RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.59■□□□□ 0.73
BRF1-208ENST00000546997 R3HCC1Q9Y3T6 440 aaKnown RBP19.59■□□□□ 0.73
BRF1-208ENST00000546997 CHD4Q14839 1912 aa19.58■□□□□ 0.73
BRF1-208ENST00000546997 RFX7Q2KHR2 1363 aa19.58■□□□□ 0.73
BRF1-208ENST00000546997 A0A0D9SFI3 127 aa19.58■□□□□ 0.73
BRF1-208ENST00000546997 ATP2B4P23634 1241 aa19.58■□□□□ 0.73
BRF1-208ENST00000546997 NMIQ13287 307 aaPredicted RBP19.58■□□□□ 0.73
BRF1-208ENST00000546997 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.73
BRF1-208ENST00000546997 SASS6Q6UVJ0 657 aa19.58■□□□□ 0.73
BRF1-208ENST00000546997 ZNF219Q9P2Y4 722 aaPredicted RBP19.58■□□□□ 0.73
BRF1-208ENST00000546997 PALD1Q9ULE6 856 aa19.58■□□□□ 0.73
BRF1-208ENST00000546997 HIBADHP31937 336 aaKnown RBP19.57■□□□□ 0.72
BRF1-208ENST00000546997 PIH1D3Q9NQM4 214 aaKnown RBP19.57■□□□□ 0.72
BRF1-208ENST00000546997 C7orf43Q8WVR3 580 aa19.57■□□□□ 0.72
BRF1-208ENST00000546997 RBSNQ9H1K0 784 aa19.57■□□□□ 0.72
BRF1-208ENST00000546997 UQCRHLA0A096LP55 91 aa19.56■□□□□ 0.72
BRF1-208ENST00000546997 C6orf229H3BNL8 230 aa19.56■□□□□ 0.72
BRF1-208ENST00000546997 UQCRHP07919 91 aa19.56■□□□□ 0.72
BRF1-208ENST00000546997 MCTP1Q6DN14 999 aa19.56■□□□□ 0.72
BRF1-208ENST00000546997 CAVIN1Q6NZI2 390 aaKnown RBP19.56■□□□□ 0.72
BRF1-208ENST00000546997 LRSAM1Q6UWE0 723 aa19.56■□□□□ 0.72
BRF1-208ENST00000546997 MPNDQ8N594 471 aa19.56■□□□□ 0.72
BRF1-208ENST00000546997 GNL3LQ9NVN8 582 aaKnown RBP19.56■□□□□ 0.72
BRF1-208ENST00000546997 PPP1R1BQ9UD71 204 aaPredicted RBP19.56■□□□□ 0.72
BRF1-208ENST00000546997 SNED1Q8TER0 1413 aa19.56■□□□□ 0.72
BRF1-208ENST00000546997 HIP1O00291 1037 aa19.55■□□□□ 0.72
BRF1-208ENST00000546997 C15orf52Q6ZUT6 534 aaKnown RBP19.55■□□□□ 0.72
BRF1-208ENST00000546997 MED23Q9ULK4 1368 aa19.55■□□□□ 0.72
BRF1-208ENST00000546997 MBD3O95983 291 aa19.55■□□□□ 0.72
BRF1-208ENST00000546997 HSPA4P34932 840 aa19.55■□□□□ 0.72
BRF1-208ENST00000546997 DPP8Q6V1X1 898 aaPredicted RBP19.55■□□□□ 0.72
BRF1-208ENST00000546997 NEK4P51957 841 aa19.54■□□□□ 0.72
BRF1-208ENST00000546997 TTLL6Q8N841 843 aa19.54■□□□□ 0.72
BRF1-208ENST00000546997 SEC62Q99442 399 aaKnown RBP19.54■□□□□ 0.72
BRF1-208ENST00000546997 LSG1Q9H089 658 aaKnown RBP19.54■□□□□ 0.72
BRF1-208ENST00000546997 RAD50Q92878 1312 aa19.54■□□□□ 0.72
BRF1-208ENST00000546997 TTF1Q15361 905 aaPredicted RBP19.53■□□□□ 0.72
BRF1-208ENST00000546997 RUFY2Q8WXA3 655 aa19.53■□□□□ 0.72
BRF1-208ENST00000546997 TMX4Q9H1E5 349 aaPredicted RBP19.53■□□□□ 0.72
BRF1-208ENST00000546997 WWC3Q9ULE0 1092 aa19.53■□□□□ 0.72
BRF1-208ENST00000546997 SOCS7O14512 581 aa19.53■□□□□ 0.72
BRF1-208ENST00000546997 IDH1O75874 414 aaKnown RBP19.53■□□□□ 0.72
BRF1-208ENST00000546997 TGFB2P61812 414 aa19.53■□□□□ 0.72
BRF1-208ENST00000546997 ZNF804AQ7Z570 1209 aa19.53■□□□□ 0.72
BRF1-208ENST00000546997 ZNF589Q86UQ0 364 aaPredicted RBP19.53■□□□□ 0.72
BRF1-208ENST00000546997 FAM13BQ9NYF5 915 aa19.53■□□□□ 0.72
BRF1-208ENST00000546997 JAG2Q9Y219 1238 aa19.53■□□□□ 0.72
BRF1-208ENST00000546997 SEMA3EO15041 775 aa19.52■□□□□ 0.72
BRF1-208ENST00000546997 RNF113AO15541 343 aaKnown RBP19.52■□□□□ 0.72
BRF1-208ENST00000546997 C21orf2O43822 256 aa19.52■□□□□ 0.72
BRF1-208ENST00000546997 SPON1Q9HCB6 807 aa19.52■□□□□ 0.72
BRF1-208ENST00000546997 DENND2AQ9ULE3 1009 aa19.52■□□□□ 0.72
BRF1-208ENST00000546997 RIMBP2O15034 1052 aa19.52■□□□□ 0.71
BRF1-208ENST00000546997 MAPK8IP2Q13387 824 aaPredicted RBP19.52■□□□□ 0.71
BRF1-208ENST00000546997 UTP14CQ5TAP6 766 aaKnown RBP19.52■□□□□ 0.71
BRF1-208ENST00000546997 CCDC88AQ3V6T2 1871 aa19.51■□□□□ 0.71
BRF1-208ENST00000546997 RBM10P98175 930 aaKnown RBP19.51■□□□□ 0.71
BRF1-208ENST00000546997 ZMYM1Q5SVZ6 1142 aa19.51■□□□□ 0.71
BRF1-208ENST00000546997 CCDC129Q6ZRS4 1044 aa19.51■□□□□ 0.71
BRF1-208ENST00000546997 TDRD7Q8NHU6 1098 aaKnown RBP19.51■□□□□ 0.71
BRF1-208ENST00000546997 CD209Q9NNX6 404 aa19.51■□□□□ 0.71
BRF1-208ENST00000546997 MCM2P49736 904 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 CHAF1AQ13111 956 aaPredicted RBP19.5■□□□□ 0.71
BRF1-208ENST00000546997 TICAM2Q86XR7 235 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 CD2APQ9Y5K6 639 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 PDS5AQ29RF7 1337 aaKnown RBP19.5■□□□□ 0.71
BRF1-208ENST00000546997 ADD2P35612 726 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 SLC9C2Q5TAH2 1124 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.5■□□□□ 0.71
BRF1-208ENST00000546997 PIM2Q9P1W9 311 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 ABCF2Q9UG63 623 aa19.5■□□□□ 0.71
BRF1-208ENST00000546997 MAST3O60307 1309 aa19.49■□□□□ 0.71
BRF1-208ENST00000546997 SCN9AQ15858 1988 aa19.49■□□□□ 0.71
BRF1-208ENST00000546997 PDE6AP16499 860 aa19.49■□□□□ 0.71
BRF1-208ENST00000546997 OSBP2Q969R2 916 aa19.49■□□□□ 0.71
BRF1-208ENST00000546997 MAST2Q6P0Q8 1798 aa19.49■□□□□ 0.71
BRF1-208ENST00000546997 M0R2C6 588 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 ZFYP08048 801 aaPredicted RBP19.48■□□□□ 0.71
BRF1-208ENST00000546997 IL1R1P14778 569 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 NCLP19338 710 aaKnown RBP19.48■□□□□ 0.71
BRF1-208ENST00000546997 PTH1RQ03431 593 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 MCMDC2Q4G0Z9 681 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 PRIMPOLQ96LW4 560 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 TCRBV5S4A2TA0A5A2 114 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 GPT2Q8TD30 523 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 RTFDC1Q9BY42 306 aaPredicted RBP19.48■□□□□ 0.71
BRF1-208ENST00000546997 ZC3H12CQ9C0D7 883 aaKnown RBP19.48■□□□□ 0.71
BRF1-208ENST00000546997 HELLSQ9NRZ9 838 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 LRP2BPQ9P2M1 347 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 SNX14Q9Y5W7 946 aa19.48■□□□□ 0.71
BRF1-208ENST00000546997 ZNF532Q9HCE3 1301 aa19.47■□□□□ 0.71
BRF1-208ENST00000546997 FER1L6Q2WGJ9 1857 aa19.47■□□□□ 0.71
BRF1-208ENST00000546997 HMGN5P82970 282 aaKnown RBP19.47■□□□□ 0.71
BRF1-208ENST00000546997 MAP3K12Q12852 859 aa19.47■□□□□ 0.71
BRF1-208ENST00000546997 LRRFIP1Q32MZ4 808 aaKnown RBP19.47■□□□□ 0.71
BRF1-208ENST00000546997 CC2D2BQ6DHV5 1058 aa19.47■□□□□ 0.71
BRF1-208ENST00000546997 NLGN2Q8NFZ4 835 aa19.47■□□□□ 0.71
BRF1-208ENST00000546997 CCDC94Q9BW85 323 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms