RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 MTX1Q13505 466 aa18.25■□□□□ 0.51
LINC00661-203ENST00000549131 GRIK5Q16478 980 aa18.25■□□□□ 0.51
LINC00661-203ENST00000549131 PPP2R3BQ9Y5P8 575 aa18.25■□□□□ 0.51
LINC00661-203ENST00000549131 LAMB1P07942 1786 aa18.25■□□□□ 0.51
LINC00661-203ENST00000549131 MYH2Q9UKX2 1941 aa18.24■□□□□ 0.51
LINC00661-203ENST00000549131 CA12O43570 354 aa18.24■□□□□ 0.51
LINC00661-203ENST00000549131 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
LINC00661-203ENST00000549131 MAST3O60307 1309 aa18.23■□□□□ 0.51
LINC00661-203ENST00000549131 KIF23Q02241 960 aaPredicted RBP18.23■□□□□ 0.51
LINC00661-203ENST00000549131 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
LINC00661-203ENST00000549131 SPDYE2Q495Y8 402 aa18.23■□□□□ 0.51
LINC00661-203ENST00000549131 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
LINC00661-203ENST00000549131 DZIP1LQ8IYY4 767 aaKnown RBP18.23■□□□□ 0.51
LINC00661-203ENST00000549131 TEKT1Q969V4 418 aa18.23■□□□□ 0.51
LINC00661-203ENST00000549131 TDRD3Q9H7E2 651 aaKnown RBP18.23■□□□□ 0.51
LINC00661-203ENST00000549131 GNL3LQ9NVN8 582 aaKnown RBP18.23■□□□□ 0.51
LINC00661-203ENST00000549131 AK9Q5TCS8 1911 aa18.23■□□□□ 0.51
LINC00661-203ENST00000549131 ZNF70Q9UC06 446 aaPredicted RBP18.22■□□□□ 0.51
LINC00661-203ENST00000549131 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
LINC00661-203ENST00000549131 FZD1Q9UP38 647 aa18.22■□□□□ 0.51
LINC00661-203ENST00000549131 PNMA6EA0A0J9YXQ4 647 aa18.21■□□□□ 0.51
LINC00661-203ENST00000549131 ADORA1P30542 326 aa18.21■□□□□ 0.51
LINC00661-203ENST00000549131 PHKA1P46020 1223 aa18.21■□□□□ 0.51
LINC00661-203ENST00000549131 TFCP2Q12800 502 aa18.21■□□□□ 0.51
LINC00661-203ENST00000549131 WDR66Q8TBY9 1149 aa18.21■□□□□ 0.51
LINC00661-203ENST00000549131 CAPN15O75808 1086 aa18.2■□□□□ 0.5
LINC00661-203ENST00000549131 RLBP1P12271 317 aa18.2■□□□□ 0.5
LINC00661-203ENST00000549131 HDLBPQ00341 1268 aaKnown RBP18.2■□□□□ 0.5
LINC00661-203ENST00000549131 RASA3Q14644 834 aa18.2■□□□□ 0.5
LINC00661-203ENST00000549131 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
LINC00661-203ENST00000549131 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.2■□□□□ 0.5
LINC00661-203ENST00000549131 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
LINC00661-203ENST00000549131 A0A1B0GUL7 405 aa18.19■□□□□ 0.5
LINC00661-203ENST00000549131 TCP10L2B9ZVM9 353 aa18.19■□□□□ 0.5
LINC00661-203ENST00000549131 PPP1R12BO60237 982 aaPredicted RBP18.19■□□□□ 0.5
LINC00661-203ENST00000549131 MKRN3Q13064 507 aaKnown RBP18.19■□□□□ 0.5
LINC00661-203ENST00000549131 SUPT20HL1Q3ZLR7 823 aa18.19■□□□□ 0.5
LINC00661-203ENST00000549131 NBPF12Q5TAG4 269 aaPredicted RBP18.19■□□□□ 0.5
LINC00661-203ENST00000549131 TMOD2Q9NZR1 351 aa18.19■□□□□ 0.5
LINC00661-203ENST00000549131 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
LINC00661-203ENST00000549131 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
LINC00661-203ENST00000549131 MAST2Q6P0Q8 1798 aa18.18■□□□□ 0.5
LINC00661-203ENST00000549131 SEMA3EO15041 775 aa18.18■□□□□ 0.5
LINC00661-203ENST00000549131 TNNI2P48788 182 aa18.18■□□□□ 0.5
LINC00661-203ENST00000549131 CCDC102BQ68D86 513 aa18.18■□□□□ 0.5
LINC00661-203ENST00000549131 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
LINC00661-203ENST00000549131 PRDX5P30044 214 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 CACNB3P54284 484 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 TIMM10P62072 90 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
LINC00661-203ENST00000549131 ZDHHC15Q96MV8 337 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 NEUROD6Q96NK8 337 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 CSRNP1Q96S65 589 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 TMEM39BQ9GZU3 492 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 SAGE1Q9NXZ1 904 aa18.17■□□□□ 0.5
LINC00661-203ENST00000549131 TRPA1O75762 1119 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
LINC00661-203ENST00000549131 OS9Q13438 667 aaPredicted RBP18.16■□□□□ 0.5
LINC00661-203ENST00000549131 RASGRF1Q13972 1273 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 MVPQ14764 893 aaKnown RBP18.16■□□□□ 0.5
LINC00661-203ENST00000549131 DIXDC1Q155Q3 683 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 HHIPL2Q6UWX4 724 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 CDAN1Q8IWY9 1227 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 REM2Q8IYK8 340 aaPredicted RBP18.16■□□□□ 0.5
LINC00661-203ENST00000549131 PANK1Q8TE04 598 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 XAGE2Q96GT9 111 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.16■□□□□ 0.5
LINC00661-203ENST00000549131 SALL1Q9NSC2 1324 aa18.16■□□□□ 0.5
LINC00661-203ENST00000549131 IREB2P48200 963 aaKnown RBP18.15■□□□□ 0.5
LINC00661-203ENST00000549131 MAP3K11Q16584 847 aa18.15■□□□□ 0.5
LINC00661-203ENST00000549131 LDLRAD1Q5T700 205 aa18.15■□□□□ 0.5
LINC00661-203ENST00000549131 RNF186Q9NXI6 227 aa18.15■□□□□ 0.5
LINC00661-203ENST00000549131 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
LINC00661-203ENST00000549131 POLA2Q14181 598 aa18.14■□□□□ 0.49
LINC00661-203ENST00000549131 GORABQ5T7V8 394 aa18.14■□□□□ 0.49
LINC00661-203ENST00000549131 APOBEC3HQ6NTF7 200 aaKnown RBP18.14■□□□□ 0.49
LINC00661-203ENST00000549131 ZGPATQ8N5A5 531 aaKnown RBP18.14■□□□□ 0.49
LINC00661-203ENST00000549131 CLMNQ96JQ2 1002 aa18.14■□□□□ 0.49
LINC00661-203ENST00000549131 TEPSINQ96N21 525 aa18.14■□□□□ 0.49
LINC00661-203ENST00000549131 MRIQ9BWK5 157 aa18.14■□□□□ 0.49
LINC00661-203ENST00000549131 DAGLAQ9Y4D2 1042 aa18.14■□□□□ 0.49
LINC00661-203ENST00000549131 ZBTB7BO15156 539 aaPredicted RBP18.13■□□□□ 0.49
LINC00661-203ENST00000549131 ATP8B2P98198 1209 aa18.13■□□□□ 0.49
LINC00661-203ENST00000549131 SREBF2Q12772 1141 aa18.13■□□□□ 0.49
LINC00661-203ENST00000549131 DZIP1Q86YF9 867 aaKnown RBP18.13■□□□□ 0.49
LINC00661-203ENST00000549131 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
LINC00661-203ENST00000549131 SLC10A4Q96EP9 437 aa18.13■□□□□ 0.49
LINC00661-203ENST00000549131 ABCF2Q9UG63 623 aa18.13■□□□□ 0.49
LINC00661-203ENST00000549131 PDS5AQ29RF7 1337 aaKnown RBP18.13■□□□□ 0.49
LINC00661-203ENST00000549131 RPAP1Q9BWH6 1393 aaPredicted RBP18.13■□□□□ 0.49
LINC00661-203ENST00000549131 MS4A1P11836 297 aa18.12■□□□□ 0.49
LINC00661-203ENST00000549131 SPRYD7Q5W111 196 aa18.12■□□□□ 0.49
LINC00661-203ENST00000549131 USP2O75604 605 aaPredicted RBP18.11■□□□□ 0.49
LINC00661-203ENST00000549131 SURF6O75683 361 aaKnown RBP18.11■□□□□ 0.49
LINC00661-203ENST00000549131 ANKRD13AQ8IZ07 590 aa18.11■□□□□ 0.49
LINC00661-203ENST00000549131 WNK4Q96J92 1243 aa18.11■□□□□ 0.49
LINC00661-203ENST00000549131 RCAN3Q9UKA8 241 aa18.11■□□□□ 0.49
LINC00661-203ENST00000549131 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
LINC00661-203ENST00000549131 ZBTB22O15209 634 aa18.1■□□□□ 0.49
LINC00661-203ENST00000549131 ZBTB48P10074 688 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms