1M3 183 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 RNF186Q9NXI6 227 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 ZBTB47Q9UFB7 747 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-219ENST00000549678 TSKSQ9UJT2 592 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 FPGT-TNNI3KV9GXZ4 949 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 AK9Q5TCS8 1911 aa8.93□□□□□ -0.98
PTCH1-219ENST00000549678 UBE2Q2LH0YL09 131 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 PPP1R12BO60237 982 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-219ENST00000549678 TRPA1O75762 1119 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 LDHBP07195 334 aaKnown RBP8.92□□□□□ -0.98
PTCH1-219ENST00000549678 UQCRFS1P1P0C7P4 283 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 CRKP46108 304 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 TM4SF4P48230 202 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 TNNI2P48788 182 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 MAP3K11Q16584 847 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 LDLRAD1Q5T700 205 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 SPTY2D1Q68D10 685 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-219ENST00000549678 CLASRPQ8N2M8 674 aaKnown RBP8.92□□□□□ -0.98
PTCH1-219ENST00000549678 MCOLN1Q9GZU1 580 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 ZBTB40Q9NUA8 1239 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.92□□□□□ -0.98
PTCH1-219ENST00000549678 SERPINA10Q9UK55 444 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 SCAF8Q9UPN6 1271 aaKnown RBP8.92□□□□□ -0.98
PTCH1-219ENST00000549678 MYH2Q9UKX2 1941 aa8.92□□□□□ -0.98
PTCH1-219ENST00000549678 ALDH1A1P00352 501 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 IFIT2P09913 472 aaKnown RBP8.91□□□□□ -0.98
PTCH1-219ENST00000549678 RGS19P49795 217 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 INHBEP58166 350 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
PTCH1-219ENST00000549678 DGKZQ13574 1117 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 AACSQ86V21 672 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 SLF2Q8IX21 1173 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 KIF1BPQ96EK5 621 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 NOL10Q9BSC4 688 aaKnown RBP8.91□□□□□ -0.98
PTCH1-219ENST00000549678 CFHR5Q9BXR6 569 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 CCDC8Q9H0W5 538 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-219ENST00000549678 IL1RAPL2Q9NP60 686 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 SUGT1Q9Y2Z0 365 aa8.91□□□□□ -0.98
PTCH1-219ENST00000549678 MANSC4A6NHS7 340 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-219ENST00000549678 CCDC85CA6NKD9 419 aa8.9□□□□□ -0.98
PTCH1-219ENST00000549678 RAB11FIP3O75154 756 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms