RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 GRIK5Q16478 980 aa18.27■□□□□ 0.52
CCDC38-205ENST00000546947 PRAMEF18Q5VWM3 479 aa18.27■□□□□ 0.52
CCDC38-205ENST00000546947 CCDC102BQ68D86 513 aa18.27■□□□□ 0.52
CCDC38-205ENST00000546947 RGMBQ6NW40 437 aa18.27■□□□□ 0.52
CCDC38-205ENST00000546947 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
CCDC38-205ENST00000546947 WBP1LQ9NX94 342 aa18.27■□□□□ 0.52
CCDC38-205ENST00000546947 CLRN2A0PK11 232 aa18.26■□□□□ 0.51
CCDC38-205ENST00000546947 ADORA1P30542 326 aa18.26■□□□□ 0.51
CCDC38-205ENST00000546947 MVPQ14764 893 aaKnown RBP18.26■□□□□ 0.51
CCDC38-205ENST00000546947 TEKT1Q969V4 418 aa18.26■□□□□ 0.51
CCDC38-205ENST00000546947 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
CCDC38-205ENST00000546947 XAGE2Q96GT9 111 aa18.26■□□□□ 0.51
CCDC38-205ENST00000546947 DEFB129Q9H1M3 183 aa18.26■□□□□ 0.51
CCDC38-205ENST00000546947 VEZTQ9HBM0 779 aa18.26■□□□□ 0.51
CCDC38-205ENST00000546947 SALL1Q9NSC2 1324 aa18.25■□□□□ 0.51
CCDC38-205ENST00000546947 AOC2O75106 756 aa18.25■□□□□ 0.51
CCDC38-205ENST00000546947 ZNF157P51786 506 aaPredicted RBP18.25■□□□□ 0.51
CCDC38-205ENST00000546947 NOGQ13253 232 aa18.25■□□□□ 0.51
CCDC38-205ENST00000546947 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
CCDC38-205ENST00000546947 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
CCDC38-205ENST00000546947 DDX19BQ9UMR2 479 aa18.25■□□□□ 0.51
CCDC38-205ENST00000546947 AOX1Q06278 1338 aa18.24■□□□□ 0.51
CCDC38-205ENST00000546947 PDS5AQ29RF7 1337 aaKnown RBP18.24■□□□□ 0.51
CCDC38-205ENST00000546947 TNFAIP1Q13829 316 aa18.24■□□□□ 0.51
CCDC38-205ENST00000546947 CEP85Q6P2H3 762 aa18.24■□□□□ 0.51
CCDC38-205ENST00000546947 ZDHHC15Q96MV8 337 aa18.24■□□□□ 0.51
CCDC38-205ENST00000546947 NEUROD6Q96NK8 337 aa18.24■□□□□ 0.51
CCDC38-205ENST00000546947 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
CCDC38-205ENST00000546947 TDRD3Q9H7E2 651 aaKnown RBP18.24■□□□□ 0.51
CCDC38-205ENST00000546947 ZNF70Q9UC06 446 aaPredicted RBP18.24■□□□□ 0.51
CCDC38-205ENST00000546947 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
CCDC38-205ENST00000546947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.24■□□□□ 0.51
CCDC38-205ENST00000546947 FAM155AB1AL88 458 aaPredicted RBP18.23■□□□□ 0.51
CCDC38-205ENST00000546947 FOXN1O15353 648 aa18.23■□□□□ 0.51
CCDC38-205ENST00000546947 SURF6O75683 361 aaKnown RBP18.23■□□□□ 0.51
CCDC38-205ENST00000546947 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
CCDC38-205ENST00000546947 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
CCDC38-205ENST00000546947 HHIPL2Q6UWX4 724 aa18.23■□□□□ 0.51
CCDC38-205ENST00000546947 ARMC9Q7Z3E5 817 aa18.23■□□□□ 0.51
CCDC38-205ENST00000546947 ZGPATQ8N5A5 531 aaKnown RBP18.23■□□□□ 0.51
CCDC38-205ENST00000546947 GPR108Q9NPR9 543 aa18.23■□□□□ 0.51
CCDC38-205ENST00000546947 COG6Q9Y2V7 657 aa18.23■□□□□ 0.51
CCDC38-205ENST00000546947 LDHBP07195 334 aaKnown RBP18.22■□□□□ 0.51
CCDC38-205ENST00000546947 SLC10A3P09131 477 aa18.22■□□□□ 0.51
CCDC38-205ENST00000546947 PDE3AQ14432 1141 aa18.22■□□□□ 0.51
CCDC38-205ENST00000546947 BEGAINQ9BUH8 593 aa18.22■□□□□ 0.51
CCDC38-205ENST00000546947 MYH2Q9UKX2 1941 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 UBE2Q2LH0YL09 131 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 PRDX5P30044 214 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 TNNI2P48788 182 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 CTCFP49711 727 aaPredicted RBP18.21■□□□□ 0.51
CCDC38-205ENST00000546947 RASGRF1Q13972 1273 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 RASA3Q14644 834 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 SUPT20HL1Q3ZLR7 823 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 GORABQ5T7V8 394 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 MOB2Q70IA6 237 aa18.21■□□□□ 0.51
CCDC38-205ENST00000546947 PPP1R12BO60237 982 aaPredicted RBP18.2■□□□□ 0.5
CCDC38-205ENST00000546947 KCNA4P22459 653 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 MAP3K11Q16584 847 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 TNNI3KQ59H18 835 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 RASAL3Q86YV0 1011 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 ZBTB40Q9NUA8 1239 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 TMOD2Q9NZR1 351 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 FPGT-TNNI3KV9GXZ4 949 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 SSC5DA1L4H1 1573 aa18.2■□□□□ 0.5
CCDC38-205ENST00000546947 AKAP11Q9UKA4 1901 aa18.19■□□□□ 0.5
CCDC38-205ENST00000546947 TCP10L2B9ZVM9 353 aa18.19■□□□□ 0.5
CCDC38-205ENST00000546947 ARID4AP29374 1257 aaPredicted RBP18.19■□□□□ 0.5
CCDC38-205ENST00000546947 APOBEC3HQ6NTF7 200 aaKnown RBP18.19■□□□□ 0.5
CCDC38-205ENST00000546947 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
CCDC38-205ENST00000546947 ANGEL1Q9UNK9 670 aaKnown RBP18.19■□□□□ 0.5
CCDC38-205ENST00000546947 CA12O43570 354 aa18.18■□□□□ 0.5
CCDC38-205ENST00000546947 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
CCDC38-205ENST00000546947 PRKG1Q13976 671 aa18.18■□□□□ 0.5
CCDC38-205ENST00000546947 NBPF12Q5TAG4 269 aaPredicted RBP18.18■□□□□ 0.5
CCDC38-205ENST00000546947 SPTY2D1Q68D10 685 aaPredicted RBP18.18■□□□□ 0.5
CCDC38-205ENST00000546947 REM2Q8IYK8 340 aaPredicted RBP18.18■□□□□ 0.5
CCDC38-205ENST00000546947 ZIC5Q96T25 663 aa18.18■□□□□ 0.5
CCDC38-205ENST00000546947 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
CCDC38-205ENST00000546947 UNCXA6NJT0 531 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 HMMRO75330 724 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 HSPA8P11142 646 aaKnown RBP18.17■□□□□ 0.5
CCDC38-205ENST00000546947 KIF23Q02241 960 aaPredicted RBP18.17■□□□□ 0.5
CCDC38-205ENST00000546947 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 LDLRAD1Q5T700 205 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 COL13A1Q5TAT6 717 aaPredicted RBP18.17■□□□□ 0.5
CCDC38-205ENST00000546947 FKBP1CQ5VVH2 108 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 FAM83AQ86UY5 434 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 SLF2Q8IX21 1173 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 HMG20BQ9P0W2 317 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 ABCF2Q9UG63 623 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 DAGLAQ9Y4D2 1042 aa18.17■□□□□ 0.5
CCDC38-205ENST00000546947 DIXDC1Q155Q3 683 aa18.16■□□□□ 0.5
CCDC38-205ENST00000546947 CCDC158Q5M9N0 1113 aa18.16■□□□□ 0.5
CCDC38-205ENST00000546947 C20orf194Q5TEA3 1177 aa18.16■□□□□ 0.5
CCDC38-205ENST00000546947 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
CCDC38-205ENST00000546947 DZIP1Q86YF9 867 aaKnown RBP18.16■□□□□ 0.5
CCDC38-205ENST00000546947 SPATA5Q8NB90 893 aa18.16■□□□□ 0.5
CCDC38-205ENST00000546947 TEPSINQ96N21 525 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms