RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 WBP1LQ9NX94 342 aa16.09■□□□□ 0.17
LINC00661-201ENST00000546512 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
LINC00661-201ENST00000546512 MAST3O60307 1309 aa16.09■□□□□ 0.17
LINC00661-201ENST00000546512 SEMA3EO15041 775 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 FOXN1O15353 648 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 SURF6O75683 361 aaKnown RBP16.08■□□□□ 0.16
LINC00661-201ENST00000546512 ZNF157P51786 506 aaPredicted RBP16.08■□□□□ 0.16
LINC00661-201ENST00000546512 HDLBPQ00341 1268 aaKnown RBP16.08■□□□□ 0.16
LINC00661-201ENST00000546512 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
LINC00661-201ENST00000546512 TTLL12Q14166 644 aaPredicted RBP16.08■□□□□ 0.16
LINC00661-201ENST00000546512 MVPQ14764 893 aaKnown RBP16.08■□□□□ 0.16
LINC00661-201ENST00000546512 MOB2Q70IA6 237 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 TEKT1Q969V4 418 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 XAGE2Q96GT9 111 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 NEUROD6Q96NK8 337 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 ZNF70Q9UC06 446 aaPredicted RBP16.08■□□□□ 0.16
LINC00661-201ENST00000546512 DENND2AQ9ULE3 1009 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 COG6Q9Y2V7 657 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 PPP2R3BQ9Y5P8 575 aa16.08■□□□□ 0.16
LINC00661-201ENST00000546512 NOGQ13253 232 aa16.07■□□□□ 0.16
LINC00661-201ENST00000546512 SPDYE2Q495Y8 402 aa16.07■□□□□ 0.16
LINC00661-201ENST00000546512 CEP85Q6P2H3 762 aa16.07■□□□□ 0.16
LINC00661-201ENST00000546512 CCDC102AQ96A19 550 aa16.07■□□□□ 0.16
LINC00661-201ENST00000546512 FAM155AB1AL88 458 aaPredicted RBP16.06■□□□□ 0.16
LINC00661-201ENST00000546512 UBE2Q2LH0YL09 131 aa16.06■□□□□ 0.16
LINC00661-201ENST00000546512 TNFAIP1Q13829 316 aa16.06■□□□□ 0.16
LINC00661-201ENST00000546512 RASGRF1Q13972 1273 aa16.06■□□□□ 0.16
LINC00661-201ENST00000546512 PRKG1Q13976 671 aa16.06■□□□□ 0.16
LINC00661-201ENST00000546512 GORABQ5T7V8 394 aa16.06■□□□□ 0.16
LINC00661-201ENST00000546512 BEGAINQ9BUH8 593 aa16.06■□□□□ 0.16
LINC00661-201ENST00000546512 DDX19BQ9UMR2 479 aa16.06■□□□□ 0.16
LINC00661-201ENST00000546512 SALL1Q9NSC2 1324 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 ZBTB22O15209 634 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 LDHBP07195 334 aaKnown RBP16.05■□□□□ 0.16
LINC00661-201ENST00000546512 SLC10A3P09131 477 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 PRDX5P30044 214 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 CTCFP49711 727 aaPredicted RBP16.05■□□□□ 0.16
LINC00661-201ENST00000546512 RASA3Q14644 834 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 ARMC9Q7Z3E5 817 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
LINC00661-201ENST00000546512 ZDHHC15Q96MV8 337 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 MRIQ9BWK5 157 aa16.05■□□□□ 0.16
LINC00661-201ENST00000546512 TCP10L2B9ZVM9 353 aa16.04■□□□□ 0.16
LINC00661-201ENST00000546512 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
LINC00661-201ENST00000546512 TNNI3KQ59H18 835 aa16.04■□□□□ 0.16
LINC00661-201ENST00000546512 COL13A1Q5TAT6 717 aaPredicted RBP16.04■□□□□ 0.16
LINC00661-201ENST00000546512 HHIPL2Q6UWX4 724 aa16.04■□□□□ 0.16
LINC00661-201ENST00000546512 ZIC5Q96T25 663 aa16.04■□□□□ 0.16
LINC00661-201ENST00000546512 GPR108Q9NPR9 543 aa16.04■□□□□ 0.16
LINC00661-201ENST00000546512 NOP58Q9Y2X3 529 aaKnown RBP16.04■□□□□ 0.16
LINC00661-201ENST00000546512 FPGT-TNNI3KV9GXZ4 949 aa16.04■□□□□ 0.16
LINC00661-201ENST00000546512 PDS5AQ29RF7 1337 aaKnown RBP16.03■□□□□ 0.16
LINC00661-201ENST00000546512 TNNI2P48788 182 aa16.03■□□□□ 0.16
LINC00661-201ENST00000546512 DIXDC1Q155Q3 683 aa16.03■□□□□ 0.16
LINC00661-201ENST00000546512 NBPF12Q5TAG4 269 aaPredicted RBP16.03■□□□□ 0.16
LINC00661-201ENST00000546512 APOBEC3HQ6NTF7 200 aaKnown RBP16.03■□□□□ 0.16
LINC00661-201ENST00000546512 RASAL3Q86YV0 1011 aa16.03■□□□□ 0.16
LINC00661-201ENST00000546512 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
LINC00661-201ENST00000546512 YTHDC1Q96MU7 727 aaKnown RBP16.03■□□□□ 0.16
LINC00661-201ENST00000546512 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
LINC00661-201ENST00000546512 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
LINC00661-201ENST00000546512 ANGEL1Q9UNK9 670 aaKnown RBP16.03■□□□□ 0.16
LINC00661-201ENST00000546512 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
LINC00661-201ENST00000546512 SSC5DA1L4H1 1573 aa16.03■□□□□ 0.16
LINC00661-201ENST00000546512 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.16
LINC00661-201ENST00000546512 CACNB3P54284 484 aa16.02■□□□□ 0.16
LINC00661-201ENST00000546512 KIF23Q02241 960 aaPredicted RBP16.02■□□□□ 0.16
LINC00661-201ENST00000546512 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
LINC00661-201ENST00000546512 C20orf194Q5TEA3 1177 aa16.02■□□□□ 0.16
LINC00661-201ENST00000546512 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
LINC00661-201ENST00000546512 ABCF2Q9UG63 623 aa16.02■□□□□ 0.16
LINC00661-201ENST00000546512 DAGLAQ9Y4D2 1042 aa16.02■□□□□ 0.16
LINC00661-201ENST00000546512 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
LINC00661-201ENST00000546512 ARID4AP29374 1257 aaPredicted RBP16.01■□□□□ 0.15
LINC00661-201ENST00000546512 LBX1P52954 281 aa16.01■□□□□ 0.15
LINC00661-201ENST00000546512 DZIP1Q86YF9 867 aaKnown RBP16.01■□□□□ 0.15
LINC00661-201ENST00000546512 TMEM39BQ9GZU3 492 aa16.01■□□□□ 0.15
LINC00661-201ENST00000546512 HMG20BQ9P0W2 317 aa16.01■□□□□ 0.15
LINC00661-201ENST00000546512 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
LINC00661-201ENST00000546512 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
LINC00661-201ENST00000546512 MAP3K11Q16584 847 aa16■□□□□ 0.15
LINC00661-201ENST00000546512 LDLRAD1Q5T700 205 aa16■□□□□ 0.15
LINC00661-201ENST00000546512 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
LINC00661-201ENST00000546512 PI16Q6UXB8 463 aa16■□□□□ 0.15
LINC00661-201ENST00000546512 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
LINC00661-201ENST00000546512 SPATA5Q8NB90 893 aa16■□□□□ 0.15
LINC00661-201ENST00000546512 TEPSINQ96N21 525 aa16■□□□□ 0.15
LINC00661-201ENST00000546512 DBNDD2Q9BQY9 259 aa16■□□□□ 0.15
LINC00661-201ENST00000546512 CA12O43570 354 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 MCAMP43121 646 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 CCDC158Q5M9N0 1113 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 TTC39AQ5SRH9 613 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 FKBP1CQ5VVH2 108 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 ERC1Q8IUD2 1116 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 CDAN1Q8IWY9 1227 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 PRDM10Q9NQV6 1147 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.99■□□□□ 0.15
LINC00661-201ENST00000546512 TSKSQ9UJT2 592 aa15.99■□□□□ 0.15
LINC00661-201ENST00000546512 HMMRO75330 724 aa15.98■□□□□ 0.15
LINC00661-201ENST00000546512 USP2O75604 605 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms