RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, human

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEK6-215	ENST00000546191	RPS6KA5	O75582	802 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	TBC1D8	O95759	1140 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	IGKV5-2	P06315	115 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	CAST	P20810	708 aa	Known RBP	11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	KLHL23	Q8NBE8	558 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	RUFY2	Q8WXA3	655 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	KCNB2	Q92953	911 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	METTL22	Q9BUU2	404 aa	Predicted RBP	11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	SHANK3	Q9BYB0	1731 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	EME2	A4GXA9	379 aa	Predicted RBP	11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	SNRPA1	P09661	255 aa	Known RBP	11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	NEXN	Q0ZGT2	675 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	SLC39A6	Q13433	755 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	VPS72	Q15906	364 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	ARMC3	Q5W041	872 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	QTRT2	Q9H974	415 aa	Known RBP	11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	CPSF2	Q9P2I0	782 aa	Known RBP	11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	CCDC171	Q6TFL3	1326 aa		11.34	□□□□□ -0.59
NEK6-215	ENST00000546191	NEURL1B	A8MQ27	555 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	ATP8B1	O43520	1251 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	KIN	O60870	393 aa	Known RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	BRD1	O95696	1058 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	IFIT2	P09913	472 aa	Known RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	PSMD2	Q13200	908 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	RIC3	Q7Z5B4	369 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	CACTIN	Q8WUQ7	758 aa	Known RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	EVI5L	Q96CN4	794 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	ZNF496	Q96IT1	587 aa	Predicted RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	FUCA2	Q9BTY2	467 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	BICC1	Q9H694	974 aa	Known RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	VEZT	Q9HBM0	779 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	ANKRD18B	A2A2Z9	1011 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	CYP27B1	O15528	508 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	AP1G2	O75843	785 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	GRIK3	Q13003	919 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	GCKR	Q14397	625 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	USP48	Q86UV5	1035 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	DRC7	Q8IY82	874 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	N4BP2L2	Q92802	583 aa	Predicted RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	TRIM6	Q9C030	488 aa	Predicted RBP	11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	DISP2	A7MBM2	1401 aa		11.33	□□□□□ -0.6
NEK6-215	ENST00000546191	SASH1	O94885	1247 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	GCFC2	P16383	781 aa	Known RBP	11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	FAM182B	Q5T319	152 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	FILIP1	Q7Z7B0	1213 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	TRIM74	Q86UV6	250 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	TRIM73	Q86UV7	250 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	CTCFL	Q8NI51	663 aa	Predicted RBP	11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	XAGE3	Q8WTP9	111 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	TTC14	Q96N46	770 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	FMNL2	Q96PY5	1086 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	SNRK	Q9NRH2	765 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	PA2G4	Q9UQ80	394 aa	Known RBP	11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	SNX14	Q9Y5W7	946 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	LAMB4	A4D0S4	1761 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	HIP1	O00291	1037 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	MAP4K4	O95819	1239 aa	Predicted RBP	11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	USP8	P40818	1118 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	SCRN1	Q12765	414 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	AIMP1	Q12904	312 aa	Known RBP	11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	NEDD9	Q14511	834 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	SF3A1	Q15459	793 aa	Known RBP	11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	TTC5	Q8N0Z6	440 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	SH3GL3	Q99963	347 aa		11.32	□□□□□ -0.6
NEK6-215	ENST00000546191	ERLIN2	O94905	339 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	FBXW10	Q5XX13	1052 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	COPS6	Q7L5N1	327 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	AACS	Q86V21	672 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	GJD4	Q96KN9	370 aa	Predicted RBP	11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	ORC3	Q9UBD5	711 aa	Predicted RBP	11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	MKRN1	Q9UHC7	482 aa	Known RBP	11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	MCM8	Q9UJA3	840 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191		H3BQF6	201 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	WWC2	Q6AWC2	1192 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	GIMAP6	Q6P9H5	292 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	ANKRD13D	Q6ZTN6	518 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	TM6SF1	Q9BZW5	370 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	KDM4C	Q9H3R0	1056 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	L2HGDH	Q9H9P8	463 aa		11.31	□□□□□ -0.6
NEK6-215	ENST00000546191	ECEL1	O95672	775 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	RWDD2B	P57060	319 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	TRAF1	Q13077	416 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	TBC1D25	Q3MII6	688 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	UPF3B	Q9BZI7	483 aa	Known RBP	11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	A1CF	Q9NQ94	594 aa	Known RBP	11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	IL2RB	P14784	551 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	RABL6	Q3YEC7	729 aa	Predicted RBP	11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	TMTC2	Q8N394	836 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	EAF2	Q96CJ1	260 aa	Predicted RBP	11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	PLEKHA4	Q9H4M7	779 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	COPRS	Q9NQ92	184 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	TRPC5	Q9UL62	973 aa	Predicted RBP	11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	USP16	Q9Y5T5	823 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	BRWD3	Q6RI45	1802 aa		11.3	□□□□□ -0.6
NEK6-215	ENST00000546191	ELP1	O95163	1332 aa		11.3	□□□□□ -0.6

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