RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CCDC40Q4G0X9 1142 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 Q6ZUG5 572 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 ERBB3P21860 1342 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 KIF5CO60282 957 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 ARHGEF6Q15052 776 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 RILPL1Q5EBL4 403 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 GALNT17Q6IS24 598 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 TBC1D5Q92609 795 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 PSMA7O14818 248 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 RPS8P62241 208 aaKnown RBP10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 WDR78Q5VTH9 848 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 SPATA31A6Q5VVP1 1343 aa10.55□□□□□ -0.72
PPFIA2-216ENST00000549396 SYKP43405 635 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 ZNF496Q96IT1 587 aaPredicted RBP10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 NAA15Q9BXJ9 866 aaKnown RBP10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 TAOK3Q9H2K8 898 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 STAT6P42226 847 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 HAUS3Q68CZ6 603 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 CLEC4GQ6UXB4 293 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 USP48Q86UV5 1035 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 SYCP3Q8IZU3 236 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 ZNF219Q9P2Y4 722 aaPredicted RBP10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 MTIF2P46199 727 aaKnown RBP10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 PAXIP1Q6ZW49 1069 aaPredicted RBP10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 SSH3Q8TE77 659 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 IQCDQ96DY2 449 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 BBOX1O75936 387 aa10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 CCT2P78371 535 aaKnown RBP10.54□□□□□ -0.72
PPFIA2-216ENST00000549396 GBP2P32456 591 aaPredicted RBP10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 KRT25Q7Z3Z0 450 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 LARGE2Q8N3Y3 721 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 PODXL2Q9NZ53 605 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 SPATA5Q8NB90 893 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 H7C1D1 291 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 ZBED4O75132 1171 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 MBD4O95243 580 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 FILIP1Q7Z7B0 1213 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 VEZTQ9HBM0 779 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 CEP152O94986 1710 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 RPL13P26373 211 aaKnown RBP10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 DCCP43146 1447 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 IMPG2Q9BZV3 1241 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 SEPT11Q9NVA2 429 aaKnown RBP10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 JCADQ9P266 1359 aa10.53□□□□□ -0.72
PPFIA2-216ENST00000549396 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.72
PPFIA2-216ENST00000549396 F13A1P00488 732 aa10.52□□□□□ -0.72
PPFIA2-216ENST00000549396 SIK1P57059 783 aa10.52□□□□□ -0.72
PPFIA2-216ENST00000549396 HAND2P61296 217 aa10.52□□□□□ -0.72
PPFIA2-216ENST00000549396 QTRT2Q9H974 415 aaKnown RBP10.52□□□□□ -0.72
PPFIA2-216ENST00000549396 COPRSQ9NQ92 184 aa10.52□□□□□ -0.72
PPFIA2-216ENST00000549396 SAMM50Q9Y512 469 aa10.52□□□□□ -0.72
PPFIA2-216ENST00000549396 XDHP47989 1333 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 hCG_1984214I3L0E3 225 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 RPS6KB1P23443 525 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 ZNF713Q8N859 430 aaPredicted RBP10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 TEKT1Q969V4 418 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 CLTCQ00610 1675 aaKnown RBP10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 PTPRUQ92729 1446 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 FBLN1P23142 703 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 PICALMQ13492 652 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 SWAP70Q9UH65 585 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 PAFAH1B1P43034 410 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 KRT27Q7Z3Y8 459 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 PLEKHF1Q96S99 279 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 EXOC7Q9UPT5 735 aa10.52□□□□□ -0.73
PPFIA2-216ENST00000549396 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 CHURC1Q8WUH1 139 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 SUCLG2Q96I99 432 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 ANGEL1Q9UNK9 670 aaKnown RBP10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 HS2ST1Q7LGA3 356 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 FERMT3Q86UX7 667 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 CDAN1Q8IWY9 1227 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 IQUBQ8NA54 791 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 TMEM87AQ8NBN3 555 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 FAM89AQ96GI7 184 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 EZRP15311 586 aaKnown RBP10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 SNX16P57768 344 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 DLGAP5Q15398 846 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 DRC1Q96MC2 740 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 PA2G4Q9UQ80 394 aaKnown RBP10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 E9PCH4 1651 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 LMBR1Q8WVP7 490 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 CCDC17Q96LX7 622 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 RABGAP1Q9Y3P9 1069 aa10.51□□□□□ -0.73
PPFIA2-216ENST00000549396 PATL2C9JE40 543 aaKnown RBP10.5□□□□□ -0.73
PPFIA2-216ENST00000549396 SPTLC2O15270 562 aa10.5□□□□□ -0.73
PPFIA2-216ENST00000549396 CYLC1P35663 651 aaPredicted RBP10.5□□□□□ -0.73
PPFIA2-216ENST00000549396 DTHD1Q6ZMT9 781 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms