RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 FGFR2P21802 821 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 PUM3Q15397 648 aaKnown RBP7.63□□□□□ -1.19
PTPRR-207ENST00000548220 ANKRD45Q5TZF3 282 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 B4GALNT3Q6L9W6 998 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 SUPT20HQ8NEM7 779 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.63□□□□□ -1.19
PTPRR-207ENST00000548220 TATDN2Q93075 761 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 GPATCH3Q96I76 525 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 RTFDC1Q9BY42 306 aaPredicted RBP7.63□□□□□ -1.19
PTPRR-207ENST00000548220 SEC31BQ9NQW1 1179 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 PDS5AQ29RF7 1337 aaKnown RBP7.63□□□□□ -1.19
PTPRR-207ENST00000548220 LTBP1Q14766 1721 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 ARAP2Q8WZ64 1704 aa7.63□□□□□ -1.19
PTPRR-207ENST00000548220 SLX4Q8IY92 1834 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 SPEF2Q9C093 1822 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 SEMA3EO15041 775 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 ERC2O15083 957 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 ATP2B4P23634 1241 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 MMP14P50281 582 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 CHRNDQ07001 517 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 METTL24Q5JXM2 366 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 CELF1Q92879 486 aaKnown RBP7.62□□□□□ -1.19
PTPRR-207ENST00000548220 PSMD1Q99460 953 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 MTRQ99707 1265 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 RBM27Q9P2N5 1060 aaKnown RBP7.62□□□□□ -1.19
PTPRR-207ENST00000548220 PNMA3Q9UL41 463 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 EXOC6BQ9Y2D4 811 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 ARIH1Q9Y4X5 557 aaPredicted RBP7.62□□□□□ -1.19
PTPRR-207ENST00000548220 SRCAPQ6ZRS2 3230 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 LTBP3Q9NS15 1303 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 FER1L6Q2WGJ9 1857 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 CHD4Q14839 1912 aa7.62□□□□□ -1.19
PTPRR-207ENST00000548220 PPEF1O14829 653 aaPredicted RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 IFIT1P09914 478 aaKnown RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 UQCRFS1P1P0C7P4 283 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 SLC5A1P13866 664 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 ATP5JP18859 108 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 ATP2B3Q16720 1220 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 LRRC24Q50LG9 513 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 TNNI3KQ59H18 835 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 DALRD3Q5D0E6 543 aaKnown RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 PRPF40BQ6NWY9 871 aaKnown RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 CCDC24Q8N4L8 307 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 EYA3Q99504 573 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 GNL3LQ9NVN8 582 aaKnown RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 PPP1R1BQ9UD71 204 aaPredicted RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 PA2G4Q9UQ80 394 aaKnown RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 FPGT-TNNI3KV9GXZ4 949 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 V9GY48 417 aaPredicted RBP7.61□□□□□ -1.19
PTPRR-207ENST00000548220 SALL3Q9BXA9 1300 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 SNED1Q8TER0 1413 aa7.61□□□□□ -1.19
PTPRR-207ENST00000548220 A0A1B0GUL7 405 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 GRXCR2A6NFK2 248 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 NRG2O14511 850 aaPredicted RBP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 GLRX3O76003 335 aaKnown RBP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 IFIT2P09913 472 aaKnown RBP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 DPEP1P16444 411 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 TFCP2Q12800 502 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 CAVIN4Q5BKX8 364 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 CCDC158Q5M9N0 1113 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 TRAF7Q6Q0C0 670 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 MPNDQ8N594 471 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 KLHDC4Q8TBB5 520 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 ZNF622Q969S3 477 aaKnown RBP eCLIP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 EAF2Q96CJ1 260 aaPredicted RBP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 ZNF594Q96JF6 807 aaPredicted RBP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 PUS3Q9BZE2 481 aaKnown RBP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 FHDC1Q9C0D6 1143 aaPredicted RBP7.6□□□□□ -1.19
PTPRR-207ENST00000548220 SIL1Q9H173 461 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 ECHDC1Q9NTX5 307 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 GGA1Q9UJY5 639 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 WWC3Q9ULE0 1092 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 ZNF804BA4D1E1 1349 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 MED23Q9ULK4 1368 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 CACNA1SQ13698 1873 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 AKAP11Q9UKA4 1901 aa7.6□□□□□ -1.19
PTPRR-207ENST00000548220 A0A0G2JLW4 131 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 RNF40O75150 1001 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 MX1P20591 662 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 PDE1AP54750 535 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 LRRFIP1Q32MZ4 808 aaKnown RBP7.59□□□□□ -1.19
PTPRR-207ENST00000548220 CCDC93Q567U6 631 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 BMP2KLQ5H9B9 411 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 PODNQ7Z5L7 613 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 FBXO33Q7Z6M2 555 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 NLGN2Q8NFZ4 835 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 SYT17Q9BSW7 474 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 LNPKQ9C0E8 428 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 ANKIB1Q9P2G1 1089 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 FAM198AQ9UFP1 575 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 ZNF609O15014 1411 aa7.59□□□□□ -1.19
PTPRR-207ENST00000548220 DICER1Q9UPY3 1922 aaKnown RBP7.59□□□□□ -1.19
PTPRR-207ENST00000548220 GOLGB1Q14789 3259 aaKnown RBP7.59□□□□□ -1.19
PTPRR-207ENST00000548220 ARID4AP29374 1257 aaPredicted RBP7.59□□□□□ -1.2
PTPRR-207ENST00000548220 CHRNA5P30532 468 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 KCNJ4P48050 445 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 SLC4A3P48751 1232 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 TIMM10P62072 90 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 FKBP1AP62942 108 aaKnown RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms