RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 EREGO14944 169 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 ARHGAP4P98171 946 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 FKBP4Q02790 459 aaKnown RBP eCLIP7.4□□□□□ -1.22
SCAF11-210ENST00000547654 GSTM4Q03013 218 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 ALKBH2Q6NS38 261 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 TP53INP2Q8IXH6 220 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 GJD3Q8N144 294 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 FBLIM1Q8WUP2 373 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 FBXL18Q96ME1 805 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 CCDC39Q9UFE4 941 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 POLIQ9UNA4 740 aa7.4□□□□□ -1.22
SCAF11-210ENST00000547654 EIF4EBP3O60516 100 aaPredicted RBP7.39□□□□□ -1.23
SCAF11-210ENST00000547654 ICMTO60725 284 aa7.39□□□□□ -1.23
SCAF11-210ENST00000547654 DRD2P14416 443 aa7.39□□□□□ -1.23
SCAF11-210ENST00000547654 TBC1D32Q96NH3 1257 aa7.39□□□□□ -1.23
SCAF11-210ENST00000547654 BHLHE41Q9C0J9 482 aaPredicted RBP7.39□□□□□ -1.23
SCAF11-210ENST00000547654 CYP26A1O43174 497 aa7.38□□□□□ -1.23
SCAF11-210ENST00000547654 TNFRSF21O75509 655 aa7.38□□□□□ -1.23
SCAF11-210ENST00000547654 PRNPP04156 253 aa7.38□□□□□ -1.23
SCAF11-210ENST00000547654 SERPINB4P48594 390 aa7.38□□□□□ -1.23
SCAF11-210ENST00000547654 EHHADHQ08426 723 aa7.38□□□□□ -1.23
SCAF11-210ENST00000547654 SF3B2Q13435 895 aaKnown RBP7.38□□□□□ -1.23
SCAF11-210ENST00000547654 EXOSC6Q5RKV6 272 aaKnown RBP7.38□□□□□ -1.23
SCAF11-210ENST00000547654 NPM2Q86SE8 214 aaKnown RBP7.38□□□□□ -1.23
SCAF11-210ENST00000547654 C2CD4AQ8NCU7 369 aaPredicted RBP7.38□□□□□ -1.23
SCAF11-210ENST00000547654 CCDC87Q9NVE4 849 aa7.38□□□□□ -1.23
SCAF11-210ENST00000547654 DLGAP3O95886 979 aa7.37□□□□□ -1.23
SCAF11-210ENST00000547654 ESRRAP11474 423 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-210ENST00000547654 USP5P45974 858 aa7.37□□□□□ -1.23
SCAF11-210ENST00000547654 ZNF211Q13398 564 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-210ENST00000547654 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
SCAF11-210ENST00000547654 CDPF1Q6NVV7 123 aa7.37□□□□□ -1.23
SCAF11-210ENST00000547654 BSDC1Q9NW68 430 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-210ENST00000547654 FOXD3Q9UJU5 478 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-210ENST00000547654 AMOTL2Q9Y2J4 779 aa7.37□□□□□ -1.23
SCAF11-210ENST00000547654 SOX4Q06945 474 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-210ENST00000547654 HP1BP3Q5SSJ5 553 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-210ENST00000547654 ZAR1Q86SH2 424 aa7.36□□□□□ -1.23
SCAF11-210ENST00000547654 FLCNQ8NFG4 579 aa7.36□□□□□ -1.23
SCAF11-210ENST00000547654 ANO2Q9NQ90 1003 aa7.36□□□□□ -1.23
SCAF11-210ENST00000547654 LATS2Q9NRM7 1088 aa7.36□□□□□ -1.23
SCAF11-210ENST00000547654 PRKAG2Q9UGJ0 569 aa7.36□□□□□ -1.23
SCAF11-210ENST00000547654 FAM13AO94988 1023 aa7.35□□□□□ -1.23
SCAF11-210ENST00000547654 ADH5P11766 374 aa7.35□□□□□ -1.23
SCAF11-210ENST00000547654 RAB6AP20340 208 aa7.35□□□□□ -1.23
SCAF11-210ENST00000547654 ASIC4Q96FT7 647 aa7.35□□□□□ -1.23
SCAF11-210ENST00000547654 ADMP35318 185 aa7.34□□□□□ -1.23
SCAF11-210ENST00000547654 DUSP27Q5VZP5 1158 aa7.34□□□□□ -1.23
SCAF11-210ENST00000547654 OGFOD2Q6N063 350 aa7.34□□□□□ -1.23
SCAF11-210ENST00000547654 SHISA5Q8N114 240 aa7.34□□□□□ -1.23
SCAF11-210ENST00000547654 AGBL5Q8NDL9 886 aa7.34□□□□□ -1.23
SCAF11-210ENST00000547654 LRRC4CQ9HCJ2 640 aa7.34□□□□□ -1.23
SCAF11-210ENST00000547654 GNEQ9Y223 722 aaKnown RBP7.34□□□□□ -1.23
SCAF11-210ENST00000547654 FAM170BA6NMN3 283 aa7.33□□□□□ -1.24
SCAF11-210ENST00000547654 METTL12A8MUP2 240 aa7.33□□□□□ -1.24
SCAF11-210ENST00000547654 JAG1P78504 1218 aa7.33□□□□□ -1.24
SCAF11-210ENST00000547654 MAP7Q14244 749 aa7.33□□□□□ -1.24
SCAF11-210ENST00000547654 PEAR1Q5VY43 1037 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-210ENST00000547654 EZH1Q92800 747 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-210ENST00000547654 MTMR7Q9Y216 660 aa7.33□□□□□ -1.24
SCAF11-210ENST00000547654 ACTL7BQ9Y614 415 aa7.33□□□□□ -1.24
SCAF11-210ENST00000547654 ZBTB7CA1YPR0 619 aa7.32□□□□□ -1.24
SCAF11-210ENST00000547654 MAOBP27338 520 aa7.32□□□□□ -1.24
SCAF11-210ENST00000547654 CYP27A1Q02318 531 aa7.32□□□□□ -1.24
SCAF11-210ENST00000547654 PCDH1Q08174 1060 aa7.32□□□□□ -1.24
SCAF11-210ENST00000547654 CBLL1Q75N03 491 aa7.32□□□□□ -1.24
SCAF11-210ENST00000547654 FAM129BQ96TA1 746 aa7.32□□□□□ -1.24
SCAF11-210ENST00000547654 AP4E1Q9UPM8 1137 aa7.32□□□□□ -1.24
SCAF11-210ENST00000547654 CYP11A1P05108 521 aa7.31□□□□□ -1.24
SCAF11-210ENST00000547654 PDIA4P13667 645 aaKnown RBP7.31□□□□□ -1.24
SCAF11-210ENST00000547654 JUNBP17275 347 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-210ENST00000547654 AKAP4Q5JQC9 854 aa7.31□□□□□ -1.24
SCAF11-210ENST00000547654 NFXL1Q6ZNB6 911 aa7.31□□□□□ -1.24
SCAF11-210ENST00000547654 NRSN2Q9GZP1 204 aa7.31□□□□□ -1.24
SCAF11-210ENST00000547654 CLEC4MQ9H2X3 399 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-210ENST00000547654 ZFYVE1Q9HBF4 777 aa7.31□□□□□ -1.24
SCAF11-210ENST00000547654 RAD18Q9NS91 495 aa7.31□□□□□ -1.24
SCAF11-210ENST00000547654 A0A096LPE4 126 aa7.3□□□□□ -1.24
SCAF11-210ENST00000547654 A0A1W2PPZ6 126 aa7.3□□□□□ -1.24
SCAF11-210ENST00000547654 POLR3DP05423 398 aaPredicted RBP7.3□□□□□ -1.24
SCAF11-210ENST00000547654 NFICP08651 508 aa7.3□□□□□ -1.24
SCAF11-210ENST00000547654 POU4F3Q15319 338 aa7.3□□□□□ -1.24
SCAF11-210ENST00000547654 KRTAP5-3Q6L8H2 238 aa7.3□□□□□ -1.24
SCAF11-210ENST00000547654 DYMQ7RTS9 669 aa7.3□□□□□ -1.24
SCAF11-210ENST00000547654 ZFYVE28Q9HCC9 887 aa7.3□□□□□ -1.24
SCAF11-210ENST00000547654 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-210ENST00000547654 ABL1P00519 1130 aa7.29□□□□□ -1.24
SCAF11-210ENST00000547654 ITGB5P18084 799 aa7.29□□□□□ -1.24
SCAF11-210ENST00000547654 ZNF765Q7L2R6 523 aa7.29□□□□□ -1.24
SCAF11-210ENST00000547654 DDX54Q8TDD1 881 aaKnown RBP7.29□□□□□ -1.24
SCAF11-210ENST00000547654 GATA6Q92908 595 aa7.29□□□□□ -1.24
SCAF11-210ENST00000547654 CORO1BQ9BR76 489 aa7.29□□□□□ -1.24
SCAF11-210ENST00000547654 SEMA6CQ9H3T2 930 aa7.29□□□□□ -1.24
SCAF11-210ENST00000547654 LIN7BQ9HAP6 207 aa7.29□□□□□ -1.24
SCAF11-210ENST00000547654 PAK6Q9NQU5 681 aaPredicted RBP7.29□□□□□ -1.24
SCAF11-210ENST00000547654 CCDC9Q9Y3X0 531 aaKnown RBP7.29□□□□□ -1.24
SCAF11-210ENST00000547654 B4GALNT3Q6L9W6 998 aa7.28□□□□□ -1.24
SCAF11-210ENST00000547654 CCNJLQ8IV13 435 aa7.28□□□□□ -1.24
SCAF11-210ENST00000547654 POU5F2Q8N7G0 328 aa7.28□□□□□ -1.24
SCAF11-210ENST00000547654 FAM105AQ9NUU6 356 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms