RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 HHIPL2Q6UWX4 724 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 SAPCD2Q86UD0 394 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 SULF1Q8IWU6 871 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 RHPN1Q8TCX5 695 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 DBNDD2Q9BQY9 259 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 DBNLQ9UJU6 430 aaKnown RBP13.48□□□□□ -0.25
GCN1-202ENST00000547263 EXOC6BQ9Y2D4 811 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 MYH2Q9UKX2 1941 aa13.48□□□□□ -0.25
GCN1-202ENST00000547263 GAKO14976 1311 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 MYO5AQ9Y4I1 1855 aaKnown RBP13.47□□□□□ -0.25
GCN1-202ENST00000547263 SSC5DA1L4H1 1573 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 RAB11FIP3O75154 756 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 PRDX5P30044 214 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 MCAMP43121 646 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
GCN1-202ENST00000547263 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
GCN1-202ENST00000547263 APOBEC3FQ8IUX4 373 aaKnown RBP13.47□□□□□ -0.25
GCN1-202ENST00000547263 KIF1BPQ96EK5 621 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 CDCA5Q96FF9 252 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 FAM163AQ96GL9 167 aaPredicted RBP13.47□□□□□ -0.25
GCN1-202ENST00000547263 PPP2R3BQ9Y5P8 575 aa13.47□□□□□ -0.25
GCN1-202ENST00000547263 RFX7Q2KHR2 1363 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 F8W031 263 aaPredicted RBP13.46□□□□□ -0.25
GCN1-202ENST00000547263 FRAT2O75474 233 aaPredicted RBP13.46□□□□□ -0.25
GCN1-202ENST00000547263 CELF2O95319 508 aaKnown RBP13.46□□□□□ -0.25
GCN1-202ENST00000547263 UQCRFS1P1P0C7P4 283 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 FKBP1BP68106 108 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 AAMPQ13685 434 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 FKBP1CQ5VVH2 108 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.25
GCN1-202ENST00000547263 ZNF384Q8TF68 577 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 TEKT1Q969V4 418 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 NEUROD6Q96NK8 337 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 DCTPP1Q9H773 170 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 TLR7Q9NYK1 1049 aaKnown RBP13.46□□□□□ -0.25
GCN1-202ENST00000547263 PCDHB15Q9Y5E8 787 aa13.46□□□□□ -0.25
GCN1-202ENST00000547263 SPATA5Q8NB90 893 aa13.45□□□□□ -0.26
GCN1-202ENST00000547263 ZNF70Q9UC06 446 aaPredicted RBP13.45□□□□□ -0.26
GCN1-202ENST00000547263 OS9Q13438 667 aaPredicted RBP13.44□□□□□ -0.26
GCN1-202ENST00000547263 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
GCN1-202ENST00000547263 PI16Q6UXB8 463 aa13.44□□□□□ -0.26
GCN1-202ENST00000547263 TEPSINQ96N21 525 aa13.44□□□□□ -0.26
GCN1-202ENST00000547263 CRBNQ96SW2 442 aa13.44□□□□□ -0.26
GCN1-202ENST00000547263 GBA2Q9HCG7 927 aaPredicted RBP13.44□□□□□ -0.26
GCN1-202ENST00000547263 DAGLAQ9Y4D2 1042 aa13.44□□□□□ -0.26
GCN1-202ENST00000547263 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
GCN1-202ENST00000547263 MYO1BO43795 1136 aa13.43□□□□□ -0.26
GCN1-202ENST00000547263 LDHBP07195 334 aaKnown RBP13.43□□□□□ -0.26
GCN1-202ENST00000547263 DEFB115Q30KQ5 88 aa13.43□□□□□ -0.26
GCN1-202ENST00000547263 CCDC158Q5M9N0 1113 aa13.43□□□□□ -0.26
GCN1-202ENST00000547263 FAM83AQ86UY5 434 aa13.43□□□□□ -0.26
GCN1-202ENST00000547263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.43□□□□□ -0.26
GCN1-202ENST00000547263 CCDC8Q9H0W5 538 aaPredicted RBP13.43□□□□□ -0.26
GCN1-202ENST00000547263 DEFB129Q9H1M3 183 aa13.43□□□□□ -0.26
GCN1-202ENST00000547263 TDRD3Q9H7E2 651 aaKnown RBP13.43□□□□□ -0.26
GCN1-202ENST00000547263 CDK5RAP2Q96SN8 1893 aa13.42□□□□□ -0.26
GCN1-202ENST00000547263 OTOFQ9HC10 1997 aa13.42□□□□□ -0.26
GCN1-202ENST00000547263 FOCADQ5VW36 1801 aa13.42□□□□□ -0.26
GCN1-202ENST00000547263 CLRN2A0PK11 232 aa13.42□□□□□ -0.26
GCN1-202ENST00000547263 CYP2E1P05181 493 aaPredicted RBP13.42□□□□□ -0.26
GCN1-202ENST00000547263 VEGFBP49765 207 aa13.42□□□□□ -0.26
GCN1-202ENST00000547263 DIXDC1Q155Q3 683 aa13.42□□□□□ -0.26
GCN1-202ENST00000547263 SPTY2D1Q68D10 685 aaPredicted RBP13.42□□□□□ -0.26
GCN1-202ENST00000547263 CLASRPQ8N2M8 674 aaKnown RBP13.42□□□□□ -0.26
GCN1-202ENST00000547263 NSUN4Q96CB9 384 aaKnown RBP13.42□□□□□ -0.26
GCN1-202ENST00000547263 MKRN1Q9UHC7 482 aaKnown RBP13.42□□□□□ -0.26
GCN1-202ENST00000547263 SCAF8Q9UPN6 1271 aaKnown RBP13.42□□□□□ -0.26
GCN1-202ENST00000547263 FAM155AB1AL88 458 aaPredicted RBP13.41□□□□□ -0.26
GCN1-202ENST00000547263 MECOMQ03112 1051 aa13.41□□□□□ -0.26
GCN1-202ENST00000547263 TNFAIP1Q13829 316 aa13.41□□□□□ -0.26
GCN1-202ENST00000547263 RASA3Q14644 834 aa13.41□□□□□ -0.26
GCN1-202ENST00000547263 LDLRAD1Q5T700 205 aa13.41□□□□□ -0.26
GCN1-202ENST00000547263 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
GCN1-202ENST00000547263 AACSQ86V21 672 aa13.41□□□□□ -0.26
GCN1-202ENST00000547263 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
GCN1-202ENST00000547263 MROH7-TTC4A0A0A0MT08 1334 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 GPR75-ASB3A0A0A6YYF3 556 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 UNCXA6NJT0 531 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
GCN1-202ENST00000547263 ZAP70P43403 619 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 HDAC1Q13547 482 aaPredicted RBP13.4□□□□□ -0.26
GCN1-202ENST00000547263 TTC39AQ5SRH9 613 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 PRAMEF18Q5VWM3 479 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 TMED8Q6PL24 325 aaPredicted RBP13.4□□□□□ -0.26
GCN1-202ENST00000547263 C2orf69Q8N8R5 385 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 IDI2Q9BXS1 227 aa13.4□□□□□ -0.26
GCN1-202ENST00000547263 ABT1Q9ULW3 272 aaKnown RBP13.4□□□□□ -0.26
GCN1-202ENST00000547263 COL2A1P02458 1487 aaPredicted RBP13.4□□□□□ -0.26
GCN1-202ENST00000547263 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
GCN1-202ENST00000547263 MAP4K4O95819 1239 aaPredicted RBP13.39□□□□□ -0.27
GCN1-202ENST00000547263 ECE1P42892 770 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 RBM5P52756 815 aaKnown RBP eCLIP13.39□□□□□ -0.27
GCN1-202ENST00000547263 RHBDL3P58872 404 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 CDC42EP5Q6NZY7 148 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 TBC1D9Q6ZT07 1266 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 SLF2Q8IX21 1173 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms