RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 CAPRIN2Q6IMN6 1127 aaKnown RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 TCP11Q8WWU5 503 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 CLIC6Q96NY7 704 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 LSG1Q9H089 658 aaKnown RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 CCDC8Q9H0W5 538 aaPredicted RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 EHD4Q9H223 541 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 ZNHIT6Q9NWK9 470 aaKnown RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 ERBB3P21860 1342 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 PTPDC1A2A3K4 754 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 STX10O60499 249 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 RRP12Q5JTH9 1297 aaKnown RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 KCNG4Q8TDN1 519 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 INCENPQ9NQS7 918 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 L1RE1Q9UN81 338 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 SOWAHDA6NJG2 315 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 TUBB2AQ13885 445 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 CCDC102BQ68D86 513 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 TBC1D22AQ8WUA7 517 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 TTC14Q96N46 770 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 SLF1Q9BQI6 1058 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 TUBB2BQ9BVA1 445 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 GOLPH3LQ9H4A5 285 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 TPX2Q9ULW0 747 aaKnown RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 LRRIQ3A6PVS8 624 aaPredicted RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 MEFVO15553 781 aaPredicted RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 SPATS2Q86XZ4 545 aaKnown RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 ZKSCAN4Q969J2 545 aaPredicted RBP11.72□□□□□ -0.53
SOD2-216ENST00000546260 NFE2L3Q9Y4A8 694 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 PLXNC1O60486 1568 aa11.72□□□□□ -0.53
SOD2-216ENST00000546260 NEFHP12036 1026 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 PAFAH1B1P43034 410 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 HSP90AB2PQ58FF8 381 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 ARMC3Q5W041 872 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 G2E3Q7L622 706 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 PARP9Q8IXQ6 854 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.53
SOD2-216ENST00000546260 ZSWIM6Q9HCJ5 1215 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 ECHDC1Q9NTX5 307 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 ETAA1Q9NY74 926 aa11.71□□□□□ -0.53
SOD2-216ENST00000546260 HIBCHQ6NVY1 386 aaPredicted RBP11.71□□□□□ -0.54
SOD2-216ENST00000546260 DPF2Q92785 391 aa11.71□□□□□ -0.54
SOD2-216ENST00000546260 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.54
SOD2-216ENST00000546260 N4BP3O15049 544 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 YEATS4O95619 227 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 MRPS25P82663 173 aaKnown RBP11.7□□□□□ -0.54
SOD2-216ENST00000546260 COG3Q96JB2 828 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 PLEKHF1Q96S99 279 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 PCDHA7Q9UN72 937 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 GOLGA8KD6RF30 607 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 SLC27A2O14975 620 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 RPS6KB1P23443 525 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 PCK1P35558 622 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 MTF1Q14872 753 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 NFXL1Q6ZNB6 911 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 STAG1Q8WVM7 1258 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 LTV1Q96GA3 475 aaPredicted RBP11.7□□□□□ -0.54
SOD2-216ENST00000546260 CPP00450 1065 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 MXRA7P84157 204 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 RRS1Q15050 365 aaKnown RBP11.7□□□□□ -0.54
SOD2-216ENST00000546260 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 RSRC2Q7L4I2 434 aaKnown RBP11.7□□□□□ -0.54
SOD2-216ENST00000546260 VSTM4Q8IW00 320 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 PSMB7Q99436 277 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 FAM167BQ9BTA0 163 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 IL25Q9H293 177 aa11.7□□□□□ -0.54
SOD2-216ENST00000546260 NCOA5Q9HCD5 579 aaKnown RBP11.7□□□□□ -0.54
SOD2-216ENST00000546260 TTF2Q9UNY4 1162 aaKnown RBP11.7□□□□□ -0.54
SOD2-216ENST00000546260 MAP2K7O14733 419 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 CLSTN1O94985 981 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 CCNHP51946 323 aaPredicted RBP11.69□□□□□ -0.54
SOD2-216ENST00000546260 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 CCDC113Q9H0I3 377 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 TMX4Q9H1E5 349 aaPredicted RBP11.69□□□□□ -0.54
SOD2-216ENST00000546260 PDHBP11177 359 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 PNOCQ13519 176 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
SOD2-216ENST00000546260 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 A6NNZ2 444 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 FLIIQ13045 1269 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 TUBB8Q3ZCM7 444 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 EVI5LQ96CN4 794 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 PPP1R12CQ9BZL4 782 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 TTC21AQ8NDW8 1320 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 RPS6KA5O75582 802 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 SNUPNO95149 360 aaKnown RBP11.69□□□□□ -0.54
SOD2-216ENST00000546260 RBM5P52756 815 aaKnown RBP eCLIP11.69□□□□□ -0.54
SOD2-216ENST00000546260 EFCAB2Q5VUJ9 269 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 CHST3Q7LGC8 479 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 ACRBPQ8NEB7 543 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 GOPCQ9HD26 462 aa11.69□□□□□ -0.54
SOD2-216ENST00000546260 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.69□□□□□ -0.54
SOD2-216ENST00000546260 SH3BP1Q9Y3L3 701 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms