RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 TBC1D10CQ8IV04 446 aa13.9□□□□□ -0.18
RNF41-203ENST00000547967 LCORLQ8N3X6 602 aa13.9□□□□□ -0.18
RNF41-203ENST00000547967 ATP6V1DQ9Y5K8 247 aa13.9□□□□□ -0.18
RNF41-203ENST00000547967 PFKFB2O60825 505 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 GYS1P13807 737 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 PDCP20941 246 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 CYP7A1P22680 504 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
RNF41-203ENST00000547967 TRDNQ13061 729 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 ADGRA1Q86SQ6 560 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 IFNL3Q8IZI9 196 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 AGXT2Q9BYV1 514 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 NAPBQ9H115 298 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
RNF41-203ENST00000547967 ZNF804BA4D1E1 1349 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 CARMIL3Q8ND23 1372 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 PATL2C9JE40 543 aaKnown RBP13.89□□□□□ -0.19
RNF41-203ENST00000547967 ANTXR2P58335 489 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 ZSCAN23Q3MJ62 389 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 TXNRD3Q86VQ6 643 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 MB21D2Q8IYB1 491 aaPredicted RBP13.89□□□□□ -0.19
RNF41-203ENST00000547967 ARAP2Q8WZ64 1704 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 PANK2Q9BZ23 570 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 TMEM63CQ9P1W3 806 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 ANKIB1Q9P2G1 1089 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 SLC4A4Q9Y6R1 1079 aa13.89□□□□□ -0.19
RNF41-203ENST00000547967 CTDSPL2Q05D32 466 aa13.88□□□□□ -0.19
RNF41-203ENST00000547967 PRR5LQ6MZQ0 368 aa13.88□□□□□ -0.19
RNF41-203ENST00000547967 PROM2Q8N271 834 aa13.88□□□□□ -0.19
RNF41-203ENST00000547967 FAM184AQ8NB25 1140 aa13.88□□□□□ -0.19
RNF41-203ENST00000547967 GSG1L2A8MUP6 293 aa13.88□□□□□ -0.19
RNF41-203ENST00000547967 B4E1Z4 1266 aa13.88□□□□□ -0.19
RNF41-203ENST00000547967 CTDNEP1O95476 244 aa13.88□□□□□ -0.19
RNF41-203ENST00000547967 CHAF1AQ13111 956 aaPredicted RBP13.88□□□□□ -0.19
RNF41-203ENST00000547967 ADRA2BP18089 450 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 TDO2P48775 406 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 SLC27A3Q5K4L6 730 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 NSUN7Q8NE18 718 aaKnown RBP13.87□□□□□ -0.19
RNF41-203ENST00000547967 GRPEL1Q9HAV7 217 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
RNF41-203ENST00000547967 CASZ1Q86V15 1759 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 PTPDC1A2A3K4 754 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 H3BQV1 296 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 SERPINB2P05120 415 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 HIBADHP31937 336 aaKnown RBP13.87□□□□□ -0.19
RNF41-203ENST00000547967 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 CYB5R4Q7L1T6 521 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 SDR42E1Q8WUS8 393 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 ZNF274Q96GC6 653 aaPredicted RBP13.87□□□□□ -0.19
RNF41-203ENST00000547967 ANKRD2Q9GZV1 360 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 C4AP0C0L4 1744 aa13.87□□□□□ -0.19
RNF41-203ENST00000547967 MBD3O95983 291 aa13.86□□□□□ -0.19
RNF41-203ENST00000547967 FBXO33Q7Z6M2 555 aa13.86□□□□□ -0.19
RNF41-203ENST00000547967 TOMM22Q9NS69 142 aa13.86□□□□□ -0.19
RNF41-203ENST00000547967 NEDD4P46934 1319 aa13.86□□□□□ -0.19
RNF41-203ENST00000547967 RPGRQ92834 1020 aaKnown RBP13.86□□□□□ -0.19
RNF41-203ENST00000547967 GPR101Q96P66 508 aaPredicted RBP13.86□□□□□ -0.19
RNF41-203ENST00000547967 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
RNF41-203ENST00000547967 BRWD3Q6RI45 1802 aa13.86□□□□□ -0.19
RNF41-203ENST00000547967 SYCE3A1L190 88 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 GOLGA8BA8MQT2 603 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 MRE11P49959 708 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 RRP12Q5JTH9 1297 aaKnown RBP13.85□□□□□ -0.19
RNF41-203ENST00000547967 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 MAGEB6P1A0A0J9YX57 407 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 RXRAP19793 462 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 DYNLL1P63167 89 aaKnown RBP13.85□□□□□ -0.19
RNF41-203ENST00000547967 GUCY1B3Q02153 619 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 GRAPQ13588 217 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 SMARCC2Q8TAQ2 1214 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 GRAPLQ8TC17 118 aaPredicted RBP13.85□□□□□ -0.19
RNF41-203ENST00000547967 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 SENP2Q9HC62 589 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 COL24A1Q17RW2 1714 aa13.85□□□□□ -0.19
RNF41-203ENST00000547967 ALX1Q15699 326 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 NAA16Q6N069 864 aaPredicted RBP13.84□□□□□ -0.19
RNF41-203ENST00000547967 ZNF384Q8TF68 577 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 LLPHQ9BRT6 129 aaKnown RBP13.84□□□□□ -0.19
RNF41-203ENST00000547967 TACC3Q9Y6A5 838 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 MINDY4BA8MYZ0 360 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 SMIM22K7EJ46 135 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 KDM4AO75164 1064 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 APBA3O96018 575 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 PRDX5P30044 214 aa13.84□□□□□ -0.19
RNF41-203ENST00000547967 RBM6P78332 1123 aaKnown RBP13.84□□□□□ -0.19
RNF41-203ENST00000547967 TNRC6CQ9HCJ0 1690 aaKnown RBP13.84□□□□□ -0.19
RNF41-203ENST00000547967 GNAT2P19087 354 aa13.83□□□□□ -0.19
RNF41-203ENST00000547967 ST5P78524 1137 aa13.83□□□□□ -0.19
RNF41-203ENST00000547967 DDR1Q08345 913 aa13.83□□□□□ -0.19
RNF41-203ENST00000547967 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.19
RNF41-203ENST00000547967 FBXL16Q8N461 479 aa13.83□□□□□ -0.19
RNF41-203ENST00000547967 ZSWIM5Q9P217 1185 aa13.83□□□□□ -0.19
RNF41-203ENST00000547967 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.19
RNF41-203ENST00000547967 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.19
RNF41-203ENST00000547967 PNPLA7Q6ZV29 1317 aa13.83□□□□□ -0.2
RNF41-203ENST00000547967 DOCK2Q92608 1830 aa13.83□□□□□ -0.2
RNF41-203ENST00000547967 EVCP57679 992 aa13.83□□□□□ -0.2
RNF41-203ENST00000547967 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms