RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 MYO1BO43795 1136 aa15.88■□□□□ 0.13
COPS7A-221ENST00000546229 CRHR2Q13324 411 aa15.88■□□□□ 0.13
COPS7A-221ENST00000546229 SUPT20HL1Q3ZLR7 823 aa15.88■□□□□ 0.13
COPS7A-221ENST00000546229 TAF7LQ5H9L4 462 aa15.88■□□□□ 0.13
COPS7A-221ENST00000546229 SLC4A10Q6U841 1118 aa15.88■□□□□ 0.13
COPS7A-221ENST00000546229 TDRD3Q9H7E2 651 aaKnown RBP15.88■□□□□ 0.13
COPS7A-221ENST00000546229 MROH5Q6ZUA9 1318 aa15.88■□□□□ 0.13
COPS7A-221ENST00000546229 FGFR2P21802 821 aa15.87■□□□□ 0.13
COPS7A-221ENST00000546229 CRKP46108 304 aa15.87■□□□□ 0.13
COPS7A-221ENST00000546229 IREB2P48200 963 aaKnown RBP15.87■□□□□ 0.13
COPS7A-221ENST00000546229 PRPF38BQ5VTL8 546 aaKnown RBP15.87■□□□□ 0.13
COPS7A-221ENST00000546229 ANKRD13AQ8IZ07 590 aa15.87■□□□□ 0.13
COPS7A-221ENST00000546229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.87■□□□□ 0.13
COPS7A-221ENST00000546229 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
COPS7A-221ENST00000546229 TMEM39BQ9GZU3 492 aa15.87■□□□□ 0.13
COPS7A-221ENST00000546229 KIF16BQ96L93 1317 aa15.87■□□□□ 0.13
COPS7A-221ENST00000546229 ZNF316A6NFI3 1004 aaPredicted RBP15.86■□□□□ 0.13
COPS7A-221ENST00000546229 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
COPS7A-221ENST00000546229 KLHDC4Q8TBB5 520 aa15.86■□□□□ 0.13
COPS7A-221ENST00000546229 USP44Q9H0E7 712 aa15.86■□□□□ 0.13
COPS7A-221ENST00000546229 RPAP1Q9BWH6 1393 aaPredicted RBP15.86■□□□□ 0.13
COPS7A-221ENST00000546229 PDE8BO95263 885 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 HDLBPQ00341 1268 aaKnown RBP15.85■□□□□ 0.13
COPS7A-221ENST00000546229 TNFAIP1Q13829 316 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 VGLL4Q14135 290 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 FAM9BQ8IZU0 186 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 BRI3BPQ8WY22 251 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 SSH1Q8WYL5 1049 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 OPTNQ96CV9 577 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 ELP3Q9H9T3 547 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 IQSEC3Q9UPP2 1182 aaPredicted RBP15.85■□□□□ 0.13
COPS7A-221ENST00000546229 PTPRCP08575 1304 aa15.85■□□□□ 0.13
COPS7A-221ENST00000546229 RBM5P52756 815 aaKnown RBP eCLIP15.84■□□□□ 0.13
COPS7A-221ENST00000546229 APOBEC3HQ6NTF7 200 aaKnown RBP15.84■□□□□ 0.13
COPS7A-221ENST00000546229 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
COPS7A-221ENST00000546229 TRIM17Q9Y577 477 aa15.84■□□□□ 0.13
COPS7A-221ENST00000546229 SNCAIPQ9Y6H5 919 aa15.84■□□□□ 0.13
COPS7A-221ENST00000546229 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
COPS7A-221ENST00000546229 TCP10L2B9ZVM9 353 aa15.83■□□□□ 0.12
COPS7A-221ENST00000546229 CACNB3P54284 484 aa15.83■□□□□ 0.12
COPS7A-221ENST00000546229 ARMC5Q96C12 935 aa15.83■□□□□ 0.12
COPS7A-221ENST00000546229 ZDHHC15Q96MV8 337 aa15.83■□□□□ 0.12
COPS7A-221ENST00000546229 PTPN22Q9Y2R2 807 aa15.83■□□□□ 0.12
COPS7A-221ENST00000546229 KIAA0100Q14667 2235 aaKnown RBP15.83■□□□□ 0.12
COPS7A-221ENST00000546229 BCAMP50895 628 aa15.82■□□□□ 0.12
COPS7A-221ENST00000546229 METTL24Q5JXM2 366 aa15.82■□□□□ 0.12
COPS7A-221ENST00000546229 TBC1D22AQ8WUA7 517 aa15.82■□□□□ 0.12
COPS7A-221ENST00000546229 MRIQ9BWK5 157 aa15.82■□□□□ 0.12
COPS7A-221ENST00000546229 SPDYE5A6NIY4 337 aa15.81■□□□□ 0.12
COPS7A-221ENST00000546229 CHAF1AQ13111 956 aaPredicted RBP15.81■□□□□ 0.12
COPS7A-221ENST00000546229 RFX7Q2KHR2 1363 aa15.81■□□□□ 0.12
COPS7A-221ENST00000546229 FKBP1CQ5VVH2 108 aa15.81■□□□□ 0.12
COPS7A-221ENST00000546229 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
COPS7A-221ENST00000546229 FAM43AQ8N2R8 423 aa15.81■□□□□ 0.12
COPS7A-221ENST00000546229 ATRNL1Q5VV63 1379 aa15.8■□□□□ 0.12
COPS7A-221ENST00000546229 SLFN5Q08AF3 891 aa15.8■□□□□ 0.12
COPS7A-221ENST00000546229 PUM3Q15397 648 aaKnown RBP15.8■□□□□ 0.12
COPS7A-221ENST00000546229 FAM83AQ86UY5 434 aa15.8■□□□□ 0.12
COPS7A-221ENST00000546229 TRMT2AQ8IZ69 625 aaKnown RBP15.8■□□□□ 0.12
COPS7A-221ENST00000546229 TEKT1Q969V4 418 aa15.8■□□□□ 0.12
COPS7A-221ENST00000546229 ERO1AQ96HE7 468 aa15.8■□□□□ 0.12
COPS7A-221ENST00000546229 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
COPS7A-221ENST00000546229 SUGT1Q9Y2Z0 365 aa15.8■□□□□ 0.12
COPS7A-221ENST00000546229 E9PSI1 815 aa15.79■□□□□ 0.12
COPS7A-221ENST00000546229 MAP3K9P80192 1104 aa15.79■□□□□ 0.12
COPS7A-221ENST00000546229 SP3Q02447 781 aa15.79■□□□□ 0.12
COPS7A-221ENST00000546229 DOCK2Q92608 1830 aa15.79■□□□□ 0.12
COPS7A-221ENST00000546229 ADGRA2Q96PE1 1338 aa15.78■□□□□ 0.12
COPS7A-221ENST00000546229 CCL15-CCL14A0A0B4J2E2 113 aa15.78■□□□□ 0.12
COPS7A-221ENST00000546229 EYA2O00167 538 aa15.78■□□□□ 0.12
COPS7A-221ENST00000546229 ZBTB22O15209 634 aa15.78■□□□□ 0.12
COPS7A-221ENST00000546229 CCL15Q16663 113 aa15.78■□□□□ 0.12
COPS7A-221ENST00000546229 HHIPL2Q6UWX4 724 aa15.78■□□□□ 0.12
COPS7A-221ENST00000546229 OTUD5Q96G74 571 aa15.78■□□□□ 0.12
COPS7A-221ENST00000546229 TNNI2P48788 182 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 GTF2A2P52657 109 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 MOGSQ13724 837 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 ALDH1L2Q3SY69 923 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 INTS3Q68E01 1043 aaKnown RBP15.77■□□□□ 0.12
COPS7A-221ENST00000546229 OTUD7BQ6GQQ9 843 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 ZNF333Q96JL9 665 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 EFCC1Q9HA90 598 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 DAGLAQ9Y4D2 1042 aa15.77■□□□□ 0.12
COPS7A-221ENST00000546229 RANBP2P49792 3224 aaKnown RBP15.77■□□□□ 0.11
COPS7A-221ENST00000546229 PTPRFP10586 1907 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 MAST3O60307 1309 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 PHIPQ8WWQ0 1821 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
COPS7A-221ENST00000546229 VPS37DQ86XT2 251 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 LPIN2Q92539 896 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
COPS7A-221ENST00000546229 CDCA7LQ96GN5 454 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 WRNIP1Q96S55 665 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 ZCCHC17Q9NP64 241 aaKnown RBP15.76■□□□□ 0.11
COPS7A-221ENST00000546229 ZNF112Q9UJU3 913 aa15.76■□□□□ 0.11
COPS7A-221ENST00000546229 BTBD19C9JJ37 291 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 IRF6O14896 467 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 PRDX5P30044 214 aa15.75■□□□□ 0.11
COPS7A-221ENST00000546229 NFIAQ12857 509 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms