RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 SLC10A4Q96EP9 437 aa23.43■■□□□ 1.34
CHERP-204ENST00000546538 IGF2BP3O00425 579 aaKnown RBP eCLIP23.42■■□□□ 1.34
CHERP-204ENST00000546538 PPP1R12BO60237 982 aaPredicted RBP23.42■■□□□ 1.34
CHERP-204ENST00000546538 SUPT20HL1Q3ZLR7 823 aa23.42■■□□□ 1.34
CHERP-204ENST00000546538 NOM1Q5C9Z4 860 aaKnown RBP23.42■■□□□ 1.34
CHERP-204ENST00000546538 ATG9AQ7Z3C6 839 aa23.42■■□□□ 1.34
CHERP-204ENST00000546538 EYA2O00167 538 aa23.41■■□□□ 1.34
CHERP-204ENST00000546538 ZBTB48P10074 688 aaPredicted RBP23.41■■□□□ 1.34
CHERP-204ENST00000546538 SOX10P56693 466 aa23.41■■□□□ 1.34
CHERP-204ENST00000546538 IFNL1Q8IU54 200 aa23.41■■□□□ 1.34
CHERP-204ENST00000546538 TMEM39BQ9GZU3 492 aa23.41■■□□□ 1.34
CHERP-204ENST00000546538 NOB1Q9ULX3 412 aaKnown RBP23.41■■□□□ 1.34
CHERP-204ENST00000546538 TCP10L2B9ZVM9 353 aa23.4■■□□□ 1.34
CHERP-204ENST00000546538 CACNB3P54284 484 aa23.4■■□□□ 1.34
CHERP-204ENST00000546538 PUM3Q15397 648 aaKnown RBP23.4■■□□□ 1.34
CHERP-204ENST00000546538 VPS37DQ86XT2 251 aa23.4■■□□□ 1.34
CHERP-204ENST00000546538 HPS5Q9UPZ3 1129 aa23.4■■□□□ 1.34
CHERP-204ENST00000546538 KIF16BQ96L93 1317 aa23.39■■□□□ 1.34
CHERP-204ENST00000546538 BRCA2P51587 3418 aa23.39■■□□□ 1.34
CHERP-204ENST00000546538 MANSC4A6NHS7 340 aaPredicted RBP23.39■■□□□ 1.33
CHERP-204ENST00000546538 CAVIN4Q5BKX8 364 aa23.39■■□□□ 1.33
CHERP-204ENST00000546538 UNCXA6NJT0 531 aa23.38■■□□□ 1.33
CHERP-204ENST00000546538 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.38■■□□□ 1.33
CHERP-204ENST00000546538 CNKSR2Q8WXI2 1034 aa23.38■■□□□ 1.33
CHERP-204ENST00000546538 PTPN18Q99952 460 aa23.38■■□□□ 1.33
CHERP-204ENST00000546538 IREB2P48200 963 aaKnown RBP23.37■■□□□ 1.33
CHERP-204ENST00000546538 HDLBPQ00341 1268 aaKnown RBP23.37■■□□□ 1.33
CHERP-204ENST00000546538 TNFAIP1Q13829 316 aa23.37■■□□□ 1.33
CHERP-204ENST00000546538 APOBEC3HQ6NTF7 200 aaKnown RBP23.37■■□□□ 1.33
CHERP-204ENST00000546538 TBC1D22AQ8WUA7 517 aa23.37■■□□□ 1.33
CHERP-204ENST00000546538 MKI67P46013 3256 aaKnown RBP23.36■■□□□ 1.33
CHERP-204ENST00000546538 ANKRD13AQ8IZ07 590 aa23.36■■□□□ 1.33
CHERP-204ENST00000546538 ZDHHC15Q96MV8 337 aa23.36■■□□□ 1.33
CHERP-204ENST00000546538 ELP3Q9H9T3 547 aa23.36■■□□□ 1.33
CHERP-204ENST00000546538 MYH13Q9UKX3 1938 aa23.36■■□□□ 1.33
CHERP-204ENST00000546538 FKTNO75072 461 aa23.35■■□□□ 1.33
CHERP-204ENST00000546538 CAP1Q01518 475 aa23.35■■□□□ 1.33
CHERP-204ENST00000546538 SIL1Q9H173 461 aa23.35■■□□□ 1.33
CHERP-204ENST00000546538 PDE4DIPQ5VU43 2346 aa23.35■■□□□ 1.33
CHERP-204ENST00000546538 TESPA1A2RU30 521 aaPredicted RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 FRAT2O75474 233 aaPredicted RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 IFIT1P09914 478 aaKnown RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 CT47B1P0C2W7 299 aaPredicted RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 UBTFL1P0CB47 393 aaPredicted RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 RARSP54136 660 aaKnown RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 INHBEP58166 350 aa23.34■■□□□ 1.33
CHERP-204ENST00000546538 LPIN2Q92539 896 aa23.34■■□□□ 1.33
CHERP-204ENST00000546538 TEKT1Q969V4 418 aa23.34■■□□□ 1.33
CHERP-204ENST00000546538 MS4A4AQ96JQ5 239 aa23.34■■□□□ 1.33
CHERP-204ENST00000546538 MEIS3Q99687 375 aa23.34■■□□□ 1.33
CHERP-204ENST00000546538 PA2G4Q9UQ80 394 aaKnown RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 LRRFIP2Q9Y608 721 aaKnown RBP23.34■■□□□ 1.33
CHERP-204ENST00000546538 CCER2I3L3R5 266 aa23.33■■□□□ 1.33
CHERP-204ENST00000546538 VGLL4Q14135 290 aa23.33■■□□□ 1.33
CHERP-204ENST00000546538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.33■■□□□ 1.33
CHERP-204ENST00000546538 OPTNQ96CV9 577 aa23.33■■□□□ 1.33
CHERP-204ENST00000546538 MRIQ9BWK5 157 aa23.33■■□□□ 1.33
CHERP-204ENST00000546538 ALDH1A1P00352 501 aa23.33■■□□□ 1.32
CHERP-204ENST00000546538 PKN2Q16513 984 aaKnown RBP23.33■■□□□ 1.32
CHERP-204ENST00000546538 CIAO1O76071 339 aa23.32■■□□□ 1.32
CHERP-204ENST00000546538 SLC5A1P13866 664 aa23.32■■□□□ 1.32
CHERP-204ENST00000546538 CRHR2Q13324 411 aa23.32■■□□□ 1.32
CHERP-204ENST00000546538 SUGT1Q9Y2Z0 365 aa23.32■■□□□ 1.32
CHERP-204ENST00000546538 API5Q9BZZ5 524 aaKnown RBP23.31■■□□□ 1.32
CHERP-204ENST00000546538 TNNQ9UQP3 1299 aa23.31■■□□□ 1.32
CHERP-204ENST00000546538 TNNI2P48788 182 aa23.3■■□□□ 1.32
CHERP-204ENST00000546538 MAP3K9P80192 1104 aa23.3■■□□□ 1.32
CHERP-204ENST00000546538 DIXDC1Q155Q3 683 aa23.3■■□□□ 1.32
CHERP-204ENST00000546538 FBXO46Q6PJ61 603 aaPredicted RBP23.3■■□□□ 1.32
CHERP-204ENST00000546538 HHIPL2Q6UWX4 724 aa23.3■■□□□ 1.32
CHERP-204ENST00000546538 BRI3BPQ8WY22 251 aa23.3■■□□□ 1.32
CHERP-204ENST00000546538 PRDX5P30044 214 aa23.29■■□□□ 1.32
CHERP-204ENST00000546538 ADORA1P30542 326 aa23.29■■□□□ 1.32
CHERP-204ENST00000546538 PHKA1P46020 1223 aa23.29■■□□□ 1.32
CHERP-204ENST00000546538 ATP2B3Q16720 1220 aa23.29■■□□□ 1.32
CHERP-204ENST00000546538 FBXO3Q9UK99 471 aa23.29■■□□□ 1.32
CHERP-204ENST00000546538 DAGLAQ9Y4D2 1042 aa23.29■■□□□ 1.32
CHERP-204ENST00000546538 SNCAIPQ9Y6H5 919 aa23.29■■□□□ 1.32
CHERP-204ENST00000546538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.29■■□□□ 1.32
CHERP-204ENST00000546538 FKBP1CQ5VVH2 108 aa23.28■■□□□ 1.32
CHERP-204ENST00000546538 FAM83AQ86UY5 434 aa23.28■■□□□ 1.32
CHERP-204ENST00000546538 COPRSQ9NQ92 184 aa23.28■■□□□ 1.32
CHERP-204ENST00000546538 MAST3O60307 1309 aa23.27■■□□□ 1.32
CHERP-204ENST00000546538 INTS3Q68E01 1043 aaKnown RBP23.27■■□□□ 1.32
CHERP-204ENST00000546538 OTOP1Q7RTM1 612 aa23.27■■□□□ 1.32
CHERP-204ENST00000546538 WDR66Q8TBY9 1149 aa23.27■■□□□ 1.32
CHERP-204ENST00000546538 RPAP1Q9BWH6 1393 aaPredicted RBP23.26■■□□□ 1.31
CHERP-204ENST00000546538 NFIAQ12857 509 aa23.26■■□□□ 1.31
CHERP-204ENST00000546538 ZKSCAN4Q969J2 545 aaPredicted RBP23.26■■□□□ 1.31
CHERP-204ENST00000546538 CEP126Q9P2H0 1117 aa23.26■■□□□ 1.31
CHERP-204ENST00000546538 SPDYE5A6NIY4 337 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 IL15P40933 162 aaPredicted RBP23.25■■□□□ 1.31
CHERP-204ENST00000546538 CDC42EP5Q6NZY7 148 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 OTUD5Q96G74 571 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 TRIM17Q9Y577 477 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 FAM43AQ8N2R8 423 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 CD99L2Q8TCZ2 262 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 ARHGAP45Q92619 1136 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 WRNIP1Q96S55 665 aa23.25■■□□□ 1.31
CHERP-204ENST00000546538 SALL1Q9NSC2 1324 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms