RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 IL15P40933 162 aaPredicted RBP13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 CHAF1AQ13111 956 aaPredicted RBP13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 ARMC9Q7Z3E5 817 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 RASAL3Q86YV0 1011 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 VGLL2Q8N8G2 317 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 MEIS3Q99687 375 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 SIL1Q9H173 461 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 DEFB129Q9H1M3 183 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 SERPINA10Q9UK55 444 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 PPP2R3BQ9Y5P8 575 aa13.04□□□□□ -0.32
TUBA1A-204ENST00000547939 SPTBN5Q9NRC6 3674 aaKnown RBP13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 BCAR3O75815 825 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 TRIM27P14373 513 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 BCAMP50895 628 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 SUPT20HL1Q3ZLR7 823 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 FBXO46Q6PJ61 603 aaPredicted RBP13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 PRMT6Q96LA8 375 aaPredicted RBP13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 VEZTQ9HBM0 779 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 GNL3LQ9NVN8 582 aaKnown RBP13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 IQSEC3Q9UPP2 1182 aaPredicted RBP13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 PSME4Q14997 1843 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 SPEF2Q9C093 1822 aa13.03□□□□□ -0.32
TUBA1A-204ENST00000547939 CLRN2A0PK11 232 aa13.02□□□□□ -0.33
TUBA1A-204ENST00000547939 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.33
TUBA1A-204ENST00000547939 TBC1D8O95759 1140 aa13.02□□□□□ -0.33
TUBA1A-204ENST00000547939 FGFR2P21802 821 aa13.02□□□□□ -0.33
TUBA1A-204ENST00000547939 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.33
TUBA1A-204ENST00000547939 CLUAP1Q96AJ1 413 aa13.02□□□□□ -0.33
TUBA1A-204ENST00000547939 SRGAP3O43295 1099 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 PPP1R12BO60237 982 aaPredicted RBP13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 GNAI2P04899 355 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 HDLBPQ00341 1268 aaKnown RBP13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 PRKG1Q13976 671 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 WDR66Q8TBY9 1149 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 SUGT1Q9Y2Z0 365 aa13.01□□□□□ -0.33
TUBA1A-204ENST00000547939 MAST3O60307 1309 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 ZBED9Q6R2W3 1325 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 CRKP46108 304 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 TNNI2P48788 182 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 MOB2Q70IA6 237 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 FTSJ3Q8IY81 847 aaKnown RBP13□□□□□ -0.33
TUBA1A-204ENST00000547939 DZIP1LQ8IYY4 767 aaKnown RBP13□□□□□ -0.33
TUBA1A-204ENST00000547939 TEKT1Q969V4 418 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 MRIQ9BWK5 157 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 ANGEL1Q9UNK9 670 aaKnown RBP13□□□□□ -0.33
TUBA1A-204ENST00000547939 PA2G4Q9UQ80 394 aaKnown RBP13□□□□□ -0.33
TUBA1A-204ENST00000547939 AKAP2Q9Y2D5 859 aa13□□□□□ -0.33
TUBA1A-204ENST00000547939 COL1A1P02452 1464 aaPredicted RBP12.99□□□□□ -0.33
TUBA1A-204ENST00000547939 MTX1Q13505 466 aa12.99□□□□□ -0.33
TUBA1A-204ENST00000547939 RASA3Q14644 834 aa12.99□□□□□ -0.33
TUBA1A-204ENST00000547939 TDRD3Q9H7E2 651 aaKnown RBP12.99□□□□□ -0.33
TUBA1A-204ENST00000547939 TMOD2Q9NZR1 351 aa12.99□□□□□ -0.33
TUBA1A-204ENST00000547939 ZNF70Q9UC06 446 aaPredicted RBP12.99□□□□□ -0.33
TUBA1A-204ENST00000547939 PCDHAC2Q9Y5I4 1007 aa12.99□□□□□ -0.33
TUBA1A-204ENST00000547939 UNCXA6NJT0 531 aa12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 GPR25O00155 361 aa12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 NOM1Q5C9Z4 860 aaKnown RBP12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 SLC10A4Q96EP9 437 aa12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 DENND2AQ9ULE3 1009 aa12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 TTC28Q96AY4 2481 aa12.98□□□□□ -0.33
TUBA1A-204ENST00000547939 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
TUBA1A-204ENST00000547939 SEMA3EO15041 775 aa12.97□□□□□ -0.33
TUBA1A-204ENST00000547939 G3BP1Q13283 466 aaKnown RBP eCLIP12.97□□□□□ -0.33
TUBA1A-204ENST00000547939 LDLRAD1Q5T700 205 aa12.97□□□□□ -0.33
TUBA1A-204ENST00000547939 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
TUBA1A-204ENST00000547939 TCP10L2B9ZVM9 353 aa12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 EN2P19622 333 aaPredicted RBP12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 GRIK5Q16478 980 aa12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 NBPF12Q5TAG4 269 aaPredicted RBP12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 ZGPATQ8N5A5 531 aaKnown RBP12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 ZDHHC15Q96MV8 337 aa12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 TNNQ9UQP3 1299 aa12.96□□□□□ -0.33
TUBA1A-204ENST00000547939 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 MS4A1P11836 297 aa12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 TIMM10P62072 90 aa12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 TFCP2Q12800 502 aa12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 GORABQ5T7V8 394 aa12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 HOOK2Q96ED9 719 aa12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 NEUROD6Q96NK8 337 aa12.95□□□□□ -0.34
TUBA1A-204ENST00000547939 PHKA1P46020 1223 aa12.94□□□□□ -0.34
TUBA1A-204ENST00000547939 TM4SF4P48230 202 aa12.94□□□□□ -0.34
TUBA1A-204ENST00000547939 INHBEP58166 350 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms